MGE detailed information
MGE type: IScluster/Tn MGE length: 4943 bp
Accession: NZ_CP041789 Location: 3795972..3800914 Organism: Mycobacterium tuberculosis strain SEA17020028P6C4 Replicon: chromosome
Accession: NZ_CP041789 Location: 3795972..3800914 Organism: Mycobacterium tuberculosis strain SEA17020028P6C4 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FPK21_RS17660 () | 3791807..3792697 | - | 891 | WP_003417908.1 | diterpene synthase | - |
| FPK21_RS17665 () | 3792706..3794544 | - | 1839 | WP_003918607.1 | 1-deoxy-D-xylulose-5-phosphate synthase | - |
| FPK21_RS17670 () | 3794541..3795530 | - | 990 | WP_003417912.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| FPK21_RS17675 () | 3795530..3795919 | - | 390 | Protein_3491 | polyprenyl synthetase family protein | - |
| FPK21_RS17680 () | 3795972..3797233 | + | 1262 | WP_087902221.1 | IS3 family transposase IS987 | Transposase |
| FPK21_RS17685 () | 3797275..3797940 | - | 666 | Protein_3493 | polyprenyl synthetase family protein | - |
| FPK21_RS17690 () | 3798694..3799086 | - | 393 | WP_003417916.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| FPK21_RS17695 () | 3799086..3799361 | - | 276 | WP_003912214.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| FPK21_RS17700 () | 3799573..3800914 | + | 1342 | Protein_3496 | ISNCY family transposase ISRjo3 | Transposase |
| FPK21_RS17705 () | 3801104..3803281 | + | 2178 | WP_016330440.1 | PE family protein | - |
| FPK21_RS17710 () | 3803352..3804224 | - | 873 | WP_003906098.1 | 3-hydroxyacyl-thioester dehydratase HtdY | - |
| FPK21_RS17715 () | 3804298..3805008 | + | 711 | WP_003417932.1 | phosphoglycerate mutase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Mycobacterium tuberculosis H37Rv | IScluster/Tn | TA131 | NC_000962 | 3795100..3801463 | 0.008 |