MGE detailed information
MGE type: Prophage MGE length: 36965 bp
Accession: NZ_CP041722 Location: 1098973..1135937 Organism: Staphylococcus lugdunensis strain SL13 Replicon: chromosome
Accession: NZ_CP041722 Location: 1098973..1135937 Organism: Staphylococcus lugdunensis strain SL13 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FO454_RS04990 () | 1094834..1095817 | + | 984 | WP_002459880.1 | diphosphomevalonate decarboxylase | - |
| FO454_RS04995 () | 1095830..1096906 | + | 1077 | WP_150891439.1 | phosphomevalonate kinase | - |
| FO454_RS05000 () | 1097072..1097413 | + | 342 | WP_002479428.1 | DUF1450 domain-containing protein | - |
| FO454_RS05005 () | 1097754..1098944 | - | 1191 | Protein_958 | FAD-dependent oxidoreductase | - |
| FO454_RS05010 () | 1098973..1100355 | - | 1383 | WP_085317587.1 | Tn3 family transposase TnpR_ISAzs17 | Transposase |
| FO454_RS05015 () | 1100421..1100621 | - | 201 | WP_070866295.1 | hypothetical protein | - |
| FO454_RS05020 () | 1100779..1101300 | - | 522 | WP_070866271.1 | hypothetical protein | - |
| FO454_RS05025 () | 1101319..1101780 | - | 462 | WP_070866272.1 | ImmA/IrrE family metallo-endopeptidase | Toxin Detail |
| FO454_RS05030 () | 1101792..1102115 | - | 324 | WP_070817183.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| FO454_RS05035 () | 1102280..1102528 | + | 249 | WP_070817182.1 | helix-turn-helix domain-containing protein | - |
| FO454_RS13130 () | 1102544..1102714 | + | 171 | WP_176746548.1 | hypothetical protein | - |
| FO454_RS05040 () | 1102703..1102912 | - | 210 | WP_000033736.1 | hypothetical protein | - |
| FO454_RS05045 () | 1102959..1103831 | + | 873 | WP_070866296.1 | ParB N-terminal domain-containing protein | - |
| FO454_RS05050 () | 1103824..1104591 | + | 768 | WP_070866273.1 | ParB N-terminal domain-containing protein | - |
| FO454_RS05055 () | 1105013..1105210 | + | 198 | WP_070866274.1 | helix-turn-helix transcriptional regulator | - |
| FO454_RS05060 () | 1105224..1105535 | + | 312 | WP_070866275.1 | hypothetical protein | - |
| FO454_RS05065 () | 1105483..1105866 | - | 384 | WP_002478859.1 | hypothetical protein | - |
| FO454_RS05070 () | 1106094..1106273 | + | 180 | WP_070866276.1 | hypothetical protein | - |
| FO454_RS05075 () | 1106342..1106827 | + | 486 | WP_002478865.1 | siphovirus Gp157 family protein | - |
| FO454_RS05080 () | 1106828..1107502 | + | 675 | WP_002478866.1 | ERF family protein | - |
| FO454_RS05085 () | 1107499..1107915 | + | 417 | WP_014533250.1 | single-stranded DNA-binding protein | - |
| FO454_RS05090 () | 1107930..1108607 | + | 678 | WP_070866279.1 | hypothetical protein | - |
| FO454_RS05095 () | 1108597..1109337 | + | 741 | WP_070866280.1 | helix-turn-helix domain-containing protein | - |
| FO454_RS05100 () | 1109350..1110135 | + | 786 | WP_070866281.1 | ATP-binding protein | - |
| FO454_RS13135 () | 1110132..1110296 | + | 165 | WP_014533254.1 | hypothetical protein | - |
| FO454_RS05105 () | 1110286..1110528 | + | 243 | WP_014533255.1 | hypothetical protein | - |
| FO454_RS05110 () | 1110537..1110944 | + | 408 | WP_002478873.1 | RusA family crossover junction endodeoxyribonuclease | - |
| FO454_RS05115 () | 1110941..1111255 | + | 315 | WP_002478874.1 | hypothetical protein | - |
| FO454_RS05120 () | 1111377..1111817 | + | 441 | WP_150891441.1 | DUF3310 domain-containing protein | - |
