MGE detailed information
MGE type: Conjugative plasmid MGE length: 116559 bp
Accession: NZ_CP042181 Location: 1..116559 Organism: Pseudomonas sp. KBS0802 Replicon: plasmid unnamed
Accession: NZ_CP042181 Location: 1..116559 Organism: Pseudomonas sp. KBS0802 Replicon: plasmid unnamed
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FFH79_RS29200 () | 584..877 | + | 294 | WP_011005849.1 | hypothetical protein | - |
| FFH79_RS29205 () | 867..1376 | + | 510 | WP_011005850.1 | hypothetical protein | - |
| FFH79_RS29210 () | 1550..2824 | + | 1275 | WP_011005851.1 | DUF1173 family protein | - |
| FFH79_RS29215 () | 3011..3580 | + | 570 | WP_090315701.1 | hypothetical protein | - |
| FFH79_RS29220 () | 3597..4883 | - | 1287 | WP_090315698.1 | Y-family DNA polymerase | - |
| FFH79_RS29225 () | 4873..5304 | - | 432 | WP_011005854.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| FFH79_RS29230 () | 5442..6392 | + | 951 | WP_011005855.1 | non-homologous end-joining DNA ligase | - |
| FFH79_RS29235 () | 6423..6698 | + | 276 | WP_011005856.1 | hypothetical protein | - |
| FFH79_RS29240 () | 8067..8291 | - | 225 | WP_011005860.1 | hypothetical protein | - |
| FFH79_RS29245 () | 8332..8634 | - | 303 | WP_011005861.1 | putative addiction module antidote protein | Antitoxin Detail |
| FFH79_RS29250 () | 8631..8933 | - | 303 | WP_011005862.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| FFH79_RS29255 () | 9135..9914 | + | 780 | WP_011005863.1 | DUF4942 domain-containing protein | - |
| FFH79_RS29260 () | 10068..10436 | + | 369 | WP_011005864.1 | hypothetical protein | - |
| FFH79_RS29265 () | 10469..10786 | + | 318 | WP_062378618.1 | hypothetical protein | - |
| FFH79_RS29270 () | 10842..11060 | + | 219 | WP_011005866.1 | hypothetical protein | - |
| FFH79_RS29275 () | 11199..12218 | + | 1020 | WP_062378625.1 | hypothetical protein | - |
| FFH79_RS29280 () | 12361..12603 | + | 243 | WP_011005868.1 | hypothetical protein | - |
| FFH79_RS29285 () | 12655..14337 | + | 1683 | WP_011005869.1 | DNA cytosine methyltransferase | - |
| FFH79_RS29290 () | 14428..14649 | + | 222 | WP_011005870.1 | hypothetical protein | - |
| FFH79_RS29295 () | 14653..15093 | + | 441 | WP_011005871.1 | hypothetical protein | - |
| FFH79_RS29300 () | 15190..15489 | + | 300 | WP_062378629.1 | hypothetical protein | - |
| FFH79_RS29305 () | 16160..16552 | + | 393 | WP_011005874.1 | regulatory protein RecX | - |
| FFH79_RS29310 () | 16577..17119 | + | 543 | WP_011005875.1 | single-stranded DNA-binding protein | - |
| FFH79_RS29315 () | 17140..17322 | + | 183 | WP_062378630.1 | hypothetical protein | - |
| FFH79_RS29320 () | 17560..18387 | + | 828 | WP_011005876.1 | DUF945 domain-containing protein | - |
| FFH79_RS29325 () | 18448..18879 | + | 432 | WP_011005877.1 | hypothetical protein | - |
| FFH79_RS29330 () | 18896..19210 | + | 315 | WP_011005878.1 | transcriptional regulator | - |
| FFH79_RS29335 () | 19229..19663 | + | 435 | WP_011005879.1 | hypothetical protein | - |
| FFH79_RS29340 () | 20367..21047 | + | 681 | WP_004574802.1 | cupin domain-containing protein | - |
| FFH79_RS29345 () | 21044..21628 | + | 585 | WP_004574803.1 | Biofilm operon icaADBC HTH-type negative transcriptional regulator IcaR | VF |
| FFH79_RS29350 () | 21688..22464 | + | 777 | WP_004574804.1 | 3-alpha-hydroxycholanate dehydrogenase (NADP(+)) | VF |
| FFH79_RS29355 () | 22479..23045 | + | 567 | WP_004574805.1 | OsmC family protein | - |
| FFH79_RS29365 () | 23333..23710 | + | 378 | Protein_32 | helix-turn-helix domain-containing protein | - |
