MGE detailed information
MGE type: Genomic_island MGE length: 38358 bp
Accession: NZ_CP042220 Location: 3525209..3563566 Organism: Dickeya poaceiphila strain NCPPB 569 Replicon: chromosome
Accession: NZ_CP042220 Location: 3525209..3563566 Organism: Dickeya poaceiphila strain NCPPB 569 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Dpoa569_RS15755 () | 3521425..3521769 | + | 345 | WP_042868752.1 | outer membrane protein assembly factor BamE | - |
| Dpoa569_RS15760 () | 3521827..3522120 | - | 294 | WP_042868750.1 | RnfH family protein | - |
| Dpoa569_RS15765 () | 3522113..3522547 | - | 435 | WP_042868748.1 | type II toxin-antitoxin system RatA family toxin | - |
| Dpoa569_RS15770 () | 3522703..3523185 | + | 483 | WP_016942314.1 | SsrA-binding protein SmpB | - |
| Dpoa569_RS15780 () | 3523765..3524994 | + | 1230 | WP_042873785.1 | tyrosine-type recombinase/integrase | - |
| Dpoa569_RS15785 () | 3525209..3526408 | + | 1200 | WP_042868746.1 | hypothetical protein | - |
| Dpoa569_RS15790 () | 3526405..3526851 | + | 447 | WP_000708540.1 | hypothetical protein | - |
| Dpoa569_RS15795 () | 3526851..3528671 | + | 1821 | WP_042868744.1 | DUF3732 domain-containing protein | - |
| Dpoa569_RS19460 () | 3530462..3530779 | - | 318 | Protein_3074 | IS256 family transposase IS285 | Transposase |
| Dpoa569_RS15810 () | 3530925..3531077 | - | 153 | WP_155683842.1 | hypothetical protein | - |
| Dpoa569_RS15815 () | 3531101..3531517 | - | 417 | WP_042870892.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| Dpoa569_RS15820 () | 3531514..3531744 | - | 231 | WP_042870894.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| Dpoa569_RS15825 () | 3532095..3534738 | + | 2644 | Protein_3078 | ankyrin repeat domain-containing protein | - |
| Dpoa569_RS15830 () | 3534838..3535461 | - | 624 | WP_042870895.1 | glutathione S-transferase family protein | - |
| Dpoa569_RS15835 () | 3535573..3536787 | - | 1215 | WP_042873937.1 | MFS transporter | - |
| Dpoa569_RS15840 () | 3537405..3537866 | + | 462 | WP_042870896.1 | MEKHLA domain-containing protein | - |
| Dpoa569_RS15845 () | 3538081..3538809 | + | 729 | WP_042870898.1 | IS607 family transposase ISAfe11 | Transposase |
| Dpoa569_RS15850 () | 3539443..3539841 | + | 399 | WP_042870900.1 | type II secretion system pilot lipoprotein GspS | - |
| Dpoa569_RS15855 () | 3540028..3540798 | + | 771 | WP_128569728.1 | hypothetical protein | - |
| Dpoa569_RS15860 () | 3541374..3541976 | + | 603 | WP_146411534.1 | hypothetical protein | - |
| Dpoa569_RS15865 () | 3542831..3543592 | + | 762 | WP_146411537.1 | hypothetical protein | - |
| Dpoa569_RS15870 () | 3544143..3544919 | + | 777 | WP_128569675.1 | hypothetical protein | - |
| Dpoa569_RS15875 () | 3545221..3545694 | - | 474 | WP_042868736.1 | type II secretion system protein M | - |
| Dpoa569_RS15880 () | 3545691..3546878 | - | 1188 | WP_128569674.1 | general secretion pathway protein GspL | - |
| Dpoa569_RS15885 () | 3546868..3547863 | - | 996 | WP_042868733.1 | general secretion pathway protein GspK | - |
| Dpoa569_RS15890 () | 3547860..3548405 | - | 546 | WP_042868731.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | - |
| Dpoa569_RS15895 () | 3548402..3548770 | - | 369 | WP_042868729.1 | Type II secretion system protein I | VF |
| Dpoa569_RS15900 () | 3548805..3549230 | - | 426 | WP_042868727.1 | Type II secretion system protein G | VF |
| Dpoa569_RS15905 () | 3549250..3550455 | - | 1206 | WP_042873784.1 | Type II secretion system protein F | VF |
| Dpoa569_RS15910 () | 3550448..3551926 | - | 1479 | WP_050569393.1 | Type II secretion system protein E | VF |
| Dpoa569_RS15915 () | 3551926..3554028 | - | 2103 | WP_042868723.1 | Putative type II secretion system protein D | VF |
| Dpoa569_RS15920 () | 3554044..3554547 | - | 504 | WP_042868721.1 | hypothetical protein | - |
| Dpoa569_RS15925 () | 3555231..3555665 | + | 435 | WP_042868719.1 | nuclear transport factor 2 family protein | - |
| Dpoa569_RS15930 () | 3555662..3556381 | + | 720 | WP_042868717.1 | Serine 3-dehydrogenase | VF |
| Dpoa569_RS15935 () | 3556378..3557643 | + | 1266 | WP_042868716.1 | FAD-dependent oxidoreductase | - |
| Dpoa569_RS15940 () | 3557636..3558358 | + | 723 | WP_042868714.1 | DUF1365 domain-containing protein | - |
| Dpoa569_RS15945 () | 3558355..3559575 | + | 1221 | WP_042868712.1 | cyclopropane-fatty-acyl-phospholipid synthase family protein | - |
| Dpoa569_RS15950 () | 3559682..3560215 | + | 534 | WP_042868710.1 | DUF3833 domain-containing protein | - |
| Dpoa569_RS15955 () | 3560212..3561171 | + | 960 | WP_042868708.1 | DUF523 and DUF1722 domain-containing protein | - |
| Dpoa569_RS15960 () | 3561316..3561951 | + | 636 | WP_042868707.1 | carbonic anhydrase | - |
| Dpoa569_RS15965 () | 3562784..3563566 | + | 783 | WP_042868705.1 | transporter substrate-binding domain-containing protein | - |
| Dpoa569_RS15970 () | 3563779..3564711 | - | 933 | WP_042868703.1 | nucleoside recognition family protein | - |
| Dpoa569_RS15975 () | 3564974..3566119 | + | 1146 | WP_146411540.1 | lytic murein transglycosylase B | - |
| Dpoa569_RS15980 () | 3566605..3567705 | + | 1101 | WP_146411543.1 | D-alanine--D-alanine ligase | - |
| Dpoa569_RS15985 () | 3567751..3568035 | - | 285 | WP_042868701.1 | hypothetical protein | - |
| Dpoa569_RS15990 () | 3567995..3568444 | - | 450 | WP_050569392.1 | VOC family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|