MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 63672 bp
Accession: NZ_CP042003 Location: 834840..898511 Organism: Staphylococcus aureus strain B3-14B Replicon: chromosome
Accession: NZ_CP042003 Location: 834840..898511 Organism: Staphylococcus aureus strain B3-14B Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FP480_RS04005 () | 830116..830466 | + | 351 | WP_001024035.1 | membrane protein | - |
| FP480_RS04010 () | 830618..831088 | - | 471 | WP_000164421.1 | S-ribosylhomocysteine lyase | - |
| FP480_RS04015 () | 831397..832581 | + | 1185 | WP_001291508.1 | M20 family metallopeptidase | - |
| FP480_RS04020 () | 832581..833774 | + | 1194 | WP_000183714.1 | hypothetical protein | - |
| FP480_RS04025 () | 834173..834844 | + | 672 | WP_000120549.1 | DUF2750 domain-containing protein | - |
| FP480_RS04030 () | 834974..835777 | - | 804 | WP_000862732.1 | type II pantothenate kinase | - |
| FP480_RS04035 () | 836202..837062 | + | 861 | WP_001040736.1 | GNAT family N-acetyltransferase | - |
| FP480_RS04040 () | 837174..837704 | + | 531 | WP_000701483.1 | DNA-directed RNA polymerase subunit delta | - |
| FP480_RS04045 () | 838040..839650 | + | 1611 | WP_145411515.1 | CTP synthase | - |
| FP480_RS04050 () | 839759..840280 | - | 522 | WP_000036005.1 | DUF2529 domain-containing protein | - |
| FP480_RS04055 () | 840498..841358 | + | 861 | WP_001131841.1 | fructose-bisphosphate aldolase | - |
| FP480_RS04060 () | 841824..843083 | + | 1260 | WP_000046613.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| FP480_RS04065 () | 843172..843507 | + | 336 | WP_000451437.1 | helix-turn-helix transcriptional regulator | - |
| FP480_RS04070 () | 843745..845172 | + | 1428 | WP_001206109.1 | aldehyde dehydrogenase family protein | - |
| FP480_RS04075 () | 845419..846735 | + | 1317 | WP_001115100.1 | Transcription termination factor Rho | VF |
| FP480_RS04080 () | 846853..847107 | + | 255 | WP_000808968.1 | type B 50S ribosomal protein L31 | - |
| FP480_RS04090 () | 847454..848053 | + | 600 | WP_000273356.1 | thymidine kinase | - |
| FP480_RS04095 () | 848054..849130 | + | 1077 | WP_000467900.1 | peptide chain release factor 1 | - |
| FP480_RS04100 () | 849117..849953 | + | 837 | WP_000248730.1 | peptide chain release factor N(5)-glutamine methyltransferase | - |
| FP480_RS04105 () | 850037..851083 | + | 1047 | WP_000379903.1 | threonylcarbamoyl-AMP synthase | - |
| FP480_RS04110 () | 851080..851499 | + | 420 | WP_000697332.1 | low molecular weight protein arginine phosphatase | - |
| FP480_RS04115 () | 851606..852130 | + | 525 | WP_000654181.1 | TIGR01440 family protein | - |
| FP480_RS04120 () | 852157..853395 | + | 1239 | WP_000120490.1 | serine hydroxymethyltransferase | - |
| FP480_RS04125 () | 853423..854052 | + | 630 | WP_000048712.1 | uracil phosphoribosyltransferase | - |
| FP480_RS04130 () | 854076..855203 | + | 1128 | WP_000723408.1 | UDP-N-acetylglucosamine 2-epimerase | VF |
| FP480_RS04135 () | 855271..855723 | + | 453 | WP_001825751.1 | ATP synthase subunit I | - |
| FP480_RS04140 () | 855744..856472 | + | 729 | WP_000349655.1 | F0F1 ATP synthase subunit A | - |
| FP480_RS04145 () | 856515..856727 | + | 213 | WP_001048816.1 | F0F1 ATP synthase subunit C | - |
| FP480_RS04150 () | 856925..857446 | + | 522 | WP_000140679.1 | F0F1 ATP synthase subunit B | - |
| FP480_RS04155 () | 857446..857985 | + | 540 | WP_000241344.1 | F0F1 ATP synthase subunit delta | - |
| FP480_RS04160 () | 858007..859515 | + | 1509 | WP_000974881.1 | ATP synthase subunit alpha | VF |
| FP480_RS04165 () | 859546..860412 | + | 867 | WP_000157603.1 | F0F1 ATP synthase subunit gamma | - |
| FP480_RS04170 () | 860434..861846 | + | 1413 | WP_000511139.1 | ATP synthase subunit beta | VF |
| FP480_RS04175 () | 861866..862270 | + | 405 | WP_001094394.1 | F0F1 ATP synthase subunit epsilon | - |
| FP480_RS04185 () | 862923..863156 | + | 234 | WP_000384523.1 | DUF1146 family protein | - |
| FP480_RS04190 () | 863267..864532 | + | 1266 | WP_000358009.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| FP480_RS04195 () | 864566..865006 | + | 441 | WP_000447678.1 | 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ | VF |
