NZ_CP0424801..176400

MGE detailed information

MGE type: Conjugative plasmid        MGE length: 176400 bp
Accession: NZ_CP042480        Location: 1..176400         Organism: Citrobacter freundii strain C50       Replicon: plasmid pC50_002


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
FR753_RS26305 () 1965..2942 + 978 WP_151532703.1 hypothetical protein -
FR753_RS26310 () 3016..3324 - 309 WP_151532704.1 cytoplasmic protein -
FR753_RS26315 () 3513..5033 - 1521 WP_151532705.1 hypothetical protein -
FR753_RS26320 () 5071..5628 - 558 WP_151532706.1 Tn3 family transposase TnpR_Tn3 Transposase
FR753_RS26325 () 5792..8800 + 3009 WP_012817690.1 Tn3 family transposase ISEc63 Transposase
FR753_RS26335 () 9405..9734 + 330 WP_000493286.1 type II toxin-antitoxin system RelE/ParE family toxin -
FR753_RS26340 () 9715..9996 + 282 WP_000780222.1 helix-turn-helix transcriptional regulator -
FR753_RS26345 () 10274..11254 + 981 WP_016947617.1 IS5 family transposase ISKpn26 Transposase
FR753_RS26350 () 11577..12185 - 609 WP_022652299.1 TetR/AcrR family transcriptional regulator -
FR753_RS26355 () 12562..14373 + 1812 WP_151532707.1 beta-glucuronidase -
FR753_RS26360 () 14370..15743 + 1374 WP_022652297.1 glucuronide transporter -
FR753_RS26365 () 15792..17057 + 1266 WP_022652296.1 glucuronide uptake porin UidC -
FR753_RS26370 () 17359..18543 + 1185 WP_022652295.1 mannonate dehydratase -
FR753_RS26375 () 18650..20119 + 1470 WP_022652294.1 fructuronate reductase -
FR753_RS26380 () 20139..21569 + 1431 WP_022652293.1 glucuronate isomerase -
FR753_RS26385 () 21787..22575 + 789 WP_032430963.1 Uxu operon transcriptional regulator -
FR753_RS26390 () 22723..23427 + 705 WP_001067834.1 IS6 family transposase IS26 Transposase
FR753_RS26400 () 23702..24715 - 1014 WP_000845039.1 IS91 family transposase ISAzo26 Transposase
FR753_RS26405 () 24868..25608 + 741 WP_015060105.1 Metallo-beta-lactamase type 2 ARG
FR753_RS26410 () 25840..26172 + 333 WP_015063357.1 quaternary ammonium compound efflux SMR transporter QacG2 -
FR753_RS26415 () 26299..26853 + 555 WP_003159191.1 aminoglycoside N-acetyltransferase AAC(6')-Ib4 -
FR753_RS26420 () 26948..27580 + 633 WP_000186237.1 Chloramphenicol acetyltransferase VF
FR753_RS26425 () 27649..28449 + 801 WP_000846390.1 Beta-lactamase OXA-10 ARG
FR753_RS26430 () 28466..29257 + 792 WP_001206316.1 Streptomycin 3''-adenylyltransferase ARG
FR753_RS26435 () 29265..29579 + 315 Protein_25 ISAs1 family transposase ISKpn9 Transposase
FR753_RS26440 () 29746..30645 + 900 WP_020956917.1 Extended-spectrum beta-lactamase PER-1 ARG
FR753_RS26445 () 30659..31120 + 462 Protein_27 IS6 family transposase IS6100 Transposase
FR753_RS27460 () 31260..31325 - 66 Protein_28 EAL domain-containing protein -
FR753_RS26460 () 31651..32136 - 486 WP_151532708.1 hypothetical protein -
FR753_RS26465 () 32515..35301 - 2787 Protein_30 Tn3 family transposase TnpA_TnAs1 Transposase
FR753_RS26470 () 35331..38363 - 3033 WP_039272567.1 Tn3 family transposase TnpA_ISPsy30 Transposase
FR753_RS26475 () 38360..38953 - 594 WP_039272634.1 Tn3 family transposase TnpR_ISPsy30 Transposase
FR753_RS26485 () 39217..40146 - 930 Protein_33 IS91 family transposase ISAzo26 Transposase
FR753_RS26490 () 40305..40859 + 555 WP_063840321.1 Aminoglycoside N(6')-acetyltransferase type 1 ARG
FR753_RS26495 () 40990..41820 + 831 WP_001334766.1 Beta-lactamase OXA-1 ARG
FR753_RS26500 () 41958..42590 + 633 WP_000186237.1 Chloramphenicol acetyltransferase VF
