MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 62666 bp
Accession: NZ_CP041782 Location: 1..62666 Organism: Xanthomonas citri pv. glycines strain 8ra Replicon: plasmid unnamed1
Accession: NZ_CP041782 Location: 1..62666 Organism: Xanthomonas citri pv. glycines strain 8ra Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FPK90_RS24300 () | 1..1435 | + | 1435 | Protein_0 | TAL effector repeat-containing protein | - |
| FPK90_RS24305 () | 1539..2001 | + | 463 | Protein_1 | avirulence protein | - |
| FPK90_RS24310 () | 2298..2549 | - | 252 | Protein_2 | Tn3 family transposase TnpA_ISXc4 | Transposase |
| FPK90_RS24315 () | 2554..2973 | - | 420 | WP_003491210.1 | putative toxin-antitoxin system toxin component, PIN family | - |
| FPK90_RS24320 () | 2973..3212 | - | 240 | WP_003491212.1 | ribbon-helix-helix domain-containing protein | - |
| FPK90_RS24325 () | 3424..4347 | + | 924 | WP_012477429.1 | Tn3 family transposase TnpR_ISXc4 | Transposase |
| FPK90_RS24330 () | 5282..6202 | - | 921 | WP_012477431.1 | RepA | - |
| FPK90_RS24335 () | 6268..7074 | - | 807 | WP_016851361.1 | serine protease | - |
| FPK90_RS24980 () | 7071..7229 | - | 159 | WP_154666355.1 | hypothetical protein | - |
| FPK90_RS24340 () | 7452..7706 | - | 255 | WP_012477434.1 | hypothetical protein | - |
| FPK90_RS24345 () | 7706..8356 | - | 651 | WP_012477435.1 | ParA family protein | - |
| FPK90_RS24350 () | 8423..9067 | - | 645 | WP_012477436.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| FPK90_RS24355 () | 9064..9291 | - | 228 | WP_012477437.1 | hypothetical protein | - |
| FPK90_RS24360 () | 9557..9814 | + | 258 | WP_012477454.1 | plasmid stable inheritance protein I | Antitoxin Detail |
| FPK90_RS24365 () | 9814..10146 | + | 333 | WP_012477455.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| FPK90_RS24370 () | 10235..11053 | - | 819 | WP_012477456.1 | hypothetical protein | - |
| FPK90_RS24375 () | 11081..13258 | - | 2178 | WP_012477457.1 | Protein TraI | Relaxase |
| FPK90_RS24380 () | 13260..13562 | - | 303 | WP_012477458.1 | hypothetical protein | - |
| FPK90_RS24385 () | 13850..14269 | + | 420 | WP_012477459.1 | hypothetical protein | - |
| FPK90_RS24390 () | 14259..14963 | + | 705 | WP_007975110.1 | hypothetical protein | - |
| FPK90_RS24395 () | 14960..15550 | + | 591 | WP_012477461.1 | hypothetical protein | - |
| FPK90_RS24400 () | 15581..17113 | + | 1533 | WP_012477462.1 | type IV secretion system DNA-binding domain-containing protein | - |
| FPK90_RS24405 () | 17361..17744 | + | 384 | WP_012477463.1 | hypothetical protein | - |
| FPK90_RS24410 () | 17741..18451 | + | 711 | WP_012477464.1 | P-type DNA transfer protein VirB5 | - |
| FPK90_RS24415 () | 18448..18684 | + | 237 | WP_012477465.1 | EexN family lipoprotein | - |
| FPK90_RS24420 () | 18689..19729 | + | 1041 | WP_012477466.1 | type IV secretion system protein | - |
| FPK90_RS24425 () | 20082..20429 | - | 348 | Protein_26 | UPF0149 family protein | - |
| FPK90_RS24435 () | 20999..21262 | + | 264 | WP_016851366.1 | hypothetical protein | - |
| FPK90_RS24440 () | 21286..21519 | - | 234 | WP_124632126.1 | hypothetical protein | - |
| FPK90_RS24445 () | 21531..22393 | - | 863 | Protein_29 | hypothetical protein | - |
| FPK90_RS24450 () | 22390..22848 | - | 459 | WP_016851367.1 | hypothetical protein | - |
| FPK90_RS24465 () | 24356..28054 | + | 3699 | WP_144363164.1 | TAL effector repeat-containing protein | - |
| FPK90_RS24470 () | 28165..28620 | + | 456 | Protein_33 | avirulence protein | - |
| FPK90_RS24475 () | 28917..29168 | - | 252 | Protein_34 | Tn3 family transposase TnpA_ISXc4 | Transposase |
| FPK90_RS24480 () | 29173..29592 | - | 420 | WP_003491210.1 | putative toxin-antitoxin system toxin component, PIN family | - |
| FPK90_RS24485 () | 29592..29831 | - | 240 | WP_003491212.1 | ribbon-helix-helix domain-containing protein | - |
