MGE detailed information
MGE type: Prophage MGE length: 139258 bp
Accession: NZ_CP042517 Location: 1230007..1369264 Organism: Citrobacter freundii strain E33 Replicon: chromosome
Accession: NZ_CP042517 Location: 1230007..1369264 Organism: Citrobacter freundii strain E33 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FR815_RS05810 () | 1225499..1226065 | + | 567 | WP_003034677.1 | VOC family protein | - |
| FR815_RS05815 () | 1226068..1226814 | + | 747 | WP_032936856.1 | copper homeostasis protein CutC | - |
| FR815_RS05820 () | 1227058..1228026 | - | 969 | WP_003839177.1 | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | - |
| FR815_RS05825 () | 1228023..1228766 | - | 744 | WP_003034686.1 | carboxy-S-adenosyl-L-methionine synthase CmoA | - |
| FR815_RS05830 () | 1228807..1229202 | - | 396 | WP_003034689.1 | MAPEG family protein | - |
| FR815_RS05835 () | 1229255..1230028 | - | 774 | WP_164880726.1 | DUF72 domain-containing protein | - |
| FR815_RS05840 () | 1230007..1231320 | - | 1314 | WP_151532582.1 | Fructose import ATP-binding protein FrcA ; Integrase | Integrase |
| FR815_RS05845 () | 1231376..1231612 | - | 237 | WP_047500088.1 | excisionase family protein | - |
| FR815_RS26955 () | 1231622..1231768 | - | 147 | WP_096878749.1 | hypothetical protein | - |
| FR815_RS05850 () | 1231891..1232217 | - | 327 | Protein_1118 | ATPase | - |
| FR815_RS05855 () | 1232214..1232426 | - | 213 | WP_151532584.1 | hypothetical protein | - |
| FR815_RS05860 () | 1232423..1232647 | - | 225 | WP_032652477.1 | hypothetical protein | - |
| FR815_RS05865 () | 1232766..1233344 | - | 579 | WP_151532585.1 | hypothetical protein | - |
| FR815_RS05870 () | 1233355..1233933 | - | 579 | WP_151532586.1 | hypothetical protein | - |
| FR815_RS05875 () | 1233930..1234337 | - | 408 | WP_151532587.1 | hypothetical protein | - |
| FR815_RS05885 () | 1234759..1235115 | - | 357 | WP_088902161.1 | hypothetical protein | - |
| FR815_RS05890 () | 1235215..1235505 | - | 291 | WP_088902162.1 | hypothetical protein | - |
| FR815_RS05895 () | 1235567..1235812 | - | 246 | WP_050484865.1 | hypothetical protein | - |
| FR815_RS05900 () | 1236141..1236803 | - | 663 | WP_167470000.1 | helix-turn-helix domain-containing protein | - |
| FR815_RS05905 () | 1236962..1237222 | + | 261 | WP_088902164.1 | helix-turn-helix domain-containing protein | - |
| FR815_RS05910 () | 1237253..1238081 | + | 829 | Protein_1129 | transporter | - |
| FR815_RS05915 () | 1238624..1238974 | + | 351 | Protein_1130 | helix-turn-helix domain-containing protein | - |
| FR815_RS05920 () | 1238989..1239870 | + | 882 | WP_151532589.1 | ATP-binding protein | - |
| FR815_RS05925 () | 1239867..1241225 | + | 1359 | WP_151532590.1 | replicative DNA helicase | - |
| FR815_RS05930 () | 1241236..1241547 | + | 312 | WP_151532591.1 | hypothetical protein | - |
| FR815_RS05935 () | 1241629..1241976 | + | 348 | WP_151532592.1 | antitermination protein | - |
| FR815_RS05940 () | 1241989..1242375 | - | 387 | WP_151532593.1 | hypothetical protein | - |
| FR815_RS05950 () | 1242625..1243503 | - | 879 | WP_151641788.1 | hypothetical protein | - |
| FR815_RS05970 () | 1244321..1244716 | + | 396 | WP_008323296.1 | phage holin family protein | - |