| FFH79_RS29370 () | 23970..24233 | - | 264 | Protein_33 | HTH-type transcriptional regulator TdfR | VF |
| FFH79_RS29375 () | 24378..25040 | - | 663 | WP_011005883.1 | Tn3 family transposase TnpR_ISMex22 | Transposase |
| FFH79_RS29380 () | 25126..25563 | + | 438 | WP_011005884.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| FFH79_RS29390 () | 26590..27069 | - | 480 | WP_010953884.1 | hypothetical protein | - |
| FFH79_RS29395 () | 27050..27694 | - | 645 | WP_011005888.1 | hypothetical protein | - |
| FFH79_RS29400 () | 27734..28732 | - | 999 | WP_010953882.1 | Tn3 family transposase tnpT_TnXax1 | Transposase |
| FFH79_RS29405 () | 28913..29884 | + | 972 | WP_010953881.1 | Tn3 family transposase TnpR_TnXo19 | Transposase |
| FFH79_RS29410 () | 30091..30321 | + | 231 | Protein_40 | MFS transporter | - |
| FFH79_RS29415 () | 30331..30759 | + | 429 | WP_010953879.1 | DUF1232 domain-containing protein | - |
| FFH79_RS29420 () | 30665..31235 | - | 571 | Protein_42 | ATP-dependent zinc protease | - |
| FFH79_RS29430 () | 32541..32902 | - | 362 | Protein_44 | IS3 family transposase ISAs22 | Transposase |
| FFH79_RS29435 () | 32968..34620 | - | 1653 | WP_010953874.1 | alkaline phosphatase family protein | - |
| FFH79_RS29440 () | 34655..35041 | - | 387 | WP_031297681.1 | diacylglycerol kinase | - |
| FFH79_RS29445 () | 35182..36219 | + | 1038 | WP_023082810.1 | IS5 family transposase ISAzo41 | Transposase |
| FFH79_RS29450 () | 36380..37200 | - | 821 | Protein_48 | ISL3 family transposase ISPa61 | Transposase |
| FFH79_RS29455 () | 37414..37647 | - | 234 | Protein_49 | IS1182 family transposase ISPpu16 | Transposase |
| FFH79_RS29460 () | 37711..38861 | + | 1151 | WP_134637449.1 | IS3 family transposase ISPsy29 | Transposase |
| FFH79_RS29465 () | 39099..39491 | + | 393 | WP_011005898.1 | hypothetical protein | - |
| FFH79_RS29475 () | 39709..41409 | - | 1701 | WP_095159416.1 | Phenol regulator MopR | VF |
| FFH79_RS29480 () | 41856..42821 | + | 966 | WP_011005901.1 | XylDLEGF operon transcriptional activator XylS | - |
| FFH79_RS29485 () | 43008..43199 | - | 192 | WP_011005902.1 | 2-hydroxymuconate tautomerase | - |
| FFH79_RS29490 () | 43248..44042 | - | 795 | WP_095159415.1 | 2-oxo-3-hexenedioate decarboxylase | - |
| FFH79_RS29495 () | 44039..45076 | - | 1038 | WP_011005904.1 | 4-hydroxy-2-oxovalerate aldolase | - |
| FFH79_RS29500 () | 45087..46025 | - | 939 | WP_095159414.1 | acetaldehyde dehydrogenase (acetylating) | - |
| FFH79_RS29505 () | 46040..46825 | - | 786 | WP_045633702.1 | 2-oxopent-4-enoate hydratase | - |
| FFH79_RS29510 () | 46837..47685 | - | 849 | WP_045633701.1 | alpha/beta fold hydrolase | - |
| FFH79_RS29515 () | 47696..49156 | - | 1461 | WP_064481766.1 | 2-hydroxymuconic semialdehyde dehydrogenase | - |
| FFH79_RS29520 () | 49191..50114 | - | 924 | WP_011005909.1 | catechol 2,3-dioxygenase | - |
| FFH79_RS29525 () | 50111..50449 | - | 339 | WP_052258346.1 | 2Fe-2S iron-sulfur cluster binding domain-containing protein | - |
| FFH79_RS29530 () | 50594..51370 | - | 777 | WP_045633697.1 | Levodione reductase | VF |
| FFH79_RS29535 () | 51485..52495 | - | 1011 | WP_138868024.1 | ring-hydroxylating dioxygenase ferredoxin reductase family protein | - |
| FFH79_RS29540 () | 52505..52993 | - | 489 | WP_011005913.1 | benzoate 1,2-dioxygenase small subunit | - |
| FFH79_RS29545 () | 52994..54349 | - | 1356 | WP_138868026.1 | benzoate 1,2-dioxygenase large subunit | - |
