MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 140889 bp
Accession: NZ_CP041719 Location: 1..140889 Organism: Acidiphilium multivorum strain JZ-6 Replicon: plasmid unnamed3
Accession: NZ_CP041719 Location: 1..140889 Organism: Acidiphilium multivorum strain JZ-6 Replicon: plasmid unnamed3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FE249_RS19510 (FE249_19385) | 881..1420 | + | 540 | WP_241420069.1 | type I-E CRISPR-associated protein Cse2/CasB | - |
| FE249_RS19515 (FE249_19390) | 1420..2532 | + | 1113 | WP_241420070.1 | type I-E CRISPR-associated protein Cas7/Cse4/CasC | - |
| FE249_RS19520 (FE249_19395) | 2534..3283 | + | 750 | WP_241420071.1 | type I-E CRISPR-associated protein Cas5/CasD | - |
| FE249_RS19525 (FE249_19400) | 3289..3966 | + | 678 | WP_011930721.1 | type I-E CRISPR-associated protein Cas6/Cse3/CasE | - |
| FE249_RS19530 (FE249_19405) | 3959..4907 | + | 949 | Protein_5 | type I-E CRISPR-associated endonuclease Cas1e | - |
| FE249_RS19535 (FE249_19410) | 4888..5214 | + | 327 | WP_241420072.1 | type I-E CRISPR-associated endoribonuclease Cas2e | - |
| FE249_RS19540 (FE249_19415) | 7340..8374 | - | 1035 | WP_241418609.1 | IS630 family transposase ISAzo30 | Transposase |
| FE249_RS19545 (FE249_19420) | 8548..8775 | + | 228 | WP_241420073.1 | hypothetical protein | - |
| FE249_RS19550 (FE249_19425) | 8779..10767 | - | 1989 | WP_241420074.1 | replication initiation protein | - |
| FE249_RS19555 (FE249_19430) | 10842..11666 | - | 825 | WP_241420075.1 | hypothetical protein | - |
| FE249_RS19560 (FE249_19435) | 11663..12076 | - | 414 | WP_241420076.1 | hypothetical protein | - |
| FE249_RS19565 (FE249_19440) | 12249..12485 | + | 237 | WP_241420077.1 | hypothetical protein | - |
| FE249_RS19570 (FE249_19445) | 12629..13249 | + | 621 | WP_241420078.1 | Holliday junction branch migration protein RuvA | - |
| FE249_RS19575 (FE249_19450) | 13246..14244 | + | 999 | Protein_14 | Holliday junction branch migration DNA helicase RuvB | - |
| FE249_RS19580 (FE249_19455) | 14244..14795 | + | 552 | WP_241420079.1 | hypothetical protein | - |
| FE249_RS19585 (FE249_19460) | 14807..15130 | - | 324 | WP_241420080.1 | hypothetical protein | - |
| FE249_RS19590 | 15142..15429 | - | 288 | WP_043508881.1 | hypothetical protein | - |
| FE249_RS19595 (FE249_19470) | 15452..15841 | - | 390 | WP_241420081.1 | hypothetical protein | - |
| FE249_RS19600 (FE249_19475) | 16234..16827 | + | 594 | WP_231295211.1 | YceI family protein | - |
| FE249_RS19605 (FE249_19480) | 16820..17365 | + | 546 | WP_011930709.1 | cytochrome b/b6 domain-containing protein | - |
| FE249_RS19610 (FE249_19485) | 18216..19469 | + | 1254 | WP_011930454.1 | ISL3 family transposase ISDvu5 | Transposase |
| FE249_RS19615 (FE249_19490) | 19590..19793 | + | 204 | WP_241420082.1 | hypothetical protein | - |
| FE249_RS19620 (FE249_19495) | 19953..20219 | - | 267 | WP_241420083.1 | hypothetical protein | - |
| FE249_RS19625 (FE249_19500) | 20459..21779 | + | 1321 | Protein_24 | IS256 family transposase ISOan9 | Transposase |
| FE249_RS19630 (FE249_19505) | 21814..22779 | - | 966 | WP_241420084.1 | putative signaling protein | VF |
| FE249_RS19635 (FE249_19510) | 23482..23982 | + | 501 | WP_241420085.1 | hypothetical protein | - |
| FE249_RS19640 (FE249_19515) | 24119..24778 | + | 660 | WP_241420086.1 | LysE family transporter | - |
| FE249_RS19645 (FE249_19520) | 24785..25630 | - | 846 | WP_011930705.1 | DMT family transporter | - |
| FE249_RS19650 (FE249_19525) | 25734..26312 | - | 579 | WP_241420087.1 | Tn3 family transposase TnpR_ISAzs17 | Transposase |
| FE249_RS19655 (FE249_19530) | 26544..28151 | + | 1608 | WP_241420088.1 | AAA family ATPase | - |
| FE249_RS19660 (FE249_19535) | 28240..29031 | - | 792 | WP_241420089.1 | hypothetical protein | - |
