MGE detailed information
MGE type: Prophage MGE length: 50884 bp
Accession: NZ_CP042267 Location: 1262576..1313459 Organism: Clostridioides difficile strain Mta-79 Replicon: chromosome
Accession: NZ_CP042267 Location: 1262576..1313459 Organism: Clostridioides difficile strain Mta-79 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FQN08_RS05995 () | 1257584..1258663 | + | 1080 | WP_003438164.1 | endolytic transglycosylase MltG | - |
| FQN08_RS06000 () | 1258835..1259509 | + | 675 | WP_003438166.1 | O-methyltransferase | - |
| FQN08_RS06005 () | 1259496..1260743 | + | 1248 | WP_003438167.1 | U32 family peptidase | - |
| FQN08_RS06010 () | 1260815..1262479 | + | 1665 | WP_003438168.1 | penicillin-binding protein 2 | - |
| FQN08_RS06015 () | 1262576..1262860 | - | 285 | WP_003419254.1 | sigma-70 family RNA polymerase sigma factor | - |
| FQN08_RS06020 () | 1262883..1264400 | - | 1518 | WP_021360429.1 | hypothetical protein ; Integrase | Integrase |
| FQN08_RS06025 () | 1264525..1265346 | - | 822 | WP_021360430.1 | tetratricopeptide repeat protein | - |
| FQN08_RS06030 () | 1265537..1266964 | + | 1428 | WP_021361414.1 | N-acetylmuramoyl-L-alanine amidase LytC | VF |
| FQN08_RS06035 () | 1267114..1267266 | + | 153 | WP_009896140.1 | hypothetical protein | Toxin Detail |
| - () | 1267246..1267319 | - | 74 | NuclAT_3 | - | Antitoxin Detail |
| FQN08_RS06040 () | 1268146..1268361 | - | 216 | WP_021360433.1 | helix-turn-helix transcriptional regulator | - |
| FQN08_RS19245 () | 1269532..1269687 | + | 156 | WP_021360434.1 | hypothetical protein | - |
| FQN08_RS06045 () | 1269706..1270062 | - | 357 | WP_021360435.1 | helix-turn-helix domain-containing protein | - |
| FQN08_RS06050 () | 1270225..1270410 | + | 186 | WP_021360436.1 | hypothetical protein | - |
| FQN08_RS06055 () | 1270530..1271270 | + | 741 | WP_021360437.1 | Bro-N domain-containing protein | - |
| FQN08_RS06060 () | 1271666..1271920 | + | 255 | WP_095889687.1 | hypothetical protein | - |
| FQN08_RS06065 () | 1271956..1272207 | + | 252 | WP_021361415.1 | hypothetical protein | - |
| FQN08_RS19250 () | 1272322..1272483 | + | 162 | WP_009894508.1 | hypothetical protein | - |
| FQN08_RS19255 () | 1272528..1272701 | + | 174 | WP_021360440.1 | hypothetical protein | - |
| FQN08_RS06075 () | 1272792..1273970 | + | 1179 | WP_077701539.1 | helicase SNF2 | - |
| FQN08_RS06080 () | 1273974..1274276 | + | 303 | WP_021360442.1 | VRR-NUC domain-containing protein | - |
| FQN08_RS06085 () | 1274277..1275962 | + | 1686 | WP_021424237.1 | AAA family ATPase | - |
| FQN08_RS06090 () | 1276026..1276469 | + | 444 | WP_021360444.1 | DUF669 domain-containing protein | - |
| FQN08_RS06095 () | 1276683..1278416 | + | 1734 | WP_021360446.1 | DNA polymerase B family protein | - |
| FQN08_RS06100 () | 1278428..1280311 | + | 1884 | WP_021360447.1 | DNA primase family protein | - |
| FQN08_RS06105 () | 1280655..1281083 | + | 429 | WP_021360448.1 | sigma-70 family RNA polymerase sigma factor | - |
| FQN08_RS06110 () | 1281256..1281459 | + | 204 | WP_021360449.1 | hypothetical protein | - |
| FQN08_RS06115 () | 1281494..1281740 | + | 247 | Protein_1093 | hypothetical protein | - |
| FQN08_RS06120 () | 1281947..1282165 | + | 219 | WP_021360451.1 | hypothetical protein | - |
| FQN08_RS06125 () | 1282610..1283176 | + | 567 | WP_021360452.1 | hypothetical protein | - |
| FQN08_RS06130 () | 1283236..1283925 | + | 690 | WP_021424238.1 | helix-turn-helix domain-containing protein | - |
| FQN08_RS06135 () | 1283903..1285171 | + | 1269 | WP_165483642.1 | PBSX family phage terminase large subunit | - |
| FQN08_RS06140 () | 1285176..1286579 | + | 1404 | WP_021360968.1 | phage portal protein | - |
| FQN08_RS06145 () | 1286569..1287930 | + | 1362 | WP_021417352.1 | minor capsid protein | - |
| FQN08_RS06150 () | 1287933..1288094 | + | 162 | WP_021360965.1 | cysteine-rich CPCC family protein | - |
| FQN08_RS06155 () | 1288166..1288360 | + | 195 | WP_021360964.1 | hypothetical protein | - |
| FQN08_RS06160 () | 1288405..1288977 | + | 573 | WP_021360963.1 | phage scaffolding protein | - |
| FQN08_RS06165 () | 1288993..1289373 | + | 381 | WP_021360962.1 | hypothetical protein | - |
| FQN08_RS06170 () | 1289385..1290404 | + | 1020 | WP_018112729.1 | major capsid protein | - |