| FR815_RS05975 () | 1244703..1244984 | + | 282 | WP_008323297.1 | phage holin family protein | - |
| FR815_RS05980 () | 1244984..1245601 | + | 618 | WP_151532595.1 | glycoside hydrolase family 19 protein | - |
| FR815_RS05985 () | 1245598..1246137 | + | 540 | WP_151532596.1 | DUF2514 domain-containing protein | - |
| FR815_RS05990 () | 1246262..1246990 | + | 729 | WP_151532597.1 | Fur-regulated protein | - |
| FR815_RS05995 () | 1247005..1247238 | + | 234 | WP_151532598.1 | hypothetical protein | - |
| FR815_RS06000 () | 1247226..1247576 | + | 351 | WP_151532599.1 | HNH endonuclease | - |
| FR815_RS06005 () | 1247733..1248206 | + | 474 | WP_151532600.1 | phage terminase small subunit P27 family | - |
| FR815_RS06010 () | 1248206..1249963 | + | 1758 | WP_151532601.1 | terminase large subunit | - |
| FR815_RS26960 () | 1249972..1250121 | + | 150 | WP_162138603.1 | hypothetical protein | - |
| FR815_RS06015 () | 1250111..1251337 | + | 1227 | WP_038642109.1 | phage portal protein | - |
| FR815_RS06020 () | 1251330..1251929 | + | 600 | WP_085048946.1 | HK97 family phage prohead protease | - |
| FR815_RS06025 () | 1251939..1253156 | + | 1218 | WP_151532602.1 | phage major capsid protein | - |
| FR815_RS06030 () | 1253234..1253554 | + | 321 | WP_038642103.1 | head-tail connector protein | - |
| FR815_RS06035 () | 1253564..1253902 | + | 339 | WP_038642100.1 | phage head closure protein | - |
| FR815_RS06040 () | 1253899..1254348 | + | 450 | WP_149692066.1 | HK97 gp10 family phage protein | - |
| FR815_RS06045 () | 1254345..1254692 | + | 348 | WP_065944737.1 | DUF3168 domain-containing protein | - |
| FR815_RS06050 () | 1254750..1255454 | + | 705 | WP_151532603.1 | phage tail protein | - |
| FR815_RS06055 () | 1255482..1255871 | + | 390 | WP_151532604.1 | phage tail assembly chaperone | - |
| FR815_RS06060 () | 1255880..1256158 | + | 279 | WP_016150477.1 | DUF4035 domain-containing protein | - |
| FR815_RS06065 () | 1256210..1256503 | + | 294 | WP_001549116.1 | hypothetical protein | - |
| FR815_RS06070 () | 1256562..1260059 | + | 3498 | WP_151532606.1 | phage tail tape measure protein | - |
| FR815_RS06075 () | 1260101..1260460 | + | 360 | WP_016150474.1 | hypothetical protein | - |
| FR815_RS06080 () | 1260449..1260673 | - | 225 | WP_003841703.1 | hypothetical protein | - |
| FR815_RS06085 () | 1260839..1261432 | + | 594 | WP_151532607.1 | hypothetical protein | - |
| FR815_RS06090 () | 1261432..1262016 | + | 585 | WP_151532608.1 | hypothetical protein | - |
| FR815_RS06095 () | 1262023..1262421 | + | 399 | WP_151532609.1 | hypothetical protein | - |
| FR815_RS06100 () | 1262421..1265132 | + | 2712 | WP_151532610.1 | DUF1983 domain-containing protein | - |
| FR815_RS06105 () | 1265132..1266076 | + | 945 | WP_151532611.1 | hypothetical protein | - |
| FR815_RS06110 () | 1266086..1267411 | + | 1326 | WP_151532612.1 | phage tail protein | - |
| FR815_RS06115 () | 1267547..1267789 | - | 243 | WP_151532613.1 | DinI family protein | - |
| FR815_RS06120 () | 1267883..1267963 | - | 81 | Protein_1168 | DinI family protein | - |
| FR815_RS06125 () | 1268110..1268499 | + | 390 | WP_151532614.1 | LexA family transcriptional regulator | - |