FR753_RS26505 () 42675..43127 + 453 WP_001749986.1 hypothetical protein ARG
FR753_RS26510 () 43350..43697 + 348 WP_000679427.1 Multidrug transporter EmrE ARG
FR753_RS26515 () 43691..44530 + 840 WP_000259031.1 Dihydropteroate synthase ARG
FR753_RS26525 () 44658..44861 + 204 WP_000376616.1 hypothetical protein -
FR753_RS26530 () 45017..46222 + 1206 WP_000184001.1 chromate efflux transporter -
FR753_RS26535 () 46233..46538 + 306 WP_000130000.1 hypothetical protein Relaxase
FR753_RS27465 () 46582..46647 + 66 Protein_43 EAL domain-containing protein -
FR753_RS26545 () 46765..47529 + 765 WP_001389365.1 IS6 family transposase IS6100 Transposase
FR753_RS26560 () 48022..48606 - 585 WP_001137892.1 TetR family transcriptional regulator -
FR753_RS26565 () 48606..49844 - 1239 WP_000004159.1 MFS transporter -
FR753_RS26570 () 49841..50746 - 906 WP_000219391.1 hypothetical protein ARG
FR753_RS26580 () 50868..51572 - 705 WP_001067855.1 IS6 family transposase IS26 Transposase
FR753_RS26585 () 51805..52665 + 861 WP_000557454.1 SPBc2 prophage-derived aminoglycoside N(3')-acetyltransferase-like protein YokD ARG
FR753_RS26590 () 52678..52980 + 303 Protein_50 tunicamycin resistance protein -
FR753_RS26595 () 53034..53738 - 705 WP_001067855.1 IS6 family transposase IS26 Transposase
FR753_RS26600 () 53803..56346 + 2544 Protein_52 Tn3 family transposase ISEc63 Transposase
FR753_RS26605 () 56635..56991 - 357 WP_000215515.1 cupin domain-containing protein -
FR753_RS26615 () 57394..58098 - 705 WP_001067848.1 IS6 family transposase IS15DI Transposase
FR753_RS26620 () 58184..59206 + 1023 WP_008322227.1 helicase UvrD -
FR753_RS26630 () 59459..59689 + 231 WP_001261276.1 AbrB/MazE/SpoVT family DNA-binding domain-containing protein Antitoxin Detail
FR753_RS26635 () 59686..60102 + 417 WP_008322233.1 type II toxin-antitoxin system VapC family toxin Toxin Detail
FR753_RS26640 () 60296..60465 + 170 Protein_58 DUF596 domain-containing protein -
FR753_RS26645 () 60648..61568 - 921 WP_008322235.1 carbohydrate kinase -
FR753_RS26650 () 61565..62935 - 1371 WP_008322237.1 hypothetical protein -
FR753_RS26655 () 63013..64032 - 1020 WP_004113181.1 ribose ABC transporter permease -
FR753_RS26660 () 64019..65551 - 1533 WP_008322240.1 Ribose import ATP-binding protein RbsA VF
FR753_RS26665 () 65616..66569 - 954 WP_008322243.1 ABC transporter substrate-binding protein -
FR753_RS26670 () 66856..67887 - 1032 WP_008322245.1 LacI family transcriptional regulator -
FR753_RS26675 () 68393..68590 + 198 WP_008322246.1 hypothetical protein -
FR753_RS26680 () 68595..69125 + 531 WP_008322250.1 thermonuclease family protein -
FR753_RS26685 () 69401..70432 + 1032 WP_001395480.1 IS630 family transposase ISEc33 Transposase
FR753_RS26690 () 70454..70882 + 429 Protein_68 hypothetical protein -
FR753_RS26695 () 71016..71228 + 213 WP_022652265.1 hypothetical protein -
FR753_RS26700 () 71254..72222 - 969 WP_013087110.1 IS5 family transposase IS903B Transposase
FR753_RS26710 () 72256..73353 - 1098 Protein_71 hypothetical protein -
FR753_RS26715 () 73350..74730 - 1381 Protein_72 hypothetical protein -
FR753_RS26720 () 74919..75902 + 984 WP_022652268.1 tyrosine-type recombinase/integrase -
FR753_RS26725 () 75996..76451 - 456 WP_001166628.1 IS607 family transposase ISChh1 Transposase
FR753_RS26730 () 76523..76918 + 396 WP_001294653.1 mercuric ion transporter MerT -
