MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 113858 bp
Accession: NZ_CP041974 Location: 1..113858 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain NCCP 16207 Replicon: plasmid unnamed1
Accession: NZ_CP041974 Location: 1..113858 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain NCCP 16207 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FPL16_RS00010 () | 8..552 | - | 545 | Protein_1 | carbonic anhydrase | - |
| FPL16_RS00015 () | 1206..1694 | - | 489 | WP_001135407.1 | hypothetical protein | - |
| FPL16_RS00020 () | 1953..3068 | + | 1116 | WP_001247118.1 | DNA-binding protein | - |
| FPL16_RS00025 () | 3154..3570 | + | 417 | WP_001541564.1 | hypothetical protein | - |
| FPL16_RS00030 () | 3754..4089 | + | 336 | WP_001527010.1 | hypothetical protein | - |
| FPL16_RS00035 () | 4146..4712 | + | 567 | WP_001541562.1 | DUF2913 family protein | - |
| FPL16_RS00040 () | 4744..5685 | - | 942 | WP_000728917.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| FPL16_RS00045 () | 6100..7305 | + | 1206 | WP_000427676.1 | AAA family ATPase | - |
| FPL16_RS00050 () | 7305..8279 | + | 975 | WP_000064274.1 | ParB/RepB/Spo0J family partition protein | - |
| FPL16_RS00055 () | 8361..9635 | - | 1275 | WP_022743179.1 | Y-family DNA polymerase | - |
| FPL16_RS00060 () | 9635..10057 | - | 423 | WP_000925627.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| FPL16_RS00065 () | 10568..11038 | + | 471 | WP_000490265.1 | hypothetical protein | - |
| FPL16_RS00070 () | 11031..11387 | + | 357 | WP_000369839.1 | hypothetical protein | - |
| FPL16_RS00075 () | 11769..12449 | + | 681 | WP_000088645.1 | DNA methylase | - |
| FPL16_RS00080 () | 12449..12670 | + | 222 | WP_001109588.1 | hypothetical protein | - |
| FPL16_RS00085 () | 12726..13139 | + | 414 | WP_000990114.1 | DUF1380 family protein | - |
| FPL16_RS00090 () | 13211..13975 | + | 765 | WP_001246548.1 | membrane protein | - |
| FPL16_RS00100 () | 14471..14905 | + | 435 | WP_001200150.1 | antirestriction protein | - |
| FPL16_RS00105 () | 14972..15406 | + | 435 | WP_000274533.1 | DUF1380 family protein | - |
| FPL16_RS00110 () | 15642..15965 | + | 324 | WP_000015983.1 | DNA polymerase III subunit theta | - |
| FPL16_RS00115 () | 15929..16168 | + | 240 | WP_157662376.1 | hypothetical protein | - |
| FPL16_RS00120 () | 16762..17280 | + | 519 | WP_000741240.1 | single-stranded DNA-binding protein SSB2 | - |
| FPL16_RS00125 () | 17335..17577 | + | 243 | WP_000131520.1 | DUF905 domain-containing protein | - |
| FPL16_RS00130 () | 17646..19643 | + | 1998 | WP_000117513.1 | ParB/RepB/Spo0J family partition protein | - |
| FPL16_RS00135 () | 19683..20117 | + | 435 | WP_010999943.1 | conjugation system SOS inhibitor PsiB | - |
| FPL16_RS00140 () | 20114..20851 | + | 738 | WP_000581933.1 | plasmid SOS inhibition protein A | - |
| FPL16_RS25025 () | 21100..21258 | + | 159 | WP_001704449.1 | hypothetical protein | - |
| FPL16_RS25030 () | 21361..22179 | + | 819 | Protein_28 | DUF945 domain-containing protein | - |
| FPL16_RS00155 () | 22490..22960 | - | 471 | WP_001526856.1 | transglycosylase SLT domain-containing protein | - |
| FPL16_RS00160 () | 23375..23755 | + | 381 | WP_001151546.1 | relaxosome protein TraM | - |
| FPL16_RS00165 () | 23948..24634 | + | 687 | WP_000336297.1 | PAS domain-containing protein | - |
| FPL16_RS00170 () | 24729..24956 | + | 228 | WP_001676655.1 | conjugal transfer relaxosome protein TraY | - |
| FPL16_RS00175 () | 24998..25360 | + | 363 | WP_001274201.1 | type IV conjugative transfer system pilin TraA | - |
