MGE detailed information
MGE type: Mobilizable plasmid MGE length: 41171 bp
Accession: NZ_CP041756 Location: 1..41171 Organism: Pseudomonas sp. KBS0707 Replicon: plasmid unnamed2
Accession: NZ_CP041756 Location: 1..41171 Organism: Pseudomonas sp. KBS0707 Replicon: plasmid unnamed2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FFH21_RS29560 () | 1..1314 | + | 1314 | WP_116831358.1 | replication initiation protein | - |
| FFH21_RS29565 () | 1453..1878 | + | 426 | WP_046720382.1 | S24 family peptidase | - |
| FFH21_RS29570 () | 1871..3154 | + | 1284 | WP_054073200.1 | Y-family DNA polymerase | - |
| FFH21_RS29575 () | 3507..4541 | - | 1035 | WP_011168770.1 | IS110 family transposase ISPsy16 | Transposase |
| FFH21_RS29580 () | 4703..5002 | + | 300 | WP_054073125.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| FFH21_RS29585 () | 4999..5289 | + | 291 | WP_054073126.1 | putative addiction module antidote protein | Antitoxin Detail |
| FFH21_RS29590 () | 5361..5699 | + | 339 | WP_054073127.1 | hypothetical protein | - |
| FFH21_RS29595 () | 6174..6830 | + | 657 | WP_054073128.1 | hypothetical protein | - |
| FFH21_RS29600 () | 6885..7139 | + | 255 | WP_054073129.1 | hypothetical protein | - |
| FFH21_RS29610 () | 7534..8073 | + | 540 | WP_054073130.1 | hypothetical protein | - |
| FFH21_RS29615 () | 8332..8973 | + | 642 | WP_054073131.1 | SOS response-associated peptidase | - |
| FFH21_RS29620 () | 9809..10759 | - | 951 | WP_054073132.1 | IS91 family transposase ISWz1 | Transposase |
| FFH21_RS29625 () | 10761..11444 | - | 684 | WP_054073133.1 | hypothetical protein | - |
| FFH21_RS29630 () | 11623..12324 | + | 702 | WP_054073083.1 | FadR family transcriptional regulator | - |
| FFH21_RS29635 () | 12388..13584 | + | 1197 | WP_054073159.1 | L-2-hydroxyglutarate oxidase | - |
| FFH21_RS29640 () | 13621..14967 | + | 1347 | WP_081007188.1 | MFS transporter | - |
| FFH21_RS29645 () | 15030..15212 | + | 183 | WP_052810478.1 | hypothetical protein | - |
| FFH21_RS29650 () | 15217..15573 | - | 357 | WP_054073135.1 | helix-turn-helix domain-containing protein | - |
| FFH21_RS29655 () | 15818..16351 | + | 534 | WP_054073136.1 | transcriptional regulator | - |
| FFH21_RS29660 () | 16440..16682 | + | 243 | WP_054073137.1 | hypothetical protein | - |
| FFH21_RS29665 () | 16695..17402 | + | 708 | WP_054073138.1 | Type IV secretion system protein virB1 | VF |
| FFH21_RS29670 () | 17402..17737 | + | 336 | WP_016569406.1 | hypothetical protein | - |
| FFH21_RS29675 () | 17750..18151 | + | 402 | Protein_22 | VirB3 family type IV secretion system protein | - |
| FFH21_RS29680 () | 18087..20639 | + | 2553 | WP_178114232.1 | conjugal transfer protein | - |
| FFH21_RS29685 () | 20636..21322 | + | 687 | WP_054073139.1 | P-type DNA transfer protein VirB5 | - |
| FFH21_RS29690 () | 21355..21708 | + | 354 | WP_054073140.1 | hypothetical protein | - |
| FFH21_RS29695 () | 21719..22651 | + | 933 | WP_054073141.1 | type IV secretion system protein | - |
| FFH21_RS29700 () | 22719..23021 | + | 303 | WP_054073142.1 | hypothetical protein | - |
| FFH21_RS29705 () | 23059..23847 | + | 789 | WP_054073143.1 | type IV secretion system protein | - |
| FFH21_RS29710 () | 23837..24646 | + | 810 | WP_054073144.1 | P-type conjugative transfer protein VirB9 | - |
| FFH21_RS29715 () | 24633..26000 | + | 1368 | WP_054073145.1 | Type IV secretion system protein virB10 | VF |
| FFH21_RS29720 () | 26010..27041 | + | 1032 | WP_003407093.1 | Type IV secretion system protein VirB11 | VF |
| FFH21_RS29725 () | 27051..27407 | + | 357 | WP_016569416.1 | hypothetical protein | - |
| FFH21_RS29730 () | 27532..27762 | + | 231 | WP_054073146.1 | hypothetical protein | - |
| FFH21_RS29735 () | 27762..29429 | + | 1668 | WP_054073147.1 | type IV secretory system conjugative DNA transfer family protein | - |
| FFH21_RS29740 () | 29470..29832 | + | 363 | WP_054073148.1 | Killer protein | - |
| FFH21_RS29745 () | 29860..32025 | + | 2166 | WP_054073149.1 | type IA DNA topoisomerase | - |
| FFH21_RS29750 () | 32053..32820 | + | 768 | WP_054073150.1 | hypothetical protein | - |
| FFH21_RS29755 () | 32885..33490 | + | 606 | WP_054073151.1 | single-stranded DNA-binding protein | - |
| FFH21_RS29765 () | 33796..34539 | + | 744 | WP_054073152.1 | hypothetical protein | - |
| FFH21_RS29770 () | 34536..35108 | + | 573 | WP_054073153.1 | hypothetical protein | - |
| FFH21_RS29775 () | 35134..35673 | - | 540 | WP_054073154.1 | hypothetical protein | - |
| FFH21_RS29780 () | 35888..36235 | + | 348 | WP_054073155.1 | hypothetical protein | Relaxase |
| FFH21_RS29790 () | 37953..39962 | + | 2010 | WP_054073161.1 | hypothetical protein | - |
| FFH21_RS29795 () | 40030..40458 | + | 429 | WP_054073157.1 | winged helix-turn-helix domain-containing protein | - |
| FFH21_RS29800 () | 40615..40818 | + | 204 | WP_054073158.1 | ribbon-helix-helix protein, CopG family | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|