MGE detailed information
MGE type: Prophage MGE length: 47292 bp
Accession: NZ_CP042878 Location: 2548825..2596116 Organism: Escherichia coli strain NMBU_W05E18 Replicon: chromosome
Accession: NZ_CP042878 Location: 2548825..2596116 Organism: Escherichia coli strain NMBU_W05E18 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FVA71_RS12275 () | 2544875..2545858 | + | 984 | WP_000387388.1 | zinc transporter ZntB | - |
| FVA71_RS12280 () | 2546336..2547709 | + | 1374 | WP_001551034.1 | ATP-dependent RNA helicase DbpA | - |
| FVA71_RS12285 () | 2547838..2548773 | - | 936 | WP_000662472.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| FVA71_RS12290 () | 2548825..2550060 | - | 1236 | WP_001551035.1 | Putative defective protein IntQ ; Integrase | Integrase |
| FVA71_RS12295 () | 2550062..2550277 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| FVA71_RS12300 () | 2550377..2550565 | - | 189 | WP_001551036.1 | DUF1187 family protein | - |
| - () | 2550381..2550559 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2550381..2550559 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2550381..2550559 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2550381..2550559 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| FVA71_RS12305 () | 2550558..2550752 | - | 195 | WP_001317028.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| FVA71_RS12310 () | 2550809..2551618 | - | 810 | WP_001551037.1 | recombination protein RecT | - |
| FVA71_RS12315 () | 2551611..2554262 | - | 2652 | WP_001551038.1 | exodeoxyribonuclease VIII | - |
| FVA71_RS12320 () | 2554364..2554639 | - | 276 | WP_001314664.1 | hypothetical protein | - |
| FVA71_RS12325 () | 2554714..2554884 | - | 171 | WP_001551041.1 | phage protein | - |
| FVA71_RS12330 () | 2554884..2555105 | - | 222 | WP_000560221.1 | killing protein KilR | - |
| FVA71_RS12335 () | 2555526..2555678 | - | 153 | WP_001551042.1 | DUF1391 family protein | - |
| FVA71_RS12340 () | 2556132..2556608 | - | 477 | WP_001551043.1 | DNA-binding transcriptional repressor RacR | - |
| FVA71_RS12345 () | 2556732..2557028 | + | 297 | WP_001551044.1 | toxin YdaS | - |
| FVA71_RS12350 () | 2557051..2557473 | + | 423 | WP_001551045.1 | phage protein | - |
| FVA71_RS12355 () | 2557486..2558343 | + | 858 | WP_001551046.1 | DUF1376 domain-containing protein | - |
| FVA71_RS12360 () | 2558350..2559096 | + | 747 | WP_001551047.1 | ATP-binding protein | - |
| FVA71_RS12365 () | 2559119..2559880 | + | 762 | WP_001551048.1 | DUF1627 domain-containing protein | - |
| FVA71_RS12370 () | 2559896..2560327 | + | 432 | WP_001403739.1 | DUF977 family protein | - |
| FVA71_RS12375 () | 2560521..2561675 | + | 1155 | WP_000385105.1 | ATP-binding protein | - |
| FVA71_RS12380 () | 2561650..2563914 | + | 2265 | WP_001551050.1 | S8 family peptidase | - |
| FVA71_RS12385 () | 2564328..2564927 | + | 600 | WP_000940316.1 | DUF1367 family protein | - |
| FVA71_RS12390 () | 2564927..2565217 | + | 291 | WP_001551052.1 | DUF1364 domain-containing protein | - |
| FVA71_RS12395 () | 2565214..2565756 | + | 543 | WP_000640136.1 | DUF1133 family protein | - |
| FVA71_RS12410 () | 2567038..2567253 | + | 216 | WP_000839599.1 | phage lysis protein EssD | - |
| FVA71_RS12415 () | 2567253..2567750 | + | 498 | WP_001135296.1 | lysozyme RrrD | - |
| FVA71_RS12420 () | 2567967..2568152 | + | 186 | WP_001228688.1 | prophage lysis lipoprotein RzoD | - |
| FVA71_RS12425 () | 2568349..2569807 | + | 1459 | Protein_2426 | Trk system potassium uptake protein TrkG | - |