| FFH79_RS29550 () | 54530..55279 | - | 750 | WP_134637673.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| FFH79_RS29555 () | 55276..57432 | - | 2157 | WP_011005916.1 | type IV conjugative transfer system coupling protein TraD | - |
| FFH79_RS29560 () | 57441..57978 | - | 538 | Protein_69 | integrating conjugative element protein | - |
| FFH79_RS29565 () | 58287..59423 | - | 1137 | Protein_70 | hypothetical protein | VF |
| FFH79_RS29570 () | 59420..60328 | - | 909 | WP_011005918.1 | TIGR03749 family integrating conjugative element protein | - |
| FFH79_RS29575 () | 60325..61017 | - | 693 | WP_095159412.1 | TIGR03746 family integrating conjugative element protein | - |
| FFH79_RS29580 () | 61014..61424 | - | 411 | WP_045633950.1 | TIGR03750 family conjugal transfer protein | - |
| FFH79_RS29585 () | 61437..61805 | - | 369 | WP_011005920.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| FFH79_RS29590 () | 61828..62067 | - | 240 | WP_011005921.1 | TIGR03758 family integrating conjugative element protein | - |
| FFH79_RS29595 () | 62064..62435 | - | 372 | WP_011005922.1 | RAQPRD family integrative conjugative element protein | - |
| FFH79_RS30180 () | 62899..63234 | + | 336 | WP_081262894.1 | transposase | - |
| FFH79_RS29605 () | 63441..63548 | - | 108 | Protein_78 | IS5/IS1182 family transposase | - |
| FFH79_RS29610 () | 63667..64410 | - | 744 | Protein_79 | IS1380 family transposase ISPsp9 | Transposase |
| FFH79_RS29615 () | 64664..65017 | - | 354 | WP_011005926.1 | hypothetical protein | - |
| FFH79_RS29620 () | 65422..66819 | - | 1398 | WP_095159411.1 | outer membrane protein transport protein | - |
| FFH79_RS29625 () | 66932..68032 | - | 1101 | WP_011005928.1 | NAD(P)-dependent alcohol dehydrogenase | - |
| FFH79_RS29630 () | 68228..69052 | - | 825 | WP_138868027.1 | ferredoxin--NAD(+) reductase | - |
| FFH79_RS30185 () | 68990..69280 | - | 291 | Protein_84 | 2Fe-2S iron-sulfur cluster binding domain-containing protein | - |
| FFH79_RS29635 () | 69430..70539 | - | 1110 | WP_011005930.1 | xylene monooxygenase subunit XylM | - |
| FFH79_RS29640 () | 70567..72030 | - | 1464 | WP_011005931.1 | benzaldehyde dehydrogenase | - |
| FFH79_RS29645 () | 72062..73015 | - | 954 | WP_159985337.1 | alcohol dehydrogenase catalytic domain-containing protein | - |
| FFH79_RS29650 () | 73850..74126 | - | 277 | Protein_88 | transposase | - |
| FFH79_RS29655 () | 74201..75238 | + | 1038 | WP_023082810.1 | IS5 family transposase ISAzo41 | Transposase |
| FFH79_RS30120 () | 75247..75495 | + | 249 | WP_090315687.1 | hypothetical protein | - |
| FFH79_RS29665 () | 75530..75889 | - | 360 | WP_010953870.1 | hypothetical protein | - |
| FFH79_RS29670 () | 76008..76295 | + | 288 | WP_010953869.1 | metal-sensing transcriptional repressor MreA | - |
| FFH79_RS29675 () | 76306..77439 | + | 1134 | WP_010953868.1 | Ni(II)/Co(II) efflux transporter permease subunit MrdH | - |
| FFH79_RS29680 () | 77444..77854 | + | 411 | Protein_94 | DedA family protein | - |
| FFH79_RS29685 () | 78000..78362 | - | 363 | WP_010953865.1 | Tn4652, tnpA repressor protein TnpC | - |
| FFH79_RS29690 () | 78371..81376 | - | 3006 | WP_023082813.1 | Tn3 family transposase TnpA_ISPa42 | Transposase |
| FFH79_RS29695 () | 81592..82035 | + | 444 | WP_079281436.1 | hypothetical protein | - |
| FFH79_RS29700 () | 82088..82420 | + | 333 | WP_011005940.1 | multidrug efflux SMR transporter | - |
| FFH79_RS29710 () | 82705..83994 | - | 1290 | WP_004574636.1 | ISL3 family transposase ISPst9 | Transposase |
| FFH79_RS29715 () | 84016..84528 | - | 513 | WP_003821921.1 | Lipoprotein signal peptidase | VF |
| FFH79_RS29720 () | 84532..85428 | - | 897 | WP_004364974.1 | cation diffusion facilitator family transporter | - |
| FFH79_RS29725 () | 85524..85931 | + | 408 | WP_010794431.1 | Cd(II)/Pb(II)-responsive transcriptional regulator | - |
| FFH79_RS29730 () | 86019..86558 | - | 540 | Protein_103 | alkylmercury lyase | - |
| FFH79_RS29735 () | 86651..87085 | + | 435 | WP_011005943.1 | IS607 family transposase ISCfe1 | Transposase |
| FFH79_RS29745 () | 87350..87910 | + | 561 | WP_001161490.1 | Tn3 family transposase TnpR_TnAs1 | Transposase |
| FFH79_RS29750 () | 87914..90880 | + | 2967 | WP_011005944.1 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| FFH79_RS29755 () | 91246..91731 | - | 486 | WP_062378595.1 | hypothetical protein | - |
| FFH79_RS29760 () | 91898..92689 | - | 792 | WP_062378597.1 | SprT-like domain-containing protein | - |
| FFH79_RS29765 () | 92819..93211 | - | 393 | WP_011005948.1 | hypothetical protein | - |
| FFH79_RS29770 () | 93215..93934 | - | 720 | WP_011005949.1 | hypothetical protein | - |
| FFH79_RS29775 () | 93931..94386 | - | 456 | WP_011005950.1 | hypothetical protein | - |
| FFH79_RS29780 () | 94820..95203 | + | 384 | WP_011005951.1 | hypothetical protein | - |
| FFH79_RS29785 () | 95203..96753 | + | 1551 | WP_011005952.1 | type IV secretion system DNA-binding domain-containing protein | - |
| FFH79_RS29790 () | 96765..99701 | + | 2937 | WP_011005953.1 | Multifunctional conjugation protein TraI | Relaxase |
| FFH79_RS29795 () | 99815..100447 | - | 633 | WP_011005954.1 | hypothetical protein | - |
| FFH79_RS29800 () | 100461..101030 | - | 570 | WP_090315695.1 | Phospholipase D | VF |
| FFH79_RS29805 () | 101053..101388 | - | 336 | WP_011005956.1 | hypothetical protein | - |
| FFH79_RS29810 () | 101417..102334 | - | 918 | WP_062378601.1 | Type IV secretion system protein virB1 | VF |
| FFH79_RS29815 () | 102318..103349 | - | 1032 | WP_011005958.1 | Type IV secretion system protein VirB11 | VF |
| FFH79_RS29820 () | 103359..104624 | - | 1266 | WP_011005959.1 | Type IV secretion system protein virB10 | VF |
| FFH79_RS29825 () | 104627..105412 | - | 786 | WP_011005960.1 | Type IV secretion system protein virB9 | VF |
| FFH79_RS29830 () | 105438..106103 | - | 666 | WP_062378604.1 | type IV secretion system protein | - |
| FFH79_RS29835 () | 106103..106966 | - | 864 | WP_011005962.1 | type IV secretion system protein | - |
| FFH79_RS29840 () | 106954..107346 | - | 393 | WP_011005963.1 | hypothetical protein | - |
| FFH79_RS29845 () | 107339..107551 | - | 213 | WP_011005964.1 | hypothetical protein | - |
| FFH79_RS29850 () | 107580..108269 | - | 690 | WP_011005965.1 | mating pair formation protein | - |
| FFH79_RS29855 () | 108269..110953 | - | 2685 | WP_011005966.1 | Type IV secretion system protein virB4 | VF |
| FFH79_RS29860 () | 110940..111236 | - | 297 | WP_011005967.1 | VirB3 family type IV secretion system protein | - |
| FFH79_RS29865 () | 111245..111706 | - | 462 | WP_011005968.1 | TrbC/VirB2 family protein | - |
| FFH79_RS29870 () | 112712..113479 | + | 768 | WP_062378610.1 | Chromosome-partitioning ATPase Soj | VF |
| FFH79_RS29875 () | 113490..114434 | + | 945 | WP_011005971.1 | ParB/RepB/Spo0J family partition protein | - |
| FFH79_RS29880 () | 114431..114781 | + | 351 | WP_011005972.1 | KorA protein | - |
| FFH79_RS29885 () | 114778..115185 | + | 408 | WP_011005846.1 | hypothetical protein | - |
| FFH79_RS29890 () | 115468..116103 | + | 636 | WP_011005847.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|