MGE detailed information
MGE type: Prophage MGE length: 42269 bp
Accession: NZ_CP042350 Location: 5074747..5117015 Organism: Escherichia coli strain RM10410 Replicon: chromosome
Accession: NZ_CP042350 Location: 5074747..5117015 Organism: Escherichia coli strain RM10410 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FS611_RS25375 () | 5069871..5070314 | - | 444 | WP_000786398.1 | DNA polymerase III subunit chi | - |
| FS611_RS25380 () | 5070668..5072179 | - | 1512 | WP_000397144.1 | leucyl aminopeptidase | - |
| FS611_RS25385 () | 5072446..5073546 | + | 1101 | WP_000584109.1 | LPS export ABC transporter permease LptF | - |
| FS611_RS25390 () | 5073546..5074628 | + | 1083 | WP_001295681.1 | LPS export ABC transporter permease LptG | - |
| FS611_RS25395 () | 5074747..5076249 | - | 1503 | WP_001332879.1 | DUF853 domain-containing protein | - |
| FS611_RS25400 () | 5076379..5077398 | - | 1020 | WP_000061768.1 | NADPH-dependent aldehyde reductase Ahr | - |
| FS611_RS25410 () | 5077769..5079679 | + | 1911 | WP_000083138.1 | hypothetical protein ; Integrase | Integrase |
| FS611_RS25415 () | 5079812..5080144 | - | 333 | WP_001261095.1 | NIPSNAP family protein | - |
| FS611_RS25420 () | 5081151..5081480 | - | 330 | WP_000085626.1 | DUF1643 domain-containing protein | - |
| FS611_RS25425 () | 5081810..5082370 | + | 561 | WP_033801357.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| FS611_RS25430 () | 5082384..5083229 | + | 846 | WP_000331917.1 | hypothetical protein | - |
| FS611_RS25435 () | 5083290..5083784 | - | 495 | WP_000145203.1 | membrane protein | - |
| FS611_RS25440 () | 5084025..5084489 | + | 465 | WP_000749342.1 | helix-turn-helix domain-containing protein | - |
| FS611_RS25445 () | 5085527..5086351 | + | 825 | WP_000594911.1 | hypothetical protein | - |
| FS611_RS25450 () | 5086400..5086972 | - | 573 | WP_000227281.1 | hypothetical protein | - |
| FS611_RS25455 () | 5087073..5087330 | + | 258 | Protein_4829 | IS3 family transposase IS911 | Transposase |
| FS611_RS25460 () | 5087343..5088494 | - | 1152 | WP_001254876.1 | IS30 family transposase IS30D | Transposase |
| FS611_RS25465 () | 5088558..5089771 | + | 1214 | WP_187269840.1 | IS3 family transposase IS1203 | Transposase |
| FS611_RS25470 () | 5089872..5090776 | + | 905 | Protein_4832 | IS3 family transposase | - |
| FS611_RS25475 () | 5090859..5091116 | + | 258 | WP_000177060.1 | hypothetical protein | - |
| FS611_RS25480 () | 5091674..5092441 | - | 768 | WP_000175457.1 | Fe(3+) dicitrate transport ATP-binding protein FecE | VF |
| FS611_RS25485 () | 5092442..5093398 | - | 957 | WP_000684856.1 | Fe(3+) dicitrate transport system permease protein FecD | VF |
| FS611_RS25490 () | 5093395..5094393 | - | 999 | WP_000125187.1 | Fe(3+) dicitrate transport system permease protein FecC | VF |
| FS611_RS25495 () | 5094390..5095292 | - | 903 | WP_000879164.1 | Fe(3+) dicitrate ABC transporter substrate-binding protein FecB | - |
| FS611_RS25500 () | 5095337..5097661 | - | 2325 | WP_000188267.1 | Fe(3+) dicitrate transport protein FecA | - |
| FS611_RS25505 () | 5097748..5098701 | - | 954 | WP_001068910.1 | fec operon regulator FecR | - |
| FS611_RS25510 () | 5098698..5099219 | - | 522 | WP_001283626.1 | putative RNA polymerase sigma factor FecI | VF |
| FS611_RS25515 () | 5099511..5100208 | + | 698 | Protein_4841 | IS1 family transposase | - |
| FS611_RS25520 () | 5100228..5100293 | - | 66 | Protein_4842 | omptin family outer membrane protease | - |
| FS611_RS25525 () | 5100526..5100630 | + | 105 | Protein_4843 | IS3 family transposase | - |
| FS611_RS25535 () | 5100969..5101226 | + | 258 | WP_000555341.1 | hypothetical protein | - |
| FS611_RS25545 () | 5101545..5101676 | - | 132 | Protein_4845 | IS3 family transposase | - |
| FS611_RS25550 () | 5101958..5102158 | + | 201 | WP_000823256.1 | hypothetical protein | - |
| FS611_RS25555 () | 5102367..5102492 | - | 126 | Protein_4847 | hemolysin activation protein | - |
| FS611_RS26395 () | 5103240..5103446 | + | 207 | Protein_4848 | autotransporter domain-containing protein | - |
| FS611_RS25570 () | 5103567..5105102 | + | 1536 | WP_000939409.1 | hypothetical protein | - |
| FS611_RS25575 () | 5105087..5105257 | + | 171 | Protein_4850 | antirestriction protein | - |
| FS611_RS25580 () | 5105273..5105749 | + | 477 | WP_001186774.1 | RadC family protein | - |
| FS611_RS25585 () | 5105812..5106033 | + | 222 | WP_000692345.1 | DUF987 domain-containing protein | - |
| FS611_RS25590 () | 5106196..5106564 | + | 369 | WP_001315620.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| FS611_RS25595 () | 5106654..5107028 | + | 375 | WP_000854753.1 | TA system toxin CbtA family protein | Toxin Detail |
| FS611_RS25600 () | 5107025..5107513 | + | 489 | WP_000777547.1 | hypothetical protein | - |
| FS611_RS25605 () | 5107525..5107722 | + | 198 | WP_000839281.1 | DUF957 domain-containing protein | - |
| FS611_RS25615 () | 5109261..5109395 | + | 135 | Protein_4858 | transcriptional regulator | - |
| FS611_RS25635 () | 5110339..5110989 | + | 651 | WP_001037966.1 | HNH endonuclease | - |
| FS611_RS25640 () | 5110997..5111977 | - | 981 | WP_000991415.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| FS611_RS25645 () | 5112042..5113148 | - | 1107 | WP_001341302.1 | N-acetylneuraminate epimerase | - |
| FS611_RS25650 () | 5113168..5113884 | - | 717 | WP_001443018.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| FS611_RS25655 () | 5115339..5115941 | + | 603 | WP_000790583.1 | Tyrosine recombinase XerC | VF |
| FS611_RS25660 () | 5116419..5117015 | + | 597 | WP_000044711.1 | Tyrosine recombinase XerD | VF |
| FS611_RS25665 () | 5117496..5118044 | + | 549 | WP_000695546.1 | type 1 fimbrial major subunit FimA | - |
| FS611_RS25670 () | 5118109..5118648 | + | 540 | WP_000824105.1 | type 1 fimbrial protein | - |
| FS611_RS25675 () | 5118685..5119410 | + | 726 | WP_000066560.1 | type 1 fimbria chaperone FimC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|