MGE detailed information
MGE type: Prophage MGE length: 38629 bp
Accession: NZ_CP042350 Location: 1747836..1786464 Organism: Escherichia coli strain RM10410 Replicon: chromosome
Accession: NZ_CP042350 Location: 1747836..1786464 Organism: Escherichia coli strain RM10410 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FS611_RS08660 () | 1743589..1743981 | - | 393 | WP_000671737.1 | YdeI family stress tolerance OB fold protein | - |
| FS611_RS08665 () | 1744257..1744775 | + | 519 | WP_001024746.1 | 2-oxo-tetronate isomerase | - |
| FS611_RS08670 () | 1744819..1746864 | - | 2046 | WP_040077763.1 | peptidyl-dipeptidase Dcp | - |
| FS611_RS08675 () | 1747001..1747747 | + | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| FS611_RS08680 () | 1747836..1748522 | + | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| FS611_RS08685 () | 1748699..1748902 | + | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| FS611_RS08690 () | 1748937..1750397 | - | 1461 | WP_000527809.1 | mannitol dehydrogenase family protein | - |
| FS611_RS08695 () | 1750486..1751769 | - | 1284 | Protein_1656 | MHS family MFS transporter YdfJ | - |
| FS611_RS08700 () | 1752373..1752486 | + | 114 | WP_120795384.1 | hypothetical protein | - |
| FS611_RS08705 () | 1752555..1752788 | + | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| FS611_RS08710 () | 1753105..1753695 | + | 591 | WP_000086522.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| FS611_RS08715 () | 1753881..1755088 | + | 1208 | WP_094250091.1 | IS3 family transposase ISEc48 | Transposase |
| FS611_RS08720 () | 1755144..1755719 | - | 576 | WP_000885600.1 | tail fiber assembly protein | - |
| FS611_RS08725 () | 1755719..1756027 | - | 309 | WP_071524888.1 | phage tail protein | - |
| FS611_RS08730 () | 1755994..1756320 | - | 327 | Protein_1663 | phage tail protein | - |
| FS611_RS08735 () | 1756278..1756823 | - | 546 | WP_000453589.1 | DNA-packaging protein | - |
| FS611_RS08745 () | 1757212..1757445 | + | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| FS611_RS08750 () | 1757503..1757913 | + | 411 | WP_033801485.1 | DUF1398 domain-containing protein | - |
| FS611_RS08755 () | 1758065..1758238 | - | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| FS611_RS08760 () | 1758410..1758565 | - | 156 | WP_001309517.1 | hypothetical protein | - |
| FS611_RS08765 () | 1758645..1758710 | - | 66 | WP_120795388.1 | hypothetical protein | - |
| FS611_RS08770 () | 1758713..1758901 | - | 189 | WP_071524604.1 | cold-shock protein | - |
| FS611_RS08775 () | 1758912..1759124 | - | 213 | WP_000066495.1 | cold shock protein CspI | - |
| FS611_RS08780 () | 1759487..1759984 | - | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| FS611_RS08785 () | 1759981..1760514 | - | 534 | WP_001092971.1 | lysozyme | - |
| FS611_RS08790 () | 1760511..1760822 | - | 312 | WP_000189916.1 | YdfR family protein | - |
| FS611_RS08795 () | 1760827..1761042 | - | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| FS611_RS08800 () | 1761783..1761998 | - | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| FS611_RS08805 () | 1762299..1762511 | + | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| FS611_RS08810 () | 1762566..1762655 | + | 90 | WP_120795389.1 | hypothetical protein | - |
| FS611_RS08815 () | 1762933..1763685 | - | 753 | WP_001047135.1 | antitermination protein | - |
| FS611_RS08820 () | 1763699..1764748 | - | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| FS611_RS08825 () | 1764750..1765028 | - | 279 | WP_012304870.1 | hypothetical protein | - |
| FS611_RS08830 () | 1765095..1765346 | - | 252 | WP_000980994.1 | hypothetical protein | - |
| FS611_RS08835 () | 1765606..1766718 | + | 1113 | WP_001300563.1 | IS4 family transposase IS421 | Transposase |
| FS611_RS08840 () | 1766913..1767068 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| FS611_RS08845 () | 1767140..1767427 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| FS611_RS08850 () | 1767427..1767666 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| FS611_RS08855 () | 1767691..1767963 | + | 273 | WP_072033201.1 | hypothetical protein | - |
| FS611_RS08860 () | 1768005..1769233 | + | 1229 | WP_088895425.1 | IS3 family transposase IS2 | Transposase |
| FS611_RS08865 () | 1769535..1769867 | + | 333 | WP_001301033.1 | protein FlxA | - |
| FS611_RS08870 () | 1770304..1771617 | - | 1314 | WP_000589005.1 | ISNCY family transposase ISCARN112 | Transposase |
| FS611_RS08885 () | 1773284..1773442 | - | 159 | Protein_1691 | class I SAM-dependent methyltransferase | - |
| FS611_RS08895 () | 1774750..1774953 | - | 204 | Protein_1693 | class I SAM-dependent methyltransferase | - |
| FS611_RS08900 () | 1774950..1775201 | - | 252 | Protein_1694 | DUF977 family protein | - |
| FS611_RS08905 () | 1775140..1775571 | + | 432 | Protein_1695 | exonuclease | - |
| FS611_RS08910 () | 1775614..1776510 | - | 897 | Protein_1696 | IS3 family transposase ISSd1 | Transposase |
| FS611_RS08915 () | 1776517..1777668 | - | 1152 | WP_001254876.1 | IS30 family transposase IS30D | Transposase |
| FS611_RS08920 () | 1777733..1777993 | - | 261 | Protein_1698 | IS3 family transposase ISSfl10 | Transposase |
| FS611_RS08925 () | 1778059..1779663 | + | 1605 | Protein_1699 | 3'-5' exoribonuclease | - |
| FS611_RS08930 () | 1779736..1779987 | + | 252 | WP_000005552.1 | excisionase family protein | - |
| FS611_RS08935 () | 1780022..1781302 | + | 1281 | WP_000876958.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| FS611_RS08940 () | 1781322..1781432 | - | 111 | WP_001360138.1 | hypothetical protein | - |
| FS611_RS08945 () | 1781490..1782509 | - | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| FS611_RS08950 () | 1782521..1783735 | - | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| FS611_RS08955 () | 1783941..1784267 | - | 327 | WP_000598292.1 | YnfA family protein | - |
| FS611_RS08960 () | 1784402..1784743 | + | 342 | WP_000705211.1 | DUF1283 family protein | - |
| FS611_RS08965 () | 1784778..1785338 | + | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| FS611_RS08970 () | 1785341..1786051 | - | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| FS611_RS08975 () | 1786159..1786464 | + | 306 | WP_001300836.1 | DUF1161 domain-containing protein | - |
| FS611_RS08980 () | 1786663..1788120 | + | 1458 | WP_072300573.1 | molybdopterin-dependent oxidoreductase | - |
| FS611_RS08985 () | 1788805..1789794 | - | 990 | WP_000207512.1 | hypothetical protein | - |
| FS611_RS08990 () | 1789879..1790367 | - | 489 | WP_040078134.1 | hypothetical protein | - |
| FS611_RS09000 () | 1790688..1791086 | - | 399 | Protein_1713 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|