MGE detailed information
MGE type: IScluster/Tn MGE length: 12388 bp
Accession: NZ_CP042350 Location: 1765606..1777993 Organism: Escherichia coli strain RM10410 Replicon: chromosome
Accession: NZ_CP042350 Location: 1765606..1777993 Organism: Escherichia coli strain RM10410 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FS611_RS08795 () | 1760827..1761042 | - | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| FS611_RS08800 () | 1761783..1761998 | - | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| FS611_RS08805 () | 1762299..1762511 | + | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| FS611_RS08810 () | 1762566..1762655 | + | 90 | WP_120795389.1 | hypothetical protein | - |
| FS611_RS08815 () | 1762933..1763685 | - | 753 | WP_001047135.1 | antitermination protein | - |
| FS611_RS08820 () | 1763699..1764748 | - | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| FS611_RS08825 () | 1764750..1765028 | - | 279 | WP_012304870.1 | hypothetical protein | - |
| FS611_RS08830 () | 1765095..1765346 | - | 252 | WP_000980994.1 | hypothetical protein | - |
| FS611_RS08835 () | 1765606..1766718 | + | 1113 | WP_001300563.1 | IS4 family transposase IS421 | Transposase |
| FS611_RS08840 () | 1766913..1767068 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| FS611_RS08845 () | 1767140..1767427 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| FS611_RS08850 () | 1767427..1767666 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| FS611_RS08855 () | 1767691..1767963 | + | 273 | WP_072033201.1 | hypothetical protein | - |
| FS611_RS08860 () | 1768005..1769233 | + | 1229 | WP_088895425.1 | IS3 family transposase IS2 | Transposase |
| FS611_RS08865 () | 1769535..1769867 | + | 333 | WP_001301033.1 | protein FlxA | - |
| FS611_RS08870 () | 1770304..1771617 | - | 1314 | WP_000589005.1 | ISNCY family transposase ISCARN112 | Transposase |
| FS611_RS08885 () | 1773284..1773442 | - | 159 | Protein_1691 | class I SAM-dependent methyltransferase | - |
| FS611_RS08895 () | 1774750..1774953 | - | 204 | Protein_1693 | class I SAM-dependent methyltransferase | - |
| FS611_RS08900 () | 1774950..1775201 | - | 252 | Protein_1694 | DUF977 family protein | - |
| FS611_RS08905 () | 1775140..1775571 | + | 432 | Protein_1695 | exonuclease | - |
| FS611_RS08910 () | 1775614..1776510 | - | 897 | Protein_1696 | IS3 family transposase ISSd1 | Transposase |
| FS611_RS08915 () | 1776517..1777668 | - | 1152 | WP_001254876.1 | IS30 family transposase IS30D | Transposase |
| FS611_RS08920 () | 1777733..1777993 | - | 261 | Protein_1698 | IS3 family transposase ISSfl10 | Transposase |
| FS611_RS08925 () | 1778059..1779663 | + | 1605 | Protein_1699 | 3'-5' exoribonuclease | - |
| FS611_RS08930 () | 1779736..1779987 | + | 252 | WP_000005552.1 | excisionase family protein | - |
| FS611_RS08935 () | 1780022..1781302 | + | 1281 | WP_000876958.1 | site-specific integrase | - |
| FS611_RS08940 () | 1781322..1781432 | - | 111 | WP_001360138.1 | hypothetical protein | - |
| FS611_RS08945 () | 1781490..1782509 | - | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|