FR753_RS26735 () 76934..77209 + 276 WP_000732275.1 mercury resistance system periplasmic binding protein MerP -
FR753_RS26740 () 77237..77662 + 426 WP_000522996.1 organomercurial transporter MerC -
FR753_RS26745 () 77701..79386 + 1686 WP_000209296.1 mercury(II) reductase -
FR753_RS26750 () 79404..79769 + 366 WP_001277466.1 mercury resistance co-regulator MerD -
FR753_RS26755 () 79766..80002 + 237 WP_022652270.1 broad-spectrum mercury transporter MerE -
FR753_RS26765 () 80068..80280 + 213 WP_000993245.1 DUF3330 domain-containing protein -
FR753_RS26770 () 80480..81184 + 705 WP_001067855.1 IS6 family transposase IS26 Transposase
FR753_RS26775 () 81511..82011 + 501 WP_001752509.1 non-heme ferritin-like protein -
FR753_RS26780 () 82130..83358 + 1229 WP_148116659.1 IS3 family transposase ISEc27 Transposase
FR753_RS26785 () 83664..84644 - 981 WP_016947617.1 IS5 family transposase ISKpn26 Transposase
FR753_RS26790 () 84922..85203 - 282 WP_000780222.1 helix-turn-helix transcriptional regulator -
FR753_RS26795 () 85184..85513 - 330 WP_000493286.1 type II toxin-antitoxin system RelE/ParE family toxin -
FR753_RS26800 () 85932..86885 - 954 WP_022652300.1 IS110 family transposase IS4321R Transposase
FR753_RS26805 () 87073..87681 + 609 WP_004393990.1 TetR/AcrR family transcriptional regulator -
FR753_RS26810 () 87678..88829 + 1152 WP_022652304.1 efflux RND transporter periplasmic adaptor subunit -
FR753_RS26815 () 88826..90031 + 1206 WP_022652303.1 ABC transporter permease -
FR753_RS26820 () 90033..90743 + 711 WP_022652302.1 Lipoprotein-releasing system ATP-binding protein LolD VF
FR753_RS27470 () 90772..91299 + 528 WP_022652301.1 hypothetical protein -
FR753_RS26825 () 91364..92317 + 954 WP_022652300.1 IS110 family transposase IS4321R Transposase
FR753_RS26835 () 92908..93417 + 510 WP_050483874.1 sigma-70 family RNA polymerase sigma factor -
FR753_RS26840 () 93574..94575 + 1002 Protein_96 permease -
FR753_RS26845 () 94589..94819 + 231 WP_021314637.1 thioredoxin family protein -
FR753_RS26850 () 95097..95300 - 204 WP_022652307.1 hypothetical protein -
FR753_RS26855 () 95382..96209 - 828 WP_032430841.1 universal stress protein -
FR753_RS26860 () 96227..97705 - 1479 WP_022652309.1 SulP family inorganic anion transporter -
FR753_RS26865 () 98212..99234 + 1023 WP_032430957.1 IS110 family transposase IS1618 Transposase
FR753_RS26870 () 99526..99833 - 308 Protein_102 IS1 family transposase -
FR753_RS26880 () 100310..101050 + 741 WP_022652310.1 site-specific integrase -
FR753_RS26885 () 101376..102365 - 990 WP_022652311.1 RepB family plasmid replication initiator protein -
FR753_RS26890 () 103221..103490 + 270 WP_022652312.1 DUF1778 domain-containing protein Antitoxin Detail
FR753_RS26895 () 103494..104024 + 531 WP_022652313.1 GNAT family N-acetyltransferase Toxin Detail
FR753_RS26900 () 104156..105049 + 894 WP_077873527.1 IS5 family transposase IS5D Transposase
FR753_RS26905 () 105190..105480 - 291 Protein_108 IS3 family transposase ISEhe3 Transposase
FR753_RS26910 () 105582..106319 - 738 WP_072033343.1 IS21 family transposase ISAs29 Transposase
FR753_RS26915 () 106336..107880 - 1545 WP_043016701.1 IS21 family transposase ISAs29 Transposase
FR753_RS26920 () 108120..108728 - 609 Protein_111 IS3 family transposase ISEhe3 Transposase
FR753_RS26925 () 108793..109944 + 1152 WP_022652315.1 IS30 family transposase IS30D Transposase
FR753_RS26930 () 110053..110436 + 384 WP_001201739.1 IS66 family transposase IS682 Transposase