| FR815_RS06130 () | 1268500..1269168 | - | 669 | WP_151532615.1 | SOS response-associated peptidase | - |
| FR815_RS06140 () | 1269491..1270057 | - | 567 | WP_003841685.1 | hydrolase | - |
| FR815_RS06150 () | 1270324..1272096 | + | 1773 | WP_003034862.1 | aspartate--tRNA ligase | - |
| FR815_RS06155 () | 1272098..1272541 | + | 444 | WP_003844155.1 | dihydroneopterin triphosphate diphosphatase | - |
| FR815_RS06160 () | 1272570..1273313 | + | 744 | WP_003034865.1 | transcriptional regulatory protein YebC | VF |
| FR815_RS06165 () | 1273348..1273869 | + | 522 | WP_003034867.1 | crossover junction endodeoxyribonuclease RuvC | - |
| FR815_RS06170 () | 1273950..1274561 | + | 612 | WP_003034869.1 | Holliday junction branch migration protein RuvA | - |
| FR815_RS06175 () | 1274570..1275580 | + | 1011 | WP_003034872.1 | Holliday junction branch migration DNA helicase RuvB | - |
| FR815_RS06180 () | 1275659..1276444 | - | 786 | WP_003034874.1 | hypothetical protein | VF |
| FR815_RS06185 () | 1276441..1277196 | - | 756 | WP_046671223.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| FR815_RS06190 () | 1277275..1278219 | + | 945 | WP_003844151.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| FR815_RS06195 () | 1278235..1279554 | + | 1320 | WP_003034883.1 | murein DD-endopeptidase MepM | - |
| FR815_RS06200 () | 1279674..1280645 | + | 972 | WP_003841672.1 | Lipid A biosynthesis myristoyltransferase | VF |
| FR815_RS06205 () | 1280689..1282131 | - | 1443 | WP_003034890.1 | pyruvate kinase | - |
| FR815_RS06210 () | 1282250..1283119 | - | 870 | WP_003034893.1 | MurR/RpiR family transcriptional regulator | - |
| FR815_RS06215 () | 1283487..1284962 | + | 1476 | WP_003034896.1 | glucose-6-phosphate dehydrogenase | - |
| FR815_RS06220 () | 1285196..1287007 | + | 1812 | WP_119174331.1 | phosphogluconate dehydratase | - |
| FR815_RS06225 () | 1287042..1287683 | + | 642 | WP_003034901.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| FR815_RS06230 () | 1287751..1288929 | - | 1179 | WP_071684720.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| FR815_RS06235 () | 1289061..1289351 | + | 291 | WP_003034906.1 | DNA damage-inducible protein YebG | - |
| FR815_RS06240 () | 1289473..1289826 | + | 354 | WP_003034909.1 | protein YebF | - |
| FR815_RS06245 () | 1289921..1290580 | + | 660 | WP_049016040.1 | tellurite resistance TerB family protein | - |
| FR815_RS06250 () | 1290667..1292721 | + | 2055 | WP_192797745.1 | oligopeptidase B | - |
| FR815_RS06255 () | 1292712..1293374 | - | 663 | WP_003833802.1 | exodeoxyribonuclease X | - |
| FR815_RS06260 () | 1293398..1294054 | - | 657 | WP_003841657.1 | carbon-nitrogen hydrolase family protein | - |
| FR815_RS06265 () | 1294161..1294391 | - | 231 | WP_003034925.1 | DNA polymerase III subunit theta | - |
| FR815_RS06270 () | 1294540..1296291 | + | 1752 | WP_151532617.1 | hypothetical protein ; Integrase | Integrase |
| FR815_RS06275 () | 1296712..1297431 | + | 720 | WP_151532618.1 | inovirus-type Gp2 protein | - |
| FR815_RS06280 () | 1297746..1298324 | - | 579 | WP_016151033.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| FR815_RS06285 () | 1298569..1300320 | - | 1752 | WP_151532619.1 | hypothetical protein | - |