| FPL16_RS00180 () | 25375..25686 | + | 312 | WP_000012129.1 | type IV conjugative transfer system protein TraL | - |
| FPL16_RS00185 () | 25708..26274 | + | 567 | WP_000399768.1 | type IV conjugative transfer system protein TraE | - |
| FPL16_RS00190 () | 26261..27001 | + | 741 | WP_001230719.1 | type-F conjugative transfer system secretin TraK | - |
| FPL16_RS00195 () | 27001..28422 | + | 1422 | WP_000146700.1 | conjugal transfer protein TraB | - |
| FPL16_RS00200 () | 28412..29008 | + | 597 | WP_000527896.1 | conjugal transfer protein TraP | - |
| FPL16_RS00205 () | 28986..29231 | + | 246 | WP_010999944.1 | DUF2689 domain-containing protein | - |
| FPL16_RS00210 () | 29228..29743 | + | 516 | WP_001079995.1 | type IV conjugative transfer system lipoprotein TraV | - |
| FPL16_RS00215 () | 29878..30099 | + | 222 | WP_001278699.1 | conjugal transfer protein TraR | - |
| FPL16_RS00220 () | 30092..30559 | + | 468 | WP_000549562.1 | hypothetical protein | - |
| FPL16_RS00225 () | 30676..30939 | + | 264 | WP_001239256.1 | hypothetical protein | - |
| FPL16_RS00230 () | 30955..33603 | + | 2649 | WP_000793310.1 | type IV secretion system protein TraC | - |
| FPL16_RS00235 () | 33578..33964 | + | 387 | WP_000105164.1 | type-F conjugative transfer system protein TrbI | - |
| FPL16_RS00240 () | 33961..34593 | + | 633 | WP_000871995.1 | type-F conjugative transfer system protein TraW | - |
| FPL16_RS00245 () | 34590..35582 | + | 993 | WP_000833320.1 | conjugal transfer pilus assembly protein TraU | - |
| FPL16_RS00250 () | 35601..35909 | + | 309 | WP_010999945.1 | hypothetical protein | - |
| FPL16_RS00255 () | 35894..36532 | + | 639 | WP_000554823.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| FPL16_RS00260 () | 36569..36988 | + | 420 | WP_001229397.1 | HNH endonuclease | - |
| FPL16_RS00265 () | 36985..38811 | + | 1827 | WP_000827528.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| FPL16_RS00270 () | 38822..39037 | + | 216 | WP_000700023.1 | conjugal transfer protein TrbE | - |
| FPL16_RS00275 () | 39049..39798 | + | 750 | WP_001226854.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| FPL16_RS00280 () | 40012..40305 | + | 294 | WP_001233881.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| FPL16_RS00285 () | 40292..40840 | + | 549 | WP_022743183.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| FPL16_RS00290 () | 40830..42212 | + | 1383 | WP_001161719.1 | conjugal transfer protein TraH | - |
| FPL16_RS00295 () | 42209..45031 | + | 2823 | WP_001007086.1 | conjugal transfer mating pair stabilization protein TraG | - |
| FPL16_RS00300 () | 45047..45541 | + | 495 | WP_010999946.1 | entry exclusion protein | - |
| FPL16_RS00305 () | 45577..46308 | + | 732 | WP_022743186.1 | complement resistance protein TraT | - |
| FPL16_RS00310 () | 46685..48964 | + | 2280 | WP_110029902.1 | type IV conjugative transfer system coupling protein TraD | - |
| FPL16_RS00315 () | 48973..49371 | - | 399 | WP_000911322.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| FPL16_RS00320 () | 49371..49598 | - | 228 | WP_000450265.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| FPL16_RS00325 () | 49680..54938 | + | 5259 | WP_022743192.1 | conjugative transfer relaxase/helicase TraI | - |
| FPL16_RS00330 () | 54958..55698 | + | 741 | WP_000177629.1 | conjugal transfer pilus acetylase TraX | - |
| FPL16_RS00335 () | 55753..56316 | + | 564 | WP_000139307.1 | fertility inhibition protein FinO | - |
| FPL16_RS00340 () | 56431..56715 | + | 285 | WP_000477658.1 | hypothetical protein | - |