FR753_RS26935 () 110433..110780 + 348 WP_000609174.1 IS66 family transposase ISCfr14 Transposase
FR753_RS26940 () 110830..112365 + 1536 WP_001000409.1 IS66 family transposase ISSgsp1 Transposase
FR753_RS26945 () 112422..113762 - 1341 WP_008786676.1 IS110 family transposase ISWpi13 Transposase
FR753_RS26950 () 113993..114235 - 243 Protein_117 IS3 family transposase ISEhe3 Transposase
FR753_RS26955 () 114606..115772 + 1167 WP_022652317.1 plasmid-partitioning protein SopA -
FR753_RS26960 () 115772..116737 + 966 WP_022652318.1 ParB/RepB/Spo0J family plasmid partition protein -
FR753_RS26965 () 117470..118512 - 1043 Protein_120 translesion error-prone DNA polymerase V subunit UmuC -
FR753_RS26970 () 118766..120904 + 2139 WP_022652236.1 hypothetical protein -
FR753_RS26975 () 121238..122641 + 1404 WP_072200700.1 DNA cytosine methyltransferase -
FR753_RS26980 () 122675..123889 - 1215 WP_022652238.1 type II site-specific deoxyribonuclease -
FR753_RS26985 () 124038..126164 - 2127 WP_022652239.1 tyrosine-type recombinase/integrase -
FR753_RS26990 () 126148..127152 - 1005 Protein_125 tyrosine-type recombinase/integrase -
FR753_RS26995 () 127226..127453 - 228 Protein_126 DNA polymerase V subunit UmuC -
FR753_RS27000 () 127453..127875 - 423 WP_022652242.1 translesion error-prone DNA polymerase V autoproteolytic subunit -
FR753_RS27005 () 128055..128726 - 672 WP_022652243.1 SOS response-associated peptidase family protein -
FR753_RS27010 () 129086..129763 + 678 WP_022652244.1 DNA methylase -
FR753_RS27015 () 129763..129984 + 222 WP_022652245.1 hypothetical protein -
FR753_RS27020 () 129995..130414 + 420 WP_022652246.1 DUF1380 domain-containing protein -
FR753_RS27025 () 130468..131247 + 780 WP_022652247.1 hypothetical protein -
FR753_RS27030 () 131314..131517 - 204 WP_042889371.1 hypothetical protein -
FR753_RS27035 () 131654..132160 + 507 WP_015062672.1 antirestriction protein ArdA -
FR753_RS27040 () 132203..132394 + 192 WP_022652248.1 hypothetical protein -
FR753_RS27045 () 132586..132840 + 255 WP_072200699.1 DNA polymerase III subunit theta -
FR753_RS27050 () 132875..133192 + 318 WP_022652250.1 hypothetical protein -
FR753_RS27475 () 133368..133580 + 213 WP_042934573.1 hypothetical protein -
FR753_RS27060 () 133818..134048 + 231 WP_008324190.1 DUF905 domain-containing protein -
FR753_RS27065 () 134119..136128 + 2010 WP_151532709.1 ParB/RepB/Spo0J family partition protein -
FR753_RS27070 () 136171..136602 + 432 WP_008324186.1 conjugation system SOS inhibitor PsiB -
FR753_RS27075 () 136599..137327 + 729 WP_008324185.1 plasmid SOS inhibition protein A -
FR753_RS27080 () 137324..137647 + 324 WP_008324183.1 hypothetical protein -
FR753_RS27085 () 137709..138049 + 341 Protein_144 hypothetical protein -
FR753_RS27090 () 138696..139070 + 375 WP_008324180.1 hypothetical protein -
FR753_RS27095 () 139124..139411 + 288 WP_008324178.1 hypothetical protein -
FR753_RS27100 () 139458..139802 + 345 WP_022652252.1 hypothetical protein -
FR753_RS27105 () 139888..140151 + 264 WP_008324174.1 hypothetical protein -
FR753_RS27110 () 140194..141024 + 831 WP_022652253.1 type I restriction-modification system subunit M -
FR753_RS27115 () 141651..142181 + 531 WP_008324170.1 antirestriction protein -
FR753_RS27120 () 142228..142704 - 477 WP_008324168.1 hypothetical protein VF
FR753_RS27125 () 143136..143528 + 393 WP_008324167.1 relaxosome protein TraM -