| FP480_RS04200 () | 865063..865503 | - | 441 | WP_000846746.1 | YwpF-like family protein | - |
| FP480_RS04205 () | 865697..866092 | + | 396 | WP_000932694.1 | single-stranded DNA-binding protein | - |
| FP480_RS04210 () | 866481..867176 | + | 696 | WP_000751995.1 | lytic transglycosylase SceD | - |
| FP480_RS04215 () | 867563..868252 | + | 690 | WP_000396068.1 | thiaminase II | - |
| FP480_RS04220 () | 868245..869075 | + | 831 | WP_000594965.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| FP480_RS04225 () | 869059..869850 | + | 792 | WP_001108486.1 | hydroxyethylthiazole kinase | - |
| FP480_RS04230 () | 869852..870493 | + | 642 | WP_000483161.1 | thiamine phosphate synthase | - |
| FP480_RS04235 () | 870579..871451 | + | 873 | WP_000725800.1 | membrane protein insertase YidC | - |
| FP480_RS04240 () | 871781..872044 | + | 264 | Protein_815 | ISL3 family transposase ISSau8 | Transposase |
| FP480_RS04245 () | 872319..872810 | - | 492 | WP_001667277.1 | IS30 family transposase ISSau5 | Transposase |
| FP480_RS04250 () | 872776..873282 | - | 507 | WP_000163139.1 | IS30 family transposase ISSau5 | Transposase |
| FP480_RS04255 () | 873394..873756 | - | 363 | WP_000166624.1 | cystatin-like fold lipoprotein | - |
| FP480_RS04260 () | 873805..874398 | - | 594 | WP_000768323.1 | hypothetical protein | - |
| FP480_RS04265 () | 874405..875442 | - | 1038 | WP_000247512.1 | CHAP domain-containing protein | - |
| FP480_RS04270 () | 875432..877345 | - | 1914 | WP_145411516.1 | hypothetical protein | - |
| FP480_RS14860 () | 877361..877528 | - | 168 | WP_001031438.1 | hypothetical protein | - |
| FP480_RS04275 () | 877541..878896 | - | 1356 | WP_000178428.1 | cell division protein FtsK | - |
| FP480_RS04280 () | 878954..879202 | - | 249 | WP_001258263.1 | hypothetical protein | - |
| FP480_RS04290 () | 880310..882805 | - | 2496 | WP_000420494.1 | ATP-binding protein | - |
| FP480_RS04295 () | 882840..883229 | - | 390 | WP_000358149.1 | hypothetical protein | - |
| FP480_RS04300 () | 883235..883495 | - | 261 | WP_000400523.1 | hypothetical protein | - |
| FP480_RS04305 () | 883500..884561 | - | 1062 | WP_001021516.1 | conjugal transfer protein | - |
| FP480_RS04310 () | 884634..885722 | - | 1089 | WP_000431197.1 | replication initiation factor domain-containing protein | - |
| FP480_RS04315 () | 885902..886204 | - | 303 | WP_000398119.1 | hypothetical protein | - |
| FP480_RS04320 () | 886208..886543 | - | 336 | WP_000312573.1 | DUF961 family protein | - |
| FP480_RS04325 () | 886582..886884 | - | 303 | WP_000572393.1 | hypothetical protein | - |
| FP480_RS04330 () | 887041..887325 | - | 285 | WP_000807442.1 | hypothetical protein | - |
| FP480_RS04335 () | 887377..888431 | + | 1055 | Protein_834 | ISL3 family transposase ISSau8 | Transposase |
| FP480_RS04340 () | 888428..888748 | - | 321 | WP_001825748.1 | hypothetical protein | - |
| FP480_RS04345 () | 889028..889675 | - | 648 | WP_001187614.1 | HD domain-containing protein | - |
| FP480_RS04350 () | 889703..891187 | - | 1485 | WP_000571550.1 | cardiolipin synthase | - |
| FP480_RS04355 () | 891353..891646 | + | 294 | WP_000138932.1 | copper-sensing transcriptional repressor CsoR | Antitoxin Detail |
| FP480_RS04360 () | 891658..891867 | + | 210 | WP_000581792.1 | heavy-metal-associated domain-containing protein | Toxin Detail |
| FP480_RS04365 () | 891995..892132 | + | 138 | WP_000828354.1 | hypothetical protein | - |
| FP480_RS04370 () | 892396..893598 | - | 1203 | WP_001109939.1 | rod shape-determining protein RodA | - |
| FP480_RS04375 () | 893916..894986 | + | 1071 | WP_000159641.1 | D-alanine--D-alanine ligase | - |
| FP480_RS04380 () | 895001..896356 | + | 1356 | WP_000611457.1 | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase | - |
| FP480_RS04385 () | 896872..898392 | + | 1521 | WP_001178939.1 | DEAD/DEAH box helicase | - |
| FP480_RS04390 () | 898745..899440 | - | 696 | WP_001190840.1 | response regulator transcription factor | - |
| FP480_RS04395 () | 899440..902097 | - | 2658 | WP_145411517.1 | sensor histidine kinase KdpD | - |
| FP480_RS04400 () | 902235..902345 | + | 111 | WP_001789641.1 | K(+)-transporting ATPase subunit F | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|