| FPL16_RS00345 () | 56728..56883 | + | 156 | WP_000983042.1 | hypothetical protein | - |
| FPL16_RS00350 () | 57049..57491 | + | 443 | Protein_68 | phospholipase | - |
| FPL16_RS00355 () | 57670..57936 | + | 267 | WP_010999936.1 | replication regulatory protein RepA | - |
| FPL16_RS00360 () | 58186..58263 | + | 78 | WP_001541552.1 | RepA leader peptide Tap | - |
| FPL16_RS00365 () | 58244..59125 | + | 882 | WP_001738692.1 | incFII family plasmid replication initiator RepA | - |
| FPL16_RS00370 () | 59985..60206 | + | 222 | WP_071533052.1 | SdiA-regulated domain-containing protein | - |
| FPL16_RS00375 () | 60303..61061 | - | 759 | WP_000417898.1 | AraC family transcriptional regulator | - |
| FPL16_RS00380 () | 61328..61885 | - | 558 | WP_000725062.1 | complement resistance protein Rck | - |
| FPL16_RS00385 () | 61975..62874 | - | 900 | WP_010999938.1 | YjiK family protein | - |
| FPL16_RS25035 () | 62871..63017 | - | 147 | WP_001192557.1 | hypothetical protein | - |
| FPL16_RS00390 () | 63007..63660 | - | 654 | WP_000178592.1 | DsbA family protein | - |
| FPL16_RS00395 () | 64071..64259 | + | 189 | WP_000957857.1 | hypothetical protein | - |
| FPL16_RS00400 () | 64269..65468 | + | 1200 | WP_000948429.1 | IS91 family transposase | - |
| FPL16_RS00405 () | 65632..65943 | - | 312 | WP_159413212.1 | helix-turn-helix transcriptional regulator | - |
| FPL16_RS00410 () | 65928..66140 | - | 213 | WP_000004313.1 | transcriptional regulator PefI | - |
| FPL16_RS00415 () | 66572..67447 | - | 876 | WP_014343944.1 | hypothetical protein | - |
| FPL16_RS00420 () | 67700..68257 | - | 558 | WP_010999940.1 | membrane protein | - |
| FPL16_RS00425 () | 68272..68964 | - | 693 | WP_001038510.1 | fimbrial chaperone PefD | - |
| FPL16_RS00430 () | 68957..71365 | - | 2409 | WP_000007893.1 | outer membrane usher protein PefC | - |
| FPL16_RS00435 () | 71592..72110 | - | 519 | WP_000748205.1 | major pilin PefA | - |
| FPL16_RS00440 () | 72385..72687 | - | 303 | WP_000979451.1 | transcriptional regulator PefB | - |
| FPL16_RS00445 () | 73406..73787 | + | 382 | Protein_88 | YgiW/YdeI family stress tolerance OB fold protein | - |
| FPL16_RS00450 () | 73956..74400 | + | 445 | Protein_89 | site-specific integrase | - |
| FPL16_RS00455 () | 74659..75648 | - | 990 | WP_001527061.1 | RepB family plasmid replication initiator protein | - |
| FPL16_RS00460 () | 76142..76438 | - | 297 | WP_001687482.1 | hypothetical protein | - |
| FPL16_RS00465 () | 76922..77443 | - | 522 | WP_010999942.1 | hypothetical protein | - |
| FPL16_RS00470 () | 78119..78337 | + | 219 | WP_000813641.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| FPL16_RS00475 () | 78339..78644 | + | 306 | WP_001159863.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| FPL16_RS00480 () | 78646..78936 | + | 291 | WP_001266176.1 | hypothetical protein | - |
| FPL16_RS00485 () | 78933..79454 | + | 522 | WP_000198608.1 | hypothetical protein | - |
| FPL16_RS00490 () | 79489..80271 | + | 783 | WP_000082169.1 | site-specific integrase | - |
| FPL16_RS00495 () | 80280..80993 | + | 714 | Protein_98 | EAL domain-containing protein | - |
| FPL16_RS00500 () | 80997..81506 | + | 510 | WP_001541544.1 | CaiF/GrlA family transcriptional regulator | - |
| FPL16_RS00505 () | 81500..81985 | + | 486 | WP_000905606.1 | membrane protein | - |
| FPL16_RS00510 () | 82262..82549 | - | 288 | WP_071530243.1 | hypothetical protein | - |
| FPL16_RS00515 () | 82705..83265 | + | 561 | WP_000900095.1 | inverse autotransporter beta domain-containing protein | - |
| FPL16_RS00520 () | 83332..83682 | - | 351 | WP_001541541.1 | helix-turn-helix domain-containing protein | - |