FR753_RS27130 () 143717..144406 + 690 WP_008324166.1 hypothetical protein -
FR753_RS27135 () 144493..144717 + 225 WP_008324165.1 TraY domain-containing protein -
FR753_RS27140 () 144775..145125 + 351 WP_008324162.1 type IV conjugative transfer system pilin TraA -
FR753_RS27145 () 145276..145581 + 306 WP_008324160.1 type IV conjugative transfer system protein TraL -
FR753_RS27150 () 145596..146162 + 567 WP_008324158.1 type IV conjugative transfer system protein TraE -
FR753_RS27155 () 146149..146892 + 744 WP_008324157.1 type-F conjugative transfer system secretin TraK -
FR753_RS27160 () 146879..148273 + 1395 WP_008324156.1 conjugal transfer protein TraB -
FR753_RS27165 () 148295..148834 + 540 WP_008324154.1 type IV conjugative transfer system lipoprotein TraV -
FR753_RS27170 () 148954..149178 + 225 WP_008324141.1 TraR/DksA C4-type zinc finger protein -
FR753_RS27175 () 149182..149367 + 186 WP_022652254.1 hypothetical protein -
FR753_RS27180 () 149351..149752 + 402 WP_008324137.1 hypothetical protein -
FR753_RS27185 () 149742..150308 + 567 WP_008324135.1 conjugal transfer protein TraP -
FR753_RS27190 () 150301..152931 + 2631 WP_008324134.1 type IV secretion system protein TraC -
FR753_RS27195 () 152928..153275 + 348 WP_008324133.1 type-F conjugative transfer system protein TrbI -
FR753_RS27200 () 153275..153922 + 648 WP_008324132.1 type-F conjugative transfer system protein TraW -
FR753_RS27205 () 153925..154911 + 987 WP_032160671.1 conjugal transfer pilus assembly protein TraU -
FR753_RS27210 () 154928..155557 + 630 WP_008324130.1 type-F conjugative transfer system pilin assembly protein TrbC -
FR753_RS27215 () 155554..157407 + 1854 WP_022652255.1 type-F conjugative transfer system mating-pair stabilization protein TraN -
FR753_RS27220 () 157439..157627 + 189 WP_008324128.1 hypothetical protein -
FR753_RS27225 () 157658..158407 + 750 WP_008324127.1 type-F conjugative transfer system pilin assembly protein TraF -
FR753_RS27230 () 158424..158672 + 249 WP_008324126.1 type-F conjugative transfer system pilin chaperone TraQ -
FR753_RS27235 () 158662..159216 + 555 WP_008324125.1 type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB -
FR753_RS27240 () 159209..159637 + 429 WP_008324122.1 hypothetical protein -
FR753_RS27245 () 159624..160994 + 1371 WP_016247527.1 conjugal transfer protein TraH -
FR753_RS27250 () 160994..163816 + 2823 WP_008324119.1 conjugal transfer mating pair stabilization protein TraG -
FR753_RS27255 () 163838..164269 + 432 WP_008324118.1 entry exclusion protein -
FR753_RS27260 () 164344..165018 + 675 WP_008324909.1 Secretory immunoglobulin A-binding protein EsiB VF
FR753_RS27265 () 165152..167353 + 2202 WP_023307203.1 type IV conjugative transfer system coupling protein TraD -
FR753_RS27270 () 167353..172593 + 5241 WP_151532710.1 Multifunctional conjugation protein TraI Relaxase
FR753_RS27275 () 172595..173332 + 738 WP_008324912.1 type-F conjugative transfer system pilin acetylase TraX -
FR753_RS27280 () 173399..174118 + 720 WP_022652258.1 fertility inhibition protein FinO -
FR753_RS27285 () 174111..174902 + 792 WP_008324924.1 DsbA family protein -
FR753_RS27290 () 175050..175595 + 546 WP_008324931.1 Phospholipase D VF
FR753_RS27295 () 175747..176025 + 279 WP_008324932.1 replication regulatory protein RepA -
FR753_RS27300 () 176244..176321 + 78 WP_011201829.1 RepA leader peptide Tap -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance