MGE detailed information
MGE type: Prophage MGE length: 40501 bp
Accession: NZ_CP042352 Location: 1419975..1460475 Organism: Escherichia coli strain RM9513 Replicon: chromosome
Accession: NZ_CP042352 Location: 1419975..1460475 Organism: Escherichia coli strain RM9513 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FS836_RS07215 (1415964) | 1415964..1416011 | + | 48 | WP_211180494.1 | protein YnaN | - |
| FS836_RS07220 (1416025) | 1416025..1417008 | + | 984 | WP_000387388.1 | zinc transporter ZntB | - |
| FS836_RS07225 (1417486) | 1417486..1418859 | + | 1374 | WP_000123737.1 | ATP-dependent RNA helicase DbpA | - |
| FS836_RS07230 (1418988) | 1418988..1419923 | - | 936 | WP_001157377.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| FS836_RS07235 (1419975) | 1419975..1421210 | - | 1236 | WP_265467720.1 | site-specific integrase | - |
| FS836_RS07240 (1421212) | 1421212..1421427 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| - (1421531) | 1421531..1421709 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (1421531) | 1421531..1421709 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (1421531) | 1421531..1421709 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (1421531) | 1421531..1421709 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| FS836_RS07245 (1421527) | 1421527..1421715 | - | 189 | WP_001302840.1 | DUF1187 family protein | - |
| FS836_RS07250 (1421708) | 1421708..1421902 | - | 195 | WP_072130784.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| FS836_RS07255 (1421959) | 1421959..1422792 | - | 834 | WP_047671513.1 | recombination protein RecT | - |
| FS836_RS07260 (1422785) | 1422785..1425436 | - | 2652 | WP_137445568.1 | exodeoxyribonuclease VIII | - |
| FS836_RS07265 (1425538) | 1425538..1425813 | - | 276 | WP_032218014.1 | hypothetical protein | - |
| FS836_RS07270 (1425888) | 1425888..1426064 | - | 177 | WP_032218016.1 | YdaE family protein | - |
| FS836_RS07275 (1426058) | 1426058..1426279 | - | 222 | WP_000560226.1 | killing protein KilR | - |
| FS836_RS07280 (1426718) | 1426718..1427207 | + | 490 | Protein_1323 | superinfection exclusion B family protein | - |
| FS836_RS07285 (1427204) | 1427204..1427359 | - | 156 | WP_074388718.1 | DUF1391 family protein | - |
| FS836_RS07290 (1427491) | 1427491..1427769 | - | 279 | WP_047671515.1 | hypothetical protein | - |
| FS836_RS07295 (1427931) | 1427931..1428338 | - | 408 | WP_047662223.1 | helix-turn-helix domain-containing protein | - |
| FS836_RS07300 (1428418) | 1428418..1428645 | + | 228 | WP_047662222.1 | Cro/CI family transcriptional regulator | - |
| FS836_RS07305 (1428629) | 1428629..1429051 | + | 423 | WP_064221561.1 | toxin YdaT family protein | - |
| FS836_RS07310 (1429130) | 1429130..1429918 | + | 789 | WP_057697085.1 | hypothetical protein | - |
| FS836_RS07315 (1429925) | 1429925..1430671 | + | 747 | WP_265467726.1 | ATP-binding protein | - |
| FS836_RS07320 (1430694) | 1430694..1431419 | + | 726 | WP_000450652.1 | DUF1627 domain-containing protein | - |
| FS836_RS07325 (1431436) | 1431436..1431858 | + | 423 | WP_021554373.1 | DUF977 family protein | - |
| FS836_RS07330 (1432068) | 1432068..1433429 | + | 1362 | WP_021554374.1 | anti-phage deoxyguanosine triphosphatase | - |
| FS836_RS07335 (1433840) | 1433840..1434733 | + | 894 | WP_021554375.1 | hypothetical protein | - |
| FS836_RS07340 (1434974) | 1434974..1436200 | - | 1227 | WP_024238817.1 | hypothetical protein | - |
| FS836_RS07345 (1437142) | 1437142..1437618 | + | 477 | WP_157924236.1 | DUF4145 domain-containing protein | - |
| FS836_RS07350 (1438115) | 1438115..1438270 | + | 156 | WP_001406927.1 | type I toxin-antitoxin system toxin HokD | - |
| FS836_RS07355 (1438516) | 1438516..1438776 | + | 261 | WP_032218041.1 | hypothetical protein | - |
| FS836_RS07360 (1438843) | 1438843..1439442 | + | 600 | WP_265467731.1 | DUF1367 family protein | - |
| FS836_RS07365 (1439442) | 1439442..1439732 | + | 291 | WP_000228038.1 | DUF1364 domain-containing protein | - |
| FS836_RS07370 (1439729) | 1439729..1440271 | + | 543 | WP_000640144.1 | DUF1133 family protein | - |
| FS836_RS07375 (1440493) | 1440493..1441062 | + | 570 | WP_265467733.1 | hypothetical protein | - |
| FS836_RS07380 (1441031) | 1441031..1441246 | - | 216 | WP_152948782.1 | hypothetical protein | - |
| FS836_RS07385 (1441410) | 1441410..1441751 | + | 342 | WP_000781775.1 | phage holin, lambda family | - |
| FS836_RS07390 (1441755) | 1441755..1442231 | + | 477 | WP_001194112.1 | glycoside hydrolase family protein | - |
| FS836_RS07395 (1442448) | 1442448..1442633 | + | 186 | WP_001228688.1 | prophage lysis lipoprotein RzoD | - |
| FS836_RS07400 (1442830) | 1442830..1444287 | + | 1458 | WP_001742942.1 | Trk system potassium transporter TrkG | - |
| FS836_RS07405 (1444425) | 1444425..1445216 | + | 792 | WP_001291105.1 | ParB/Srx family N-terminal domain-containing protein | - |
| FS836_RS07410 (1445209) | 1445209..1446141 | + | 933 | WP_001204028.1 | hypothetical protein | - |
| FS836_RS07415 (1446119) | 1446119..1446328 | + | 210 | WP_000126788.1 | hypothetical protein | - |
| FS836_RS07420 (1446332) | 1446332..1447426 | + | 1095 | WP_000089447.1 | terminase small subunit | - |
| FS836_RS07425 (1447407) | 1447407..1448708 | + | 1302 | Protein_1352 | terminase family protein | - |
| FS836_RS07430 (1448711) | 1448711..1450117 | + | 1407 | WP_000763702.1 | DUF4055 domain-containing protein | - |
| FS836_RS07435 (1450101) | 1450101..1451213 | + | 1113 | WP_001470067.1 | phage minor head protein | - |
| FS836_RS07440 (1451318) | 1451318..1452082 | + | 765 | WP_000770042.1 | hypothetical protein | - |
| FS836_RS07445 (1452181) | 1452181..1453320 | + | 1140 | WP_000918487.1 | P22 phage major capsid protein family protein | - |
| FS836_RS07450 (1453363) | 1453363..1453539 | + | 177 | WP_000908084.1 | hypothetical protein | - |
| FS836_RS07455 (1453543) | 1453543..1453938 | + | 396 | WP_000634214.1 | hypothetical protein | - |
| FS836_RS07460 (1453938) | 1453938..1454321 | + | 384 | WP_000524260.1 | hypothetical protein | - |
| FS836_RS07465 (1454322) | 1454322..1454702 | + | 381 | WP_001029815.1 | hypothetical protein | - |
| FS836_RS07470 (1454699) | 1454699..1455091 | + | 393 | WP_021546825.1 | phage tail terminator-like protein | - |
| FS836_RS07475 (1455118) | 1455118..1456080 | + | 963 | WP_001328756.1 | phage tail tube protein | - |
| FS836_RS07480 (1456231) | 1456231..1456590 | + | 360 | WP_122452218.1 | protein YdaY | - |
| FS836_RS07485 (1456698) | 1456698..1456898 | + | 201 | WP_032139919.1 | hypothetical protein | - |
| FS836_RS07490 (1457062) | 1457062..1459212 | + | 2151 | WP_241325263.1 | phage tail length tape measure family protein | - |
| FS836_RS07495 (1459212) | 1459212..1459787 | + | 576 | WP_137445435.1 | tail fiber assembly protein | - |
| FS836_RS07500 (1459885) | 1459885..1460475 | - | 591 | WP_000086527.1 | recombinase family protein | - |
| FS836_RS07505 (1460792) | 1460792..1461025 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| FS836_RS07510 (1461094) | 1461094..1461207 | - | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| FS836_RS07515 (1461986) | 1461986..1462420 | - | 435 | WP_001300461.1 | universal stress protein UspF | - |
| FS836_RS07520 (1462561) | 1462561..1463693 | - | 1133 | Protein_1371 | porin OmpN | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|