MGE detailed information
MGE type: Genomic_island MGE length: 28495 bp
Accession: NZ_CP042352 Location: 4505882..4534376 Organism: Escherichia coli strain RM9513 Replicon: chromosome
Accession: NZ_CP042352 Location: 4505882..4534376 Organism: Escherichia coli strain RM9513 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FS836_RS21970 (4501369) | 4501369..4502410 | + | 1042 | Protein_4180 | IS481 family transposase | - |
| FS836_RS21975 (4502445) | 4502445..4502930 | - | 486 | WP_032267575.1 | hypothetical protein | - |
| FS836_RS21980 (4503015) | 4503015..4505885 | - | 2871 | WP_032267576.1 | DEAD/DEAH box helicase family protein | - |
| FS836_RS21985 (4505882) | 4505882..4507498 | - | 1617 | WP_032267577.1 | site-specific DNA-methyltransferase | - |
| FS836_RS21990 (4507509) | 4507509..4509821 | - | 2313 | WP_247174542.1 | S8 family peptidase | - |
| FS836_RS21995 (4509906) | 4509906..4510886 | - | 981 | WP_032267579.1 | ATP-binding protein | - |
| FS836_RS22000 (4510912) | 4510912..4513761 | - | 2850 | WP_072004755.1 | SNF2-related protein | - |
| FS836_RS22005 (4513985) | 4513985..4514371 | - | 387 | Protein_4187 | putative zinc ribbon protein | - |
| FS836_RS22010 (4514575) | 4514575..4515228 | - | 654 | WP_032267580.1 | inovirus Gp2 family protein | - |
| FS836_RS22015 (4515654) | 4515654..4516241 | - | 588 | WP_032267581.1 | hypothetical protein | - |
| FS836_RS22020 (4516335) | 4516335..4516541 | - | 207 | WP_032267582.1 | AlpA family transcriptional regulator | - |
| FS836_RS22025 (4516999) | 4516999..4518066 | + | 1068 | WP_032267583.1 | hypothetical protein | - |
| FS836_RS22030 (4518189) | 4518189..4519064 | + | 876 | WP_032267584.1 | GTPase family protein | - |
| FS836_RS22035 (4519325) | 4519325..4520038 | + | 714 | WP_000075763.1 | sporulation transcriptional regulator SpoIIID | - |
| FS836_RS22040 (4520035) | 4520035..4520670 | + | 636 | WP_032267586.1 | hypothetical protein | - |
| FS836_RS22045 (4520709) | 4520709..4521164 | + | 456 | WP_057688286.1 | hypothetical protein | - |
| FS836_RS22050 (4521161) | 4521161..4521295 | + | 135 | WP_255380262.1 | hypothetical protein | - |
| FS836_RS22055 (4521334) | 4521334..4521621 | + | 288 | WP_235839820.1 | hypothetical protein | - |
| FS836_RS22060 (4521688) | 4521688..4522227 | + | 540 | WP_032267588.1 | DUF4339 domain-containing protein | - |
| FS836_RS22065 (4522322) | 4522322..4522795 | + | 474 | WP_032267589.1 | hypothetical protein | - |
| FS836_RS22070 (4522916) | 4522916..4523737 | + | 822 | WP_032267590.1 | DUF932 domain-containing protein | - |
| FS836_RS22075 (4523768) | 4523768..4524211 | + | 444 | WP_032267591.1 | antirestriction protein | - |
| FS836_RS22080 (4524224) | 4524224..4524766 | + | 543 | WP_032267592.1 | DNA repair protein RadC | - |
| FS836_RS22085 (4524777) | 4524777..4525118 | + | 342 | WP_032267593.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| FS836_RS22090 (4525139) | 4525139..4525480 | + | 342 | WP_032267594.1 | TA system toxin CbtA family protein | Toxin Detail |
| FS836_RS22095 (4525731) | 4525731..4526738 | + | 1008 | WP_032267595.1 | restriction endonuclease | - |
| FS836_RS22100 (4527422) | 4527422..4527565 | - | 144 | Protein_4206 | HNH endonuclease | - |
| FS836_RS22105 (4527702) | 4527702..4528352 | + | 651 | WP_001037966.1 | HNH endonuclease | - |
| FS836_RS22110 (4528360) | 4528360..4529340 | - | 981 | WP_001295601.1 | sialate O-acetylesterase | - |
| FS836_RS22115 (4529405) | 4529405..4530511 | - | 1107 | WP_001315214.1 | N-acetylneuraminate epimerase | - |
| FS836_RS22120 (4530531) | 4530531..4531247 | - | 717 | WP_001360088.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| FS836_RS22125 (4532701) | 4532701..4533303 | + | 603 | WP_000790583.1 | type 1 fimbria switch DNA invertase FimB | - |
| FS836_RS22130 (4533780) | 4533780..4534376 | + | 597 | WP_000044711.1 | type 1 fimbria switch DNA invertase FimE | - |
| FS836_RS22135 (4534858) | 4534858..4535412 | + | 555 | WP_000695589.1 | type 1 fimbrial major subunit FimA | - |
| FS836_RS22140 (4535477) | 4535477..4536016 | + | 540 | WP_000824114.1 | fimbrial protein | - |
| FS836_RS22145 (4536053) | 4536053..4536778 | + | 726 | WP_000066560.1 | type 1 fimbria chaperone FimC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|