| FPL16_RS00525 () | 83739..84163 | + | 425 | Protein_104 | IS200/IS605 family transposase | - |
| FPL16_RS00530 () | 84290..84940 | - | 651 | WP_001575489.1 | SPI-2 type III secretion system effector cysteine hydrolase SpvD | - |
| FPL16_RS00535 () | 85201..85926 | - | 726 | WP_001122242.1 | type III secretion system effector phosphothreonine lyase SpvC | - |
| FPL16_RS00540 () | 86207..87982 | - | 1776 | WP_001676648.1 | SPI-2 type III secretion system effector NAD(+)--protein-arginine ADP-ribosyltransferase SpvB | - |
| FPL16_RS25040 () | 88034..88201 | - | 168 | WP_001526987.1 | hypothetical protein | - |
| FPL16_RS00545 () | 88164..88931 | - | 768 | WP_001526990.1 | virulence protein SpvA | - |
| FPL16_RS00550 () | 89105..89269 | - | 165 | WP_001576629.1 | glycoside hydrolase family protein | - |
| FPL16_RS00555 () | 89443..90336 | - | 894 | WP_000346691.1 | virulence genes transcriptional activator SpvR | - |
| FPL16_RS00560 () | 90945..91982 | + | 1038 | WP_001121399.1 | IS630 family transposase | - |
| FPL16_RS00565 () | 92171..93196 | - | 1026 | WP_001576625.1 | ExeA family protein | - |
| FPL16_RS00570 () | 93129..94793 | - | 1665 | WP_000098783.1 | IS481 family transposase | - |
| FPL16_RS00575 () | 94777..95337 | - | 561 | WP_001240331.1 | recombinase family protein | - |
| FPL16_RS00580 () | 95544..96284 | - | 741 | WP_001541566.1 | carbonic anhydrase | - |
| FPL16_RS00585 () | 96939..97427 | - | 489 | WP_001135407.1 | hypothetical protein | - |
| FPL16_RS00590 () | 97686..98801 | + | 1116 | WP_001247118.1 | DNA-binding protein | - |
| FPL16_RS00595 () | 98887..99303 | + | 417 | WP_001541564.1 | hypothetical protein | - |
| FPL16_RS00600 () | 99487..99822 | + | 336 | WP_001527010.1 | hypothetical protein | - |
| FPL16_RS00605 () | 99879..100445 | + | 567 | WP_001541562.1 | DUF2913 family protein | - |
| FPL16_RS00610 () | 100477..101418 | - | 942 | WP_000728917.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| FPL16_RS00615 () | 101833..103038 | + | 1206 | WP_000427676.1 | AAA family ATPase | - |
| FPL16_RS00620 () | 103038..104012 | + | 975 | WP_000064274.1 | ParB/RepB/Spo0J family partition protein | - |
| FPL16_RS00625 () | 104094..105368 | - | 1275 | WP_022743179.1 | Y-family DNA polymerase | - |
| FPL16_RS00630 () | 105368..105789 | - | 422 | Protein_126 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| FPL16_RS00635 () | 106300..106770 | + | 471 | WP_000490265.1 | hypothetical protein | - |
| FPL16_RS00640 () | 106763..107119 | + | 357 | WP_000369839.1 | hypothetical protein | - |
| FPL16_RS00645 () | 107501..108181 | + | 681 | WP_000088645.1 | DNA methylase | - |
| FPL16_RS00650 () | 108181..108402 | + | 222 | WP_001109588.1 | hypothetical protein | - |
| FPL16_RS00655 () | 108457..108870 | + | 414 | WP_000990114.1 | DUF1380 family protein | - |
| FPL16_RS00660 () | 108942..109705 | + | 764 | Protein_132 | hypothetical protein | - |
| FPL16_RS00670 () | 110200..110634 | + | 435 | WP_001200150.1 | antirestriction protein | - |
| FPL16_RS00675 () | 110701..111133 | + | 433 | Protein_134 | DUF1380 family protein | - |
| FPL16_RS00680 () | 111368..111690 | + | 323 | Protein_135 | DNA polymerase III subunit theta | - |
| FPL16_RS00685 () | 111654..111899 | + | 246 | WP_157872078.1 | hypothetical protein | - |
| FPL16_RS00690 () | 112487..112999 | + | 513 | Protein_137 | single-stranded DNA-binding protein SSB2 | - |
| FPL16_RS00695 () | 113054..113305 | + | 252 | WP_159413213.1 | DUF905 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|