| FR815_RS06290 () | 1300881..1301267 | + | 387 | WP_151532620.1 | hypothetical protein | - |
| FR815_RS06295 () | 1301430..1301783 | - | 354 | WP_137397182.1 | hypothetical protein | - |
| FR815_RS06300 () | 1302077..1302322 | - | 246 | WP_115454751.1 | hypothetical protein | - |
| FR815_RS06310 () | 1302979..1303353 | + | 375 | WP_003034928.1 | CopC domain-containing protein YobA | - |
| FR815_RS06315 () | 1303357..1304229 | + | 873 | WP_032935389.1 | copper homeostasis membrane protein CopD | - |
| FR815_RS06320 () | 1304250..1304588 | + | 339 | WP_003034934.1 | YebY family protein | - |
| - () | 1304709..1304851 | - | 143 | - | - | Antitoxin Detail |
| - () | 1304744..1304847 | + | 104 | - | - | Toxin Detail |
| FR815_RS06325 () | 1304925..1306010 | - | 1086 | WP_001129310.1 | hypothetical protein ; Integrase | Integrase |
| FR815_RS06330 () | 1305979..1306251 | - | 273 | WP_151532621.1 | excisionase | - |
| FR815_RS06335 () | 1306315..1306557 | - | 243 | WP_001237028.1 | DUF4060 family protein | - |
| FR815_RS06340 () | 1306544..1307251 | - | 708 | WP_151532622.1 | hypothetical protein | - |
| FR815_RS06345 () | 1307244..1307588 | - | 345 | WP_151532623.1 | hypothetical protein | - |
| FR815_RS06350 () | 1307623..1308708 | - | 1086 | WP_151532624.1 | recombinase RecT | - |
| FR815_RS06355 () | 1308720..1311572 | - | 2853 | WP_151532625.1 | PD-(D/E)XK nuclease-like domain-containing protein | - |
| FR815_RS26965 () | 1311712..1311876 | - | 165 | WP_192797749.1 | hypothetical protein | - |
| FR815_RS06360 () | 1311881..1312078 | - | 198 | WP_151532626.1 | DUF1482 family protein | - |
| FR815_RS06365 () | 1312078..1312278 | - | 201 | WP_097728169.1 | hypothetical protein | - |
| FR815_RS26970 () | 1312275..1312433 | - | 159 | WP_153690470.1 | hypothetical protein | - |
| FR815_RS06375 () | 1312721..1312927 | + | 207 | WP_170975197.1 | hypothetical protein | - |
| FR815_RS06380 () | 1312959..1313339 | - | 381 | WP_151532627.1 | hypothetical protein | - |
| FR815_RS06385 () | 1313423..1313695 | - | 273 | WP_151532686.1 | hypothetical protein | - |
| FR815_RS06390 () | 1313817..1314227 | - | 411 | WP_151532628.1 | hypothetical protein | - |
| FR815_RS06395 () | 1314358..1315080 | - | 723 | WP_151532687.1 | helix-turn-helix transcriptional regulator | - |
| FR815_RS06400 () | 1315149..1315376 | + | 228 | WP_016156713.1 | hypothetical protein | - |
| FR815_RS06405 () | 1315407..1315946 | + | 540 | WP_151532629.1 | toxin YdaT domain-containing protein | - |
| FR815_RS06410 () | 1316076..1317077 | + | 1002 | WP_151532630.1 | replication protein | - |
| FR815_RS06415 () | 1317074..1317769 | + | 696 | WP_151532631.1 | phage replication protein | - |
| FR815_RS06420 () | 1317784..1318095 | + | 312 | WP_151532632.1 | hypothetical protein | - |
| FR815_RS06425 () | 1318092..1318346 | + | 255 | Protein_1227 | hypothetical protein | - |
| FR815_RS06430 () | 1318706..1318918 | + | 213 | WP_054528489.1 | hypothetical protein | - |
| FR815_RS06435 () | 1318915..1319238 | + | 324 | WP_054528488.1 | hypothetical protein | - |
| FR815_RS06440 () | 1319242..1319517 | + | 276 | WP_054528487.1 | hypothetical protein | - |
| FR815_RS06445 () | 1319514..1320170 | + | 657 | WP_151532633.1 | hypothetical protein | - |
| FR815_RS06450 () | 1320605..1321204 | + | 600 | WP_019076919.1 | DUF1367 family protein | - |
| FR815_RS06455 () | 1321204..1321410 | + | 207 | WP_071684428.1 | hypothetical protein | - |
| FR815_RS06460 () | 1321413..1322000 | + | 588 | WP_119174318.1 | recombination protein NinG | - |
| FR815_RS06465 () | 1321997..1322134 | + | 138 | WP_000142505.1 | YlcG family protein | - |
| FR815_RS06470 () | 1322131..1322820 | + | 690 | WP_119174317.1 | antiterminator | - |
| FR815_RS06475 () | 1323459..1323899 | + | 441 | WP_119174316.1 | hypothetical protein | - |
| FR815_RS06480 () | 1324108..1324296 | + | 189 | WP_119174315.1 | hypothetical protein | - |
| FR815_RS06485 () | 1324451..1324729 | + | 279 | WP_001568784.1 | holin | - |
| FR815_RS06490 () | 1324701..1325249 | + | 549 | WP_151532634.1 | lysozyme | - |
| FR815_RS06495 () | 1325246..1325782 | + | 537 | WP_151532635.1 | DUF2514 domain-containing protein | - |
| FR815_RS06500 () | 1325783..1325995 | - | 213 | WP_071684699.1 | KTSC domain-containing protein | - |
| FR815_RS06505 () | 1326571..1327209 | + | 639 | WP_151532636.1 | hypothetical protein | - |
| FR815_RS06510 () | 1327241..1327696 | + | 456 | WP_023300389.1 | DUF2280 domain-containing protein | - |
| FR815_RS06515 () | 1327693..1328946 | + | 1254 | WP_125363636.1 | phage terminase large subunit | - |
| FR815_RS06520 () | 1329079..1330431 | + | 1353 | WP_125363635.1 | DUF1073 domain-containing protein | - |
| FR815_RS06525 () | 1330385..1331314 | + | 930 | WP_125363634.1 | phage head morphogenesis protein | - |
| FR815_RS06530 () | 1331318..1332583 | + | 1266 | WP_151532637.1 | hypothetical protein | - |
| FR815_RS06535 () | 1332596..1333051 | + | 456 | WP_063933408.1 | hypothetical protein | - |
| FR815_RS06540 () | 1333066..1334163 | + | 1098 | WP_151532638.1 | hypothetical protein | - |
| FR815_RS06545 () | 1334173..1334469 | + | 297 | WP_151532639.1 | hypothetical protein | - |
| FR815_RS06555 () | 1335104..1335340 | + | 237 | WP_151532640.1 | hypothetical protein | - |
| FR815_RS06560 () | 1335344..1335706 | + | 363 | WP_125363628.1 | hypothetical protein | - |
| FR815_RS06570 () | 1335794..1336231 | + | 438 | WP_151532641.1 | hypothetical protein | - |
| FR815_RS06575 () | 1336228..1336614 | + | 387 | WP_151532642.1 | hypothetical protein | - |
| FR815_RS06580 () | 1336632..1337369 | + | 738 | WP_151532643.1 | immunoglobulin domain-containing protein | - |
| FR815_RS06585 () | 1337409..1338062 | + | 654 | WP_151532644.1 | hypothetical protein | - |
| FR815_RS06590 () | 1338246..1338776 | + | 531 | WP_151532645.1 | KilA-N domain-containing protein | - |
| FR815_RS06595 () | 1338890..1339264 | + | 375 | WP_042889549.1 | hypothetical protein | - |
| FR815_RS06600 () | 1339257..1339559 | + | 303 | WP_045332252.1 | hypothetical protein | - |
| FR815_RS06605 () | 1339630..1340271 | + | 642 | WP_151532646.1 | hypothetical protein | - |
| FR815_RS06610 () | 1340331..1343654 | + | 3324 | WP_151532688.1 | tape measure protein | - |
