MGE detailed information
MGE type: Genomic_island MGE length: 23513 bp
Accession: NZ_CP042878 Location: 894005..917517 Organism: Escherichia coli strain NMBU_W05E18 Replicon: chromosome
Accession: NZ_CP042878 Location: 894005..917517 Organism: Escherichia coli strain NMBU_W05E18 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FVA71_RS04240 () | 889287..889658 | + | 372 | WP_000820092.1 | type II secretion system minor pseudopilin GspI | - |
| FVA71_RS04245 () | 889655..890260 | + | 606 | WP_001564075.1 | type II secretion system minor pseudopilin GspJ | - |
| FVA71_RS04250 () | 890257..891234 | + | 978 | WP_001564074.1 | type II secretion system minor pseudopilin GspK | - |
| FVA71_RS04255 () | 891231..892409 | + | 1179 | WP_000095005.1 | type II secretion system protein GspL | - |
| FVA71_RS04260 () | 892411..892947 | + | 537 | WP_000942771.1 | GspM family type II secretion system protein YghD | - |
| FVA71_RS04265 () | 894005..894781 | + | 777 | WP_001564072.1 | Polysialic acid transport protein KpsM | VF |
| FVA71_RS04270 () | 894778..895440 | + | 663 | WP_000590254.1 | Polysialic acid transport ATP-binding protein KpsT | VF |
| FVA71_RS04275 () | 895483..898956 | + | 3474 | WP_001564071.1 | HAD-IA family hydrolase | - |
| FVA71_RS04280 () | 898976..900346 | + | 1371 | WP_089564247.1 | hypothetical protein | - |
| FVA71_RS04285 () | 900343..901059 | + | 717 | WP_000600935.1 | glycosyltransferase family 2 protein | - |
| FVA71_RS04290 () | 901062..901430 | + | 369 | WP_001564070.1 | capsule biosynthesis phosphatase | - |
| FVA71_RS04295 () | 901427..903004 | + | 1578 | WP_001564069.1 | nucleotidyltransferase family protein | - |
| FVA71_RS04300 () | 903673..904860 | - | 1188 | WP_001161839.1 | hypothetical protein | VF |
| FVA71_RS04305 () | 904895..906922 | - | 2028 | WP_021572937.1 | hypothetical protein | VF |
| FVA71_RS04310 () | 906919..907659 | - | 741 | WP_000030749.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | VF |
| FVA71_RS04315 () | 907669..909345 | - | 1677 | WP_001323195.1 | Polysialic acid transport protein KpsD | VF |
| FVA71_RS04320 () | 909369..910517 | - | 1149 | WP_000905920.1 | hypothetical protein | VF |
| FVA71_RS04325 () | 910589..911572 | - | 984 | WP_126778362.1 | Arabinose 5-phosphate isomerase KpsF | VF |
| FVA71_RS04330 () | 912383..912538 | - | 156 | WP_000729638.1 | IS110 family transposase ISEc32 | Transposase |
| FVA71_RS04335 () | 912970..913903 | - | 934 | Protein_851 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| FVA71_RS04340 () | 913896..914291 | - | 396 | WP_000208382.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | - |
| FVA71_RS04345 () | 914360..915205 | - | 846 | WP_001530851.1 | DUF4942 domain-containing protein | - |
| FVA71_RS04350 () | 915290..915487 | - | 198 | WP_000839250.1 | DUF957 domain-containing protein | - |
| FVA71_RS04355 () | 915504..915992 | - | 489 | WP_000761698.1 | hypothetical protein | - |
| FVA71_RS04360 () | 915989..916366 | - | 378 | WP_000854689.1 | TA system toxin CbtA family protein | Toxin Detail |
| FVA71_RS04365 () | 916443..916823 | - | 381 | WP_001285599.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| FVA71_RS04370 () | 916873..917517 | - | 645 | WP_000086757.1 | hypothetical protein | - |
| FVA71_RS04375 () | 917536..917757 | - | 222 | WP_000692315.1 | DUF987 domain-containing protein | - |
| FVA71_RS04380 () | 917822..918298 | - | 477 | WP_001186727.1 | RadC family protein | - |
| FVA71_RS04385 () | 918314..918787 | - | 474 | WP_001538139.1 | antirestriction protein | - |
| FVA71_RS04390 () | 919051..919872 | - | 822 | WP_173009496.1 | DUF945 domain-containing protein | - |
| FVA71_RS04395 () | 919973..920182 | - | 210 | Protein_863 | DUF905 family protein | - |
| FVA71_RS04400 () | 920283..920738 | - | 456 | WP_000581502.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|