| FO454_RS05125 () | 1111804..1112037 | + | 234 | WP_070817172.1 | DUF1024 family protein | - |
| FO454_RS05130 () | 1112045..1112296 | + | 252 | WP_070817171.1 | hypothetical protein | - |
| FO454_RS05135 () | 1112315..1112830 | + | 516 | WP_070866283.1 | dUTP pyrophosphatase | - |
| FO454_RS05140 () | 1112867..1113016 | + | 150 | WP_150891443.1 | DUF1381 domain-containing protein | - |
| FO454_RS05145 () | 1113009..1113191 | + | 183 | WP_150891446.1 | regulator | - |
| FO454_RS13140 () | 1113188..1113337 | + | 150 | WP_012990987.1 | hypothetical protein | - |
| FO454_RS05150 () | 1113334..1113750 | + | 417 | WP_012990986.1 | hypothetical protein | - |
| FO454_RS05155 () | 1114053..1114481 | + | 429 | WP_012990985.1 | hypothetical protein | - |
| FO454_RS05160 () | 1114468..1115742 | + | 1275 | WP_012990984.1 | PBSX family phage terminase large subunit | - |
| FO454_RS05165 () | 1115754..1117205 | + | 1452 | WP_150891448.1 | phage portal protein | - |
| FO454_RS05170 () | 1117192..1118157 | + | 966 | WP_070866285.1 | minor capsid protein | - |
| FO454_RS05175 () | 1118476..1119066 | + | 591 | WP_070557760.1 | DUF4355 domain-containing protein | - |
| FO454_RS05180 () | 1119086..1119991 | + | 906 | WP_070647809.1 | capsid protein | - |
| FO454_RS05185 () | 1120006..1120245 | + | 240 | WP_070481522.1 | hypothetical protein | - |
| FO454_RS05190 () | 1120255..1120584 | + | 330 | WP_070481521.1 | phage head-tail connector protein | - |
| FO454_RS05195 () | 1120581..1120883 | + | 303 | WP_070866286.1 | hypothetical protein | - |
| FO454_RS05200 () | 1120883..1121224 | + | 342 | WP_070817163.1 | HK97 gp10 family phage protein | - |
| FO454_RS05205 () | 1121235..1121621 | + | 387 | WP_070817162.1 | hypothetical protein | - |
| FO454_RS05210 () | 1121640..1122203 | + | 564 | WP_070817161.1 | phage major tail protein, TP901-1 family | - |
| FO454_RS05215 () | 1122278..1122643 | + | 366 | WP_070481516.1 | tail assembly chaperone | - |
| FO454_RS05220 () | 1122688..1123053 | + | 366 | WP_070866287.1 | hypothetical protein | - |
| FO454_RS05225 () | 1123060..1126716 | + | 3657 | WP_070866288.1 | hypothetical protein | - |
| FO454_RS05230 () | 1126737..1127690 | + | 954 | WP_070866289.1 | phage tail family protein | - |
| FO454_RS05235 () | 1127707..1128804 | + | 1098 | WP_150891450.1 | hypothetical protein | - |
| FO454_RS05240 () | 1128823..1131006 | + | 2184 | WP_150891452.1 | phage tail protein | - |
| FO454_RS13145 () | 1131003..1131149 | + | 147 | WP_158519885.1 | hypothetical protein | - |
| FO454_RS05245 () | 1131183..1131479 | + | 297 | WP_085317551.1 | DUF2951 family protein | - |
| FO454_RS05250 () | 1131634..1134198 | + | 2565 | WP_085317549.1 | BppU family phage baseplate upper protein | - |
| FO454_RS05255 () | 1134255..1134527 | + | 273 | WP_002478910.1 | phage holin | - |
| FO454_RS05260 () | 1134527..1135937 | + | 1411 | Protein_1013 | N-acetylmuramoyl-L-alanine amidase | - |
| FO454_RS05265 () | 1137138..1138001 | + | 864 | Protein_1014 | PTS lactose transporter subunit IIBC | - |
| FO454_RS05270 () | 1138017..1139429 | + | 1413 | WP_150891454.1 | 6-phospho-beta-galactosidase | - |
| FO454_RS05275 () | 1139653..1140510 | + | 858 | WP_002460003.1 | alpha/beta hydrolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|