MGE detailed information
MGE type: IScluster/Tn MGE length: 4943 bp
Accession: NZ_CP041876 Location: 3800712..3805654 Organism: Mycobacterium tuberculosis strain 1-0006P6C4 Replicon: chromosome
Accession: NZ_CP041876 Location: 3800712..3805654 Organism: Mycobacterium tuberculosis strain 1-0006P6C4 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FPJ30_RS17670 () | 3796547..3797437 | - | 891 | WP_003417908.1 | diterpene synthase | - |
| FPJ30_RS17675 () | 3797446..3799284 | - | 1839 | WP_003918607.1 | 1-deoxy-D-xylulose-5-phosphate synthase | - |
| FPJ30_RS17680 () | 3799281..3800270 | - | 990 | WP_003417912.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| FPJ30_RS17685 () | 3800270..3800659 | - | 390 | Protein_3493 | polyprenyl synthetase family protein | - |
| FPJ30_RS17690 () | 3800712..3801973 | + | 1262 | WP_087902221.1 | IS3 family transposase IS987 | Transposase |
| FPJ30_RS17695 () | 3802015..3802680 | - | 666 | Protein_3495 | polyprenyl synthetase family protein | - |
| FPJ30_RS17700 () | 3803434..3803826 | - | 393 | WP_003417916.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| FPJ30_RS17705 () | 3803826..3804101 | - | 276 | WP_003912214.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| FPJ30_RS17710 () | 3804313..3805654 | + | 1342 | Protein_3498 | ISNCY family transposase ISRjo3 | Transposase |
| FPJ30_RS17715 () | 3805844..3808021 | + | 2178 | WP_016330440.1 | PE family protein | - |
| FPJ30_RS17720 () | 3808092..3808964 | - | 873 | WP_003417929.1 | 3-hydroxyacyl-thioester dehydratase HtdY | - |
| FPJ30_RS17725 () | 3809038..3809748 | + | 711 | WP_003417932.1 | phosphoglycerate mutase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Mycobacterium tuberculosis H37Rv | IScluster/Tn | TA131 | NC_000962 | 3795100..3801463 | 0.008 |