| FE249_RS19665 (FE249_19540) | 29110..29592 | + | 483 | WP_241420090.1 | GNAT family N-acetyltransferase | - |
| FE249_RS19670 (FE249_19545) | 29727..30167 | + | 441 | WP_241420091.1 | VOC family protein | - |
| FE249_RS19675 (FE249_19550) | 30320..30994 | - | 675 | WP_241420092.1 | pyridoxamine 5'-phosphate oxidase family protein | - |
| FE249_RS19680 (FE249_19555) | 31103..32497 | + | 1395 | WP_241420093.1 | PLP-dependent aminotransferase family protein | - |
| FE249_RS19685 | 32591..32884 | + | 294 | WP_241420094.1 | hypothetical protein | - |
| FE249_RS19690 (FE249_19565) | 32902..33531 | - | 630 | WP_241420095.1 | hypothetical protein | - |
| FE249_RS19695 (FE249_19570) | 33856..34668 | + | 813 | WP_241420096.1 | metallophosphoesterase | - |
| FE249_RS19700 (FE249_19575) | 34674..35381 | + | 708 | WP_050751066.1 | metallophosphoesterase | - |
| FE249_RS19705 (FE249_19580) | 35525..35848 | + | 324 | WP_241420114.1 | DUF4031 domain-containing protein | - |
| FE249_RS19710 (FE249_19585) | 36024..36833 | - | 810 | WP_241420097.1 | IclR family transcriptional regulator | - |
| FE249_RS19715 | 37095..37556 | + | 462 | Protein_42 | ATP-binding cassette domain-containing protein | - |
| FE249_RS19720 (FE249_19595) | 37905..39215 | + | 1311 | WP_241420115.1 | ArgE/DapE family deacylase | - |
| FE249_RS19725 (FE249_19600) | 39232..39981 | + | 750 | WP_241420098.1 | NUDIX hydrolase | - |
| FE249_RS19730 (FE249_19605) | 40232..41396 | + | 1165 | Protein_45 | ArgE/DapE family deacylase | - |
| FE249_RS19735 (FE249_19610) | 41393..41602 | + | 210 | WP_043508890.1 | hypothetical protein | - |
| FE249_RS19740 (FE249_19615) | 41613..43106 | + | 1494 | WP_241420099.1 | sodium:solute symporter family protein | - |
| FE249_RS19745 (FE249_19620) | 43275..43403 | - | 129 | Protein_48 | IS256 family transposase | - |
| FE249_RS19750 (FE249_19625) | 43693..44937 | + | 1245 | WP_241420100.1 | IS200-IS605 family transposase ISMex43 | Transposase |
| FE249_RS19755 (FE249_19635) | 45145..45750 | + | 606 | WP_241420101.1 | restriction endonuclease | - |
| FE249_RS19760 (FE249_19640) | 45760..46161 | - | 402 | WP_241420102.1 | helix-turn-helix transcriptional regulator | - |
| FE249_RS19765 (FE249_19645) | 46288..47013 | - | 726 | WP_241420103.1 | hypothetical protein | - |
| FE249_RS19770 (FE249_19650) | 47010..47759 | - | 750 | WP_241420104.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| FE249_RS19775 | 47882..48046 | - | 165 | WP_241420105.1 | hypothetical protein | - |
| FE249_RS19780 (FE249_19655) | 48140..48379 | - | 240 | WP_011930687.1 | hypothetical protein | - |
| FE249_RS19785 | 48578..49225 | - | 648 | WP_043508896.1 | hypothetical protein | - |
| FE249_RS19790 (FE249_19665) | 49366..50643 | - | 1278 | WP_241420106.1 | Fic family protein | - |
| FE249_RS19795 (FE249_19670) | 50756..51463 | - | 708 | WP_241420107.1 | hypothetical protein | - |
| FE249_RS19800 (FE249_19675) | 51450..51896 | + | 447 | WP_241420108.1 | AAA family ATPase | - |
| FE249_RS19805 (FE249_19680) | 52050..52403 | + | 354 | WP_011930676.1 | MbcA/ParS/Xre antitoxin family protein | - |
| FE249_RS19810 (FE249_19685) | 52466..52921 | + | 456 | WP_050751071.1 | RES domain-containing protein | - |
| FE249_RS19815 (FE249_19690) | 52925..55549 | - | 2625 | WP_241420109.1 | sigma factor-like helix-turn-helix DNA-binding protein | - |
| FE249_RS19820 | 56194..56331 | - | 138 | WP_155856302.1 | hypothetical protein | VF |
| FE249_RS19825 (FE249_19695) | 56608..56874 | + | 267 | WP_035184947.1 | helix-turn-helix domain-containing protein | - |
| FE249_RS19830 (FE249_19700) | 56871..58184 | + | 1314 | WP_241420110.1 | type II toxin-antitoxin system HipA family toxin | - |
| FE249_RS19835 (FE249_19705) | 58160..58438 | + | 279 | Protein_66 | IS21 family transposase ISPkr1 | Transposase |
| FE249_RS19840 (FE249_19710) | 58647..58848 | + | 202 | Protein_67 | IS3 family transposase | - |
