MGE detailed information
MGE type: IScluster/Tn MGE length: 7353 bp
Accession: NZ_CP042298 Location: 3990695..3998047 Organism: Escherichia coli strain RM9088 Replicon: chromosome
Accession: NZ_CP042298 Location: 3990695..3998047 Organism: Escherichia coli strain RM9088 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FRV13_RS21715 () | 3986212..3986583 | + | 372 | WP_000820125.1 | type II secretion system minor pseudopilin GspI | - |
| FRV13_RS21720 () | 3986580..3987185 | + | 606 | WP_001255041.1 | type II secretion system minor pseudopilin GspJ | - |
| FRV13_RS21725 () | 3987182..3988159 | + | 978 | WP_148050680.1 | type II secretion system minor pseudopilin GspK | - |
| FRV13_RS21730 () | 3988156..3989334 | + | 1179 | WP_047084649.1 | type II secretion system protein GspL | - |
| FRV13_RS21735 () | 3989336..3989872 | + | 537 | WP_001411126.1 | GspM family type II secretion system protein YghD | - |
| FRV13_RS21740 () | 3990153..3990611 | - | 459 | Protein_3898 | DUF4942 domain-containing protein | - |
| FRV13_RS21750 () | 3990665..3991342 | + | 678 | WP_001339397.1 | IS66 family transposase ISCro1 | Transposase |
| FRV13_RS21755 () | 3991342..3991689 | + | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| FRV13_RS21760 () | 3991709..3993280 | + | 1572 | WP_000381395.1 | IS66 family transposase ISCro1 | Transposase |
| FRV13_RS28375 () | 3993355..3993429 | - | 75 | Protein_3902 | restriction endonuclease subunit M | - |
| FRV13_RS21765 () | 3993526..3993723 | - | 198 | WP_000839281.1 | DUF957 domain-containing protein | - |
| FRV13_RS21770 () | 3993735..3994223 | - | 489 | WP_000777541.1 | hypothetical protein | - |
| FRV13_RS21775 () | 3994220..3994594 | - | 375 | WP_000854753.1 | TA system toxin CbtA family protein | Toxin Detail |
| FRV13_RS21780 () | 3994684..3995052 | - | 369 | WP_001278232.1 | type IV toxin-antitoxin system toxin CbtA | Antitoxin Detail |
| FRV13_RS21785 () | 3995215..3995436 | - | 222 | WP_000692316.1 | DUF987 domain-containing protein | - |
| FRV13_RS21790 () | 3995499..3995975 | - | 477 | WP_001186726.1 | RadC family protein | - |
| FRV13_RS21795 () | 3995991..3996476 | - | 486 | WP_047084650.1 | antirestriction protein | - |
| FRV13_RS21800 () | 3996531..3996773 | - | 243 | Protein_3910 | DUF945 domain-containing protein | - |
| FRV13_RS21805 () | 3996834..3998047 | + | 1214 | WP_169302185.1 | IS3 family transposase IS629 | Transposase |
| FRV13_RS21810 () | 3998090..3998662 | - | 573 | Protein_3912 | DUF945 domain-containing protein | - |
| FRV13_RS21820 () | 3998762..3998995 | - | 234 | WP_001119729.1 | DUF905 family protein | - |
| FRV13_RS21825 () | 3999074..3999529 | - | 456 | WP_000581504.1 | hypothetical protein | - |
| FRV13_RS21830 () | 3999605..4002121 | - | 2517 | WP_001577200.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|