| FPK90_RS24490 () | 30043..30966 | + | 924 | WP_012477429.1 | Tn3 family transposase TnpR_ISXc4 | Transposase |
| FPK90_RS24495 () | 31901..32821 | - | 921 | WP_012477431.1 | RepA | - |
| FPK90_RS24500 () | 32887..33693 | - | 807 | WP_016851361.1 | serine protease | - |
| FPK90_RS24985 () | 33690..33848 | - | 159 | WP_154666355.1 | hypothetical protein | - |
| FPK90_RS24505 () | 34071..34325 | - | 255 | WP_012477434.1 | hypothetical protein | - |
| FPK90_RS24510 () | 34325..34975 | - | 651 | WP_012477435.1 | ParA family protein | - |
| FPK90_RS24515 () | 35042..35686 | - | 645 | WP_012477436.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| FPK90_RS24520 () | 35683..35910 | - | 228 | WP_012477437.1 | hypothetical protein | - |
| FPK90_RS24525 () | 36176..36433 | + | 258 | WP_012477454.1 | plasmid stable inheritance protein I | Antitoxin Detail |
| FPK90_RS24530 () | 36433..36765 | + | 333 | WP_012477455.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| FPK90_RS24535 () | 36854..37672 | - | 819 | WP_012477456.1 | hypothetical protein | - |
| FPK90_RS24540 () | 37700..39877 | - | 2178 | WP_012477457.1 | Protein TraI | Relaxase |
| FPK90_RS24545 () | 39879..40181 | - | 303 | WP_012477458.1 | hypothetical protein | - |
| FPK90_RS24550 () | 40468..40887 | + | 420 | WP_012477459.1 | hypothetical protein | - |
| FPK90_RS24555 () | 40877..41581 | + | 705 | WP_007975110.1 | hypothetical protein | - |
| FPK90_RS24560 () | 41578..42168 | + | 591 | WP_012477461.1 | hypothetical protein | - |
| FPK90_RS24565 () | 42199..43731 | + | 1533 | WP_012477462.1 | type IV secretion system DNA-binding domain-containing protein | - |
| FPK90_RS24570 () | 43979..44362 | + | 384 | WP_012477463.1 | hypothetical protein | - |
| FPK90_RS24575 () | 44359..45069 | + | 711 | WP_012477464.1 | P-type DNA transfer protein VirB5 | - |
| FPK90_RS24580 () | 45066..45302 | + | 237 | WP_012477465.1 | EexN family lipoprotein | - |
| FPK90_RS24585 () | 45307..46347 | + | 1041 | WP_012477466.1 | type IV secretion system protein | - |
| FPK90_RS24590 () | 46700..47047 | - | 348 | Protein_58 | UPF0149 family protein | - |
| FPK90_RS24600 () | 47617..47880 | + | 264 | WP_016851366.1 | hypothetical protein | - |
| FPK90_RS24605 () | 47904..48137 | - | 234 | WP_124632126.1 | hypothetical protein | - |
| FPK90_RS24610 () | 48149..49011 | - | 863 | Protein_61 | hypothetical protein | - |
| FPK90_RS24615 () | 49008..49466 | - | 459 | WP_016851367.1 | hypothetical protein | - |
| FPK90_RS24630 () | 50974..54672 | + | 3699 | WP_144363164.1 | TAL effector repeat-containing protein | - |
| FPK90_RS24635 () | 54783..55238 | + | 456 | Protein_65 | avirulence protein | - |
| FPK90_RS24640 () | 55535..55786 | - | 252 | Protein_66 | Tn3 family transposase TnpA_ISXc4 | Transposase |
| FPK90_RS24645 () | 55791..56210 | - | 420 | WP_003491210.1 | putative toxin-antitoxin system toxin component, PIN family | - |
| FPK90_RS24650 () | 56210..56449 | - | 240 | WP_003491212.1 | ribbon-helix-helix domain-containing protein | - |
| FPK90_RS24655 () | 56661..57584 | + | 924 | WP_012477429.1 | Tn3 family transposase TnpR_ISXc4 | Transposase |
| FPK90_RS24660 () | 58519..59439 | - | 921 | WP_012477431.1 | RepA | - |
| FPK90_RS24665 () | 59505..60311 | - | 807 | WP_016851361.1 | serine protease | - |
| FPK90_RS24990 () | 60308..60466 | - | 159 | WP_154666355.1 | hypothetical protein | - |
| FPK90_RS24670 () | 60689..60943 | - | 255 | WP_012477434.1 | hypothetical protein | - |
| FPK90_RS24675 () | 60936..61593 | - | 658 | Protein_74 | ParA family protein | - |
| FPK90_RS24680 () | 61660..62307 | - | 648 | WP_144367968.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| FPK90_RS24685 () | 62304..62531 | - | 228 | WP_012477437.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|