| FVA71_RS12430 () | 2569945..2570736 | + | 792 | WP_001291094.1 | ParB/Srx family N-terminal domain-containing protein | - |
| FVA71_RS12435 () | 2570729..2571661 | + | 933 | WP_001204037.1 | hypothetical protein | - |
| FVA71_RS12440 () | 2571597..2571848 | + | 252 | WP_000613571.1 | hypothetical protein | - |
| FVA71_RS12445 () | 2571852..2572946 | + | 1095 | WP_001551055.1 | terminase small subunit | - |
| FVA71_RS12450 () | 2572927..2574228 | + | 1302 | WP_000625348.1 | terminase family protein | - |
| FVA71_RS12455 () | 2574231..2575637 | + | 1407 | WP_001551056.1 | DUF4055 domain-containing protein | - |
| FVA71_RS12460 () | 2575621..2576733 | + | 1113 | WP_001363932.1 | hypothetical protein | - |
| FVA71_RS12465 () | 2576838..2577602 | + | 765 | WP_001551057.1 | hypothetical protein | - |
| FVA71_RS12470 () | 2577701..2578840 | + | 1140 | WP_000918487.1 | hypothetical protein | - |
| FVA71_RS12475 () | 2578883..2579059 | + | 177 | WP_000908084.1 | hypothetical protein | - |
| FVA71_RS12480 () | 2579063..2579458 | + | 396 | WP_000634214.1 | hypothetical protein | - |
| FVA71_RS12485 () | 2579458..2579841 | + | 384 | WP_001551058.1 | hypothetical protein | - |
| FVA71_RS12490 () | 2579842..2580222 | + | 381 | WP_001551059.1 | hypothetical protein | - |
| FVA71_RS12495 () | 2580219..2580611 | + | 393 | WP_000673077.1 | hypothetical protein | - |
| FVA71_RS12500 () | 2580638..2581600 | + | 963 | WP_001551060.1 | hypothetical protein | - |
| FVA71_RS12505 () | 2581751..2582110 | + | 360 | WP_122452218.1 | hypothetical protein | - |
| FVA71_RS12510 () | 2582218..2582418 | + | 201 | WP_032284309.1 | hypothetical protein | - |
| FVA71_RS12515 () | 2582582..2585080 | + | 2499 | WP_001551061.1 | phage tail length tape measure family protein | - |
| FVA71_RS12520 () | 2585084..2585815 | + | 732 | WP_077634177.1 | phage tail tape measure protein | - |
| FVA71_RS12525 () | 2585808..2586146 | + | 339 | WP_000024051.1 | phage tail protein | - |
| FVA71_RS12530 () | 2586146..2586844 | + | 699 | WP_001152425.1 | phage minor tail protein L | - |
| FVA71_RS12535 () | 2586850..2587593 | + | 744 | WP_032147653.1 | C40 family peptidase | - |
| FVA71_RS12540 () | 2587530..2588138 | + | 609 | WP_050436738.1 | tail assembly protein | - |
| FVA71_RS12545 () | 2588199..2591678 | + | 3480 | WP_001551065.1 | host specificity protein J | - |
| FVA71_RS12550 () | 2591746..2592345 | + | 600 | WP_173009511.1 | Outer membrane protein X | VF |
| FVA71_RS12555 () | 2592410..2594785 | + | 2376 | WP_065726093.1 | prophage tail fiber N-terminal domain-containing protein | - |
| FVA71_RS12560 () | 2594785..2595066 | + | 282 | WP_000654143.1 | hypothetical protein | - |
| FVA71_RS12565 () | 2595076..2596116 | + | 1041 | WP_001551067.1 | tail fiber domain-containing protein | - |
| FVA71_RS12570 () | 2596159..2596452 | + | 294 | WP_000355602.1 | hypothetical protein | - |
| FVA71_RS12575 () | 2596472..2596591 | + | 120 | Protein_2456 | tail fiber assembly protein | - |
| FVA71_RS12580 () | 2596804..2597661 | - | 858 | WP_000968130.1 | iron/manganese ABC transporter permease subunit SitD | - |
| FVA71_RS12585 () | 2597658..2598515 | - | 858 | WP_001101728.1 | iron/manganese ABC transporter permease subunit SitC | - |
| FVA71_RS12590 () | 2598512..2599339 | - | 828 | WP_000983720.1 | iron/manganese ABC transporter ATP-binding protein SitB | - |
| FVA71_RS12595 () | 2599339..2600253 | - | 915 | WP_000286867.1 | iron/manganese ABC transporter substrate-binding protein SitA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|