| FR815_RS06615 () | 1343657..1344004 | + | 348 | WP_042889552.1 | phage tail protein | - |
| FR815_RS06620 () | 1344014..1344304 | + | 291 | WP_125363623.1 | hypothetical protein | - |
| FR815_RS06625 () | 1344258..1344494 | - | 237 | WP_151532647.1 | hypothetical protein | - |
| FR815_RS06630 () | 1344662..1345366 | + | 705 | WP_125363622.1 | phage minor tail protein L | - |
| FR815_RS06635 () | 1345366..1346085 | + | 720 | WP_151532648.1 | C40 family peptidase | - |
| FR815_RS06640 () | 1346028..1346555 | + | 528 | WP_071697834.1 | tail assembly protein | - |
| FR815_RS06645 () | 1346565..1349741 | + | 3177 | WP_151532649.1 | phage tail protein | - |
| FR815_RS06650 () | 1349741..1350685 | + | 945 | WP_151532650.1 | hypothetical protein | - |
| FR815_RS06655 () | 1350695..1352020 | + | 1326 | WP_151532651.1 | phage tail protein | - |
| FR815_RS06660 () | 1352156..1352398 | - | 243 | WP_000497432.1 | DinI family protein | - |
| FR815_RS06665 () | 1352476..1352895 | + | 420 | WP_008784491.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| FR815_RS06670 () | 1352897..1354165 | + | 1269 | WP_054528461.1 | Y-family DNA polymerase | - |
| FR815_RS06675 () | 1354158..1354829 | - | 672 | WP_151532652.1 | SOS response-associated peptidase | - |
| FR815_RS06680 () | 1355314..1355955 | + | 642 | WP_128295755.1 | protein-serine/threonine phosphatase | - |
| FR815_RS06685 () | 1355956..1356147 | - | 192 | WP_003034941.1 | YebW family protein | - |
| FR815_RS06690 () | 1356250..1356486 | - | 237 | WP_029139506.1 | DUF1480 family protein | - |
| FR815_RS06695 () | 1356587..1358008 | - | 1422 | WP_075204992.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| FR815_RS06700 () | 1358088..1360721 | - | 2634 | WP_119174285.1 | hypothetical protein | VF |
| FR815_RS06705 () | 1360690..1361973 | - | 1284 | WP_003841983.1 | membrane integrity lipid transport subunit YebS | - |
| FR815_RS06710 () | 1362102..1362599 | + | 498 | WP_003034953.1 | GAF domain-containing protein | - |
| FR815_RS06715 () | 1362696..1363382 | + | 687 | WP_003034957.1 | RNA chaperone ProQ | - |
| FR815_RS06720 () | 1363402..1365450 | + | 2049 | WP_151532653.1 | carboxy terminal-processing peptidase | - |
| FR815_RS06725 () | 1365643..1366524 | + | 882 | WP_003034964.1 | protease HtpX | - |
| FR815_RS06730 () | 1366571..1367944 | - | 1374 | WP_003841986.1 | MFS transporter | - |
| FR815_RS06735 () | 1368119..1368910 | + | 792 | WP_003833778.1 | DNA-binding transcriptional regulator KdgR | - |
| FR815_RS06740 () | 1369025..1369264 | - | 240 | WP_003841988.1 | hypothetical protein | - |
| FR815_RS06745 () | 1369429..1369572 | + | 144 | WP_003034977.1 | PhoP/PhoQ regulator MgrB | - |
| FR815_RS06750 () | 1369647..1369931 | + | 285 | WP_003841991.1 | YebO family protein | - |
| FR815_RS06755 () | 1370568..1370711 | + | 144 | WP_003034983.1 | YobF family protein | - |
| FR815_RS06760 () | 1370724..1370933 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| FR815_RS06765 () | 1371153..1372898 | + | 1746 | WP_003841630.1 | peptidoglycan glycosyltransferase FtsI | - |
| FR815_RS06770 () | 1372962..1373771 | + | 810 | WP_003841628.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|