MGE detailed information
MGE type: Prophage MGE length: 23067 bp
Accession: NZ_CP042220 Location: 3913458..3936524 Organism: Dickeya poaceiphila strain NCPPB 569 Replicon: chromosome
Accession: NZ_CP042220 Location: 3913458..3936524 Organism: Dickeya poaceiphila strain NCPPB 569 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Dpoa569_RS17540 () | 3908686..3909342 | + | 657 | WP_042868191.1 | DUF2807 domain-containing protein | - |
| Dpoa569_RS17545 () | 3909569..3910978 | - | 1410 | WP_042868189.1 | sigma-54 dependent transcriptional regulator | - |
| Dpoa569_RS17550 () | 3911027..3913456 | - | 2430 | WP_042868188.1 | ABC transporter permease | - |
| Dpoa569_RS17555 () | 3913458..3914174 | - | 717 | WP_042868187.1 | putative ABC transporter ATP-binding protein YknY | VF |
| Dpoa569_RS17560 () | 3914228..3915478 | - | 1251 | WP_042868186.1 | HlyD family efflux transporter periplasmic adaptor subunit | - |
| Dpoa569_RS17565 () | 3915908..3916453 | + | 546 | WP_042868185.1 | AraC family transcriptional regulator | - |
| Dpoa569_RS17570 () | 3916465..3916710 | - | 246 | Protein_3418 | HipA domain-containing protein | - |
| Dpoa569_RS17575 () | 3916783..3917196 | - | 414 | Protein_3419 | Prophage integrase IntA ; Integrase | Integrase |
| Dpoa569_RS17580 () | 3917733..3918005 | + | 273 | WP_019843650.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| Dpoa569_RS17585 () | 3917996..3918475 | + | 480 | WP_042868180.1 | GNAT family N-acetyltransferase | Toxin Detail |
| Dpoa569_RS17590 () | 3918663..3919865 | - | 1203 | WP_146410909.1 | IS256 family transposase ISSod4 | Transposase |
| Dpoa569_RS17595 () | 3920130..3921062 | - | 933 | WP_042868178.1 | HrgA protein | - |
| Dpoa569_RS17600 () | 3921294..3921515 | - | 222 | Protein_3424 | integrase | - |
| Dpoa569_RS17610 () | 3922763..3923618 | - | 856 | Protein_3426 | Prophage integrase IntA ; Integrase | Integrase |
| Dpoa569_RS17615 () | 3923978..3926245 | - | 2268 | WP_042868171.1 | S8 family serine peptidase | - |
| Dpoa569_RS17620 () | 3926251..3927357 | - | 1107 | WP_042868169.1 | ATP-binding protein | - |
| Dpoa569_RS17625 () | 3927968..3928291 | - | 324 | WP_042868167.1 | DNA-binding transcriptional regulator | - |
| Dpoa569_RS17630 () | 3928275..3928633 | - | 359 | Protein_3430 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| Dpoa569_RS17635 () | 3929673..3930554 | + | 882 | WP_042868165.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| Dpoa569_RS17640 () | 3930557..3930757 | + | 201 | WP_042873725.1 | AlpA family transcriptional regulator | - |
| Dpoa569_RS17645 () | 3930754..3931290 | + | 537 | WP_042868163.1 | ash family protein | - |
| Dpoa569_RS17650 () | 3931283..3933328 | + | 2046 | WP_042868161.1 | AAA family ATPase | - |
| Dpoa569_RS17655 () | 3933552..3933818 | - | 267 | WP_015848023.1 | helix-turn-helix domain-containing protein | - |
| Dpoa569_RS17660 () | 3933914..3934129 | + | 216 | WP_050569371.1 | helix-turn-helix domain-containing protein | - |
| Dpoa569_RS17665 () | 3934239..3935222 | - | 984 | WP_042868157.1 | hypothetical protein | - |
| Dpoa569_RS17670 () | 3935268..3936524 | - | 1257 | WP_042868155.1 | Prophage integrase IntA ; Integrase | Integrase |
| Dpoa569_RS17680 () | 3937047..3938117 | - | 1071 | WP_042868153.1 | LPS export ABC transporter permease LptG | - |
| Dpoa569_RS17685 () | 3938119..3939219 | - | 1101 | WP_146411615.1 | LPS export ABC transporter permease LptF | - |
| Dpoa569_RS17690 () | 3939502..3941010 | + | 1509 | WP_042868149.1 | leucyl aminopeptidase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|