MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 25886 bp
Accession: NZ_CP042220 Location: 1433215..1459100 Organism: Dickeya poaceiphila strain NCPPB 569 Replicon: chromosome
Accession: NZ_CP042220 Location: 1433215..1459100 Organism: Dickeya poaceiphila strain NCPPB 569 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Dpoa569_RS06085 () | 1431214..1431525 | + | 312 | WP_042871640.1 | DUF736 domain-containing protein | - |
| Dpoa569_RS06090 () | 1431771..1433054 | - | 1284 | WP_146411159.1 | tyrosine-type recombinase/integrase | - |
| Dpoa569_RS06095 () | 1433789..1434358 | - | 570 | WP_050569479.1 | hypothetical protein | - |
| Dpoa569_RS06100 () | 1434362..1434808 | - | 447 | WP_042871639.1 | hypothetical protein | - |
| Dpoa569_RS06105 () | 1435122..1435997 | + | 876 | WP_042871637.1 | hypothetical protein | - |
| Dpoa569_RS06110 () | 1436149..1436367 | + | 219 | WP_040033115.1 | AlpA family transcriptional regulator | - |
| Dpoa569_RS06115 () | 1436388..1436720 | + | 333 | WP_042871633.1 | hypothetical protein | - |
| Dpoa569_RS06120 () | 1436796..1437086 | + | 291 | WP_042871631.1 | hypothetical protein | - |
| Dpoa569_RS06125 () | 1437143..1437508 | + | 366 | WP_042871627.1 | hypothetical protein | - |
| Dpoa569_RS06130 () | 1437572..1437814 | + | 243 | WP_042871625.1 | DNA-binding protein | - |
| Dpoa569_RS06135 () | 1437951..1438439 | - | 489 | WP_042871623.1 | DUF4756 family protein | - |
| Dpoa569_RS06140 () | 1438623..1439423 | - | 801 | WP_042871621.1 | hypothetical protein | - |
| Dpoa569_RS06145 () | 1439451..1440185 | - | 735 | WP_042871619.1 | hypothetical protein | - |
| Dpoa569_RS06150 () | 1441626..1442003 | - | 378 | WP_042874001.1 | hypothetical protein | - |
| Dpoa569_RS06155 () | 1442674..1443228 | + | 555 | WP_042874000.1 | membrane lipoprotein lipid attachment site-containing protein | - |
| Dpoa569_RS06160 () | 1443246..1443902 | + | 657 | WP_042871616.1 | hypothetical protein | - |
| Dpoa569_RS06165 () | 1443949..1444422 | - | 474 | WP_164837105.1 | GIY-YIG nuclease family protein | - |
| Dpoa569_RS06170 () | 1444531..1445952 | - | 1422 | WP_042873998.1 | MobA/MobL family protein | - |
| Dpoa569_RS06175 () | 1446729..1448756 | - | 2028 | WP_042871614.1 | hypothetical protein | - |
| Dpoa569_RS06180 () | 1448753..1449217 | - | 465 | WP_042871611.1 | hypothetical protein | - |
| Dpoa569_RS06185 () | 1449220..1450119 | - | 900 | WP_042871609.1 | hypothetical protein | - |
| Dpoa569_RS06190 () | 1450276..1450605 | - | 330 | WP_042871606.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| Dpoa569_RS06195 () | 1450607..1450963 | - | 357 | WP_042871602.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| Dpoa569_RS06200 () | 1451295..1451552 | + | 258 | WP_042871601.1 | hypothetical protein | - |
| Dpoa569_RS06205 () | 1451549..1451833 | + | 285 | WP_146411163.1 | conjugal transfer protein TraD | - |
| Dpoa569_RS06210 () | 1452046..1452300 | - | 255 | WP_042871598.1 | MafI family immunity protein | - |
| Dpoa569_RS06215 () | 1452427..1452828 | - | 402 | WP_026357825.1 | H-NS histone family protein | - |
| Dpoa569_RS06220 () | 1453011..1454615 | + | 1605 | WP_050569476.1 | hypothetical protein | VF |
| Dpoa569_RS06225 () | 1454707..1454901 | - | 195 | WP_042871592.1 | hypothetical protein | - |
| Dpoa569_RS06230 () | 1455201..1455635 | - | 435 | WP_128569753.1 | hypothetical protein | - |
| Dpoa569_RS19420 () | 1455966..1456394 | + | 429 | WP_042871590.1 | hypothetical protein | - |
| Dpoa569_RS06240 () | 1456992..1457372 | + | 381 | WP_128569829.1 | hypothetical protein | - |
| Dpoa569_RS06245 () | 1457620..1458897 | - | 1278 | WP_042871588.1 | Prophage integrase IntA ; Integrase | Integrase |
| Dpoa569_RS06255 () | 1459533..1459796 | + | 264 | Protein_1204 | LysR family transcriptional regulator | - |
| Dpoa569_RS06260 () | 1459891..1461300 | - | 1410 | WP_042871585.1 | D-serine/D-alanine/glycine transporter | - |
| Dpoa569_RS06270 () | 1461715..1462878 | - | 1164 | WP_042871584.1 | site-specific integrase | - |
| Dpoa569_RS06280 () | 1463111..1463359 | - | 249 | WP_128569752.1 | hypothetical protein | - |
| Dpoa569_RS06285 () | 1463441..1463743 | - | 303 | WP_050569552.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|