| FQN08_RS06175 () | 1290415..1290759 | + | 345 | WP_021360961.1 | phage head-tail connector protein | - |
| FQN08_RS06180 () | 1290759..1291106 | + | 348 | WP_021360960.1 | hypothetical protein | - |
| FQN08_RS06185 () | 1291106..1291531 | + | 426 | WP_021361515.1 | HK97 gp10 family phage protein | - |
| FQN08_RS06190 () | 1291524..1291961 | + | 438 | WP_009896628.1 | hypothetical protein | - |
| FQN08_RS06195 () | 1291954..1292130 | + | 177 | WP_009896630.1 | hypothetical protein | - |
| FQN08_RS06200 () | 1292131..1293441 | + | 1311 | WP_021360348.1 | phage tail sheath family protein | - |
| FQN08_RS06205 () | 1293463..1293939 | + | 477 | WP_043897090.1 | phage tail tube protein | - |
| FQN08_RS06210 () | 1293993..1294250 | + | 258 | WP_021360350.1 | hypothetical protein | - |
| FQN08_RS06215 () | 1294252..1294692 | + | 441 | WP_009894229.1 | phage portal protein | - |
| FQN08_RS19370 () | 1294692..1294886 | + | 195 | WP_074048437.1 | hypothetical protein | - |
| FQN08_RS06225 () | 1294954..1295745 | + | 792 | WP_021360351.1 | SHOCT domain-containing protein | - |
| FQN08_RS06230 () | 1295812..1298154 | + | 2343 | WP_021361514.1 | tape measure protein | - |
| FQN08_RS06235 () | 1298170..1298859 | + | 690 | WP_021361513.1 | LysM peptidoglycan-binding domain-containing protein | - |
| FQN08_RS06240 () | 1298852..1300744 | + | 1893 | WP_021417351.1 | Gamma-D-glutamyl-L-lysine dipeptidyl-peptidase | VF |
| FQN08_RS06245 () | 1300758..1301018 | + | 261 | WP_009896657.1 | DUF2577 domain-containing protein | - |
| FQN08_RS06250 () | 1301023..1301442 | + | 420 | WP_009896659.1 | DUF2634 domain-containing protein | - |
| FQN08_RS06255 () | 1301443..1302492 | + | 1050 | WP_032516650.1 | baseplate J/gp47 family protein | - |
| FQN08_RS06260 () | 1302485..1303102 | + | 618 | WP_021361396.1 | YmfQ family protein | - |
| FQN08_RS06265 () | 1303118..1304122 | + | 1005 | WP_021427194.1 | phage tail protein | - |
| FQN08_RS06270 () | 1304139..1305680 | + | 1542 | WP_021360356.1 | hypothetical protein | - |
| FQN08_RS06275 () | 1305694..1305987 | + | 294 | WP_021360357.1 | hypothetical protein | - |
| FQN08_RS06280 () | 1305987..1306169 | + | 183 | WP_021361398.1 | hypothetical protein | - |
| FQN08_RS06285 () | 1306204..1306419 | + | 216 | WP_021360359.1 | hypothetical protein | - |
| FQN08_RS06290 () | 1306432..1307472 | + | 1041 | WP_021361399.1 | hypothetical protein | - |
| FQN08_RS06295 () | 1307473..1307796 | + | 324 | WP_021360361.1 | hypothetical protein | - |
| FQN08_RS06300 () | 1307798..1307935 | + | 138 | WP_021361401.1 | XkdX family protein | - |
| FQN08_RS06305 () | 1307967..1308197 | + | 231 | WP_009898415.1 | hemolysin XhlA family protein | - |
| FQN08_RS06310 () | 1308217..1308474 | + | 258 | WP_009898413.1 | phage holin family protein | - |
| FQN08_RS06315 () | 1308474..1309304 | + | 831 | WP_021360454.1 | N-acetylmuramoyl-L-alanine amidase | - |
| FQN08_RS06320 () | 1309450..1309833 | - | 384 | WP_021360455.1 | hypothetical protein | - |
| FQN08_RS06325 () | 1309981..1310310 | + | 330 | Protein_1135 | hypothetical protein | - |
| FQN08_RS06330 () | 1310509..1310724 | + | 216 | WP_025989185.1 | hypothetical protein | - |
| FQN08_RS06335 () | 1311033..1311422 | + | 390 | WP_021360457.1 | BlaI/MecI/CopY family transcriptional regulator | - |
| FQN08_RS06340 () | 1311746..1312255 | + | 510 | WP_003433368.1 | glycopeptide resistance protein VanZ1 | - |
| FQN08_RS06345 () | 1312357..1312551 | - | 195 | WP_003419284.1 | hypothetical protein | - |
| FQN08_RS06350 () | 1313067..1313459 | - | 393 | WP_003438191.1 | RNA polymerase sigma-28 factor | VF |
| FQN08_RS06360 () | 1314026..1314388 | + | 363 | WP_032510294.1 | hypothetical protein | - |
| FQN08_RS06365 () | 1314372..1315082 | + | 711 | WP_021360459.1 | hypothetical protein | - |
| FQN08_RS06370 () | 1315102..1315521 | + | 420 | WP_009902379.1 | hypothetical protein | - |
| FQN08_RS06375 () | 1315511..1316035 | + | 525 | WP_021359093.1 | hypothetical protein | - |
| FQN08_RS06380 () | 1316347..1316904 | + | 558 | WP_009889023.1 | elongation factor P | - |
| FQN08_RS06385 () | 1316996..1317451 | + | 456 | WP_003428343.1 | hypothetical protein | - |
| FQN08_RS06390 () | 1317614..1318324 | + | 711 | WP_003428341.1 | ribonuclease III | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|