MGE detailed information
MGE type: IScluster/Tn MGE length: 24311 bp
Accession: NZ_CP042296 Location: 103116..127426 Organism: Escherichia coli strain RM9088 Replicon: plasmid p1RM9088
Accession: NZ_CP042296 Location: 103116..127426 Organism: Escherichia coli strain RM9088 Replicon: plasmid p1RM9088
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FRV13_RS00540 () | 98272..98694 | - | 423 | WP_042965821.1 | lysozyme family protein | - |
| FRV13_RS00545 () | 98705..99214 | - | 510 | WP_123000873.1 | type VI secretion protein | - |
| FRV13_RS00550 () | 99221..100699 | - | 1479 | WP_042965824.1 | type VI secretion system contractile sheath large subunit | - |
| FRV13_RS00555 () | 100702..101178 | - | 477 | WP_042965825.1 | type VI secretion system contractile sheath small subunit | - |
| FRV13_RS00560 () | 101716..101937 | - | 222 | WP_047085420.1 | hypothetical protein | - |
| FRV13_RS00565 () | 103232..103387 | - | 156 | Protein_104 | ISKra4 family transposase | - |
| FRV13_RS00570 () | 103447..103943 | + | 497 | Protein_105 | IS3 family transposase IS3H | Transposase |
| FRV13_RS00575 () | 104031..104761 | + | 731 | Protein_106 | IS21 family transposase IS100kyp | Transposase |
| FRV13_RS00580 () | 104826..105581 | - | 756 | WP_096913045.1 | IS21 family transposase ISEc10 | Transposase |
| FRV13_RS00585 () | 105578..107077 | - | 1500 | WP_148050543.1 | IS21 family transposase ISEc10 | Transposase |
| FRV13_RS00590 () | 107172..107468 | + | 297 | Protein_109 | IS21 family transposase IS100kyp | Transposase |
| FRV13_RS00595 () | 107465..108247 | + | 783 | WP_137486424.1 | IS21 family transposase IS100kyp | Transposase |
| FRV13_RS00605 () | 108315..108978 | + | 664 | Protein_111 | IS3 family transposase IS3F | Transposase |
| FRV13_RS00610 () | 109036..110228 | - | 1193 | Protein_112 | IS256 family transposase IS1414 | Transposase |
| FRV13_RS00615 () | 110295..111508 | + | 1214 | WP_169302185.1 | IS3 family transposase IS629 | Transposase |
| FRV13_RS00620 () | 112039..112320 | - | 282 | WP_000220564.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| FRV13_RS00625 () | 112310..112561 | - | 252 | WP_000121742.1 | hypothetical protein | Antitoxin Detail |
| FRV13_RS00630 () | 112837..113856 | - | 1020 | WP_096913040.1 | IS110 family transposase ISEc11 | Transposase |
| FRV13_RS00640 () | 114376..115485 | - | 1110 | Protein_117 | IS3 family transposase | - |
| FRV13_RS00645 () | 115565..115960 | - | 396 | Protein_118 | IS256 family transposase IS1414 | Transposase |
| FRV13_RS00650 () | 115991..117562 | - | 1572 | WP_000381395.1 | IS66 family transposase ISCro1 | Transposase |
| FRV13_RS00655 () | 117582..117929 | - | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| FRV13_RS00660 () | 117929..118606 | - | 678 | WP_001339397.1 | IS66 family transposase ISCro1 | Transposase |
| FRV13_RS00670 () | 118659..119075 | - | 417 | Protein_122 | IS256 family transposase IS1414 | Transposase |
| FRV13_RS00675 () | 119246..119866 | - | 621 | WP_000269722.1 | hypothetical protein | - |
| FRV13_RS00680 () | 120150..120362 | - | 213 | WP_001364071.1 | hypothetical protein | - |
| FRV13_RS00685 () | 120523..121032 | - | 510 | WP_042967066.1 | hypothetical protein | - |
| FRV13_RS00690 () | 121341..121545 | - | 205 | Protein_126 | hypothetical protein | - |
| FRV13_RS00695 () | 121664..122065 | - | 402 | WP_148050544.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| FRV13_RS00700 () | 121998..122255 | - | 258 | WP_000557618.1 | type II toxin-antitoxin system antitoxin PemI | - |
| FRV13_RS00705 () | 122348..122548 | - | 201 | Protein_129 | CPBP family intramembrane metalloprotease | - |
| FRV13_RS00710 () | 122629..122865 | + | 237 | WP_000460640.1 | hypothetical protein | - |
| FRV13_RS00720 () | 122915..123775 | + | 861 | WP_042967064.1 | putative protein YcjY | VF |
| FRV13_RS00725 () | 123854..125067 | + | 1214 | WP_169302185.1 | IS3 family transposase IS629 | Transposase |
| FRV13_RS00730 () | 125109..126251 | + | 1143 | Protein_133 | Catalase-peroxidase | VF |
| FRV13_RS00735 () | 126331..126684 | + | 354 | WP_170981746.1 | cytochrome b562 family protein | - |
| FRV13_RS00740 () | 126972..127079 | + | 108 | Protein_135 | IS66 family insertion sequence element accessory protein TnpB | - |
| FRV13_RS00745 () | 127076..127426 | + | 351 | WP_040091173.1 | IS66 family transposase IS682 | Transposase |
| FRV13_RS00750 () | 127967..128368 | - | 402 | WP_137486526.1 | hypothetical protein | - |
| FRV13_RS00755 () | 128450..129040 | - | 591 | WP_042967019.1 | hypothetical protein | - |
| FRV13_RS00760 () | 129669..130133 | - | 465 | WP_040090730.1 | hypothetical protein | - |
| FRV13_RS00765 () | 130412..131452 | - | 1041 | WP_139320987.1 | hypothetical protein | - |
| FRV13_RS28155 () | 131562..131750 | - | 189 | WP_169301556.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|