| FE249_RS19845 (FE249_19715) | 58890..59160 | - | 271 | Protein_68 | hypothetical protein | - |
| FE249_RS19850 (FE249_19720) | 59259..60293 | + | 1035 | WP_241418609.1 | IS630 family transposase ISAzo30 | Transposase |
| FE249_RS19855 (FE249_19725) | 60525..62987 | + | 2463 | WP_241420111.1 | phosphoketolase family protein | - |
| FE249_RS19860 (FE249_19730) | 63198..63590 | + | 393 | WP_241420112.1 | TetR family transcriptional regulator | - |
| FE249_RS19865 (FE249_19735) | 63796..64389 | + | 594 | WP_241420113.1 | DUF2867 domain-containing protein | - |
| FE249_RS19870 (FE249_19745) | 64971..65384 | - | 414 | WP_231295208.1 | WGR domain-containing protein | - |
| FE249_RS19875 (FE249_19750) | 65851..66234 | + | 384 | WP_043508904.1 | IS21 family transposase ISPpu7 | Transposase |
| FE249_RS19880 (FE249_19755) | 66751..66957 | - | 207 | Protein_75 | GDP-mannose 4,6-dehydratase | - |
| FE249_RS19885 (FE249_19760) | 67109..68824 | - | 1716 | WP_011930662.1 | ubiquinone-dependent pyruvate dehydrogenase | - |
| FE249_RS19890 (FE249_19765) | 68838..70466 | - | 1629 | WP_011930661.1 | FMN-binding glutamate synthase family protein | - |
| FE249_RS19895 (FE249_19770) | 71056..71922 | + | 867 | WP_011930660.1 | MipA/OmpV family protein | - |
| FE249_RS19900 (FE249_19775) | 72001..72200 | + | 200 | Protein_79 | IS5 family transposase ISPso2 | Transposase |
| FE249_RS19905 (FE249_19780) | 72334..72764 | + | 431 | Protein_80 | IS5 family transposase ISRm4 | Transposase |
| FE249_RS19910 (FE249_19785) | 72833..73588 | - | 756 | WP_241420116.1 | hypothetical protein | - |
| FE249_RS19915 (FE249_19790) | 73784..75283 | + | 1500 | WP_241418399.1 | IS21 family transposase ISMex8 | Transposase |
| FE249_RS19920 (FE249_19795) | 75280..76107 | + | 828 | WP_241418400.1 | IS21 family transposase ISMex8 | Transposase |
| FE249_RS19925 (FE249_19800) | 76251..76622 | + | 372 | WP_035187691.1 | helix-turn-helix domain-containing protein | - |
| FE249_RS19930 (FE249_19805) | 76974..77876 | - | 903 | WP_241420027.1 | HTH-type transcriptional regulator DmlR | VF |
| FE249_RS19935 (FE249_19810) | 77988..78398 | + | 411 | WP_241420028.1 | nuclear transport factor 2 family protein | - |
| FE249_RS19940 (FE249_19815) | 78448..78993 | + | 546 | WP_241420029.1 | DUF2867 domain-containing protein | - |
| FE249_RS19945 (FE249_19820) | 79180..79863 | + | 684 | WP_241420030.1 | IS6 family transposase ISPko6 | Transposase |
| FE249_RS19950 (FE249_19825) | 79917..80123 | - | 207 | Protein_89 | IS91 family transposase ISAzo26 | Transposase |
| FE249_RS19955 (FE249_19830) | 80133..80378 | - | 246 | Protein_90 | Tyrosine recombinase XerD | VF |
| FE249_RS19960 (FE249_19835) | 80428..81651 | - | 1224 | WP_241420031.1 | IS256 family transposase ISSpwi2 | Transposase |
| FE249_RS19965 (FE249_19840) | 81761..81973 | - | 213 | WP_241420117.1 | hypothetical protein | - |
| FE249_RS19970 (FE249_19845) | 82522..83154 | - | 633 | Protein_93 | IS3 family transposase ISMamg1 | Transposase |
| FE249_RS19975 (FE249_19850) | 83188..84508 | - | 1321 | Protein_94 | IS256 family transposase ISOan9 | Transposase |
| FE249_RS19980 (FE249_19855) | 84556..84843 | - | 288 | Protein_95 | IS3 family transposase | - |
| FE249_RS19985 (FE249_19860) | 84919..85968 | + | 1050 | Protein_96 | IS110 family transposase ISMmg1 | Transposase |
| FE249_RS19990 (FE249_19865) | 86233..86481 | - | 249 | Protein_97 | IS3 family transposase ISMamg1 | Transposase |
| FE249_RS19995 (FE249_19870) | 86597..86890 | + | 294 | WP_241420032.1 | putative signaling protein | VF |
| FE249_RS20000 (FE249_19875) | 87012..87131 | - | 120 | Protein_99 | IS630 family transposase | - |
| FE249_RS20005 (FE249_19880) | 87449..88681 | - | 1233 | WP_241420033.1 | hypothetical protein | VF |
| FE249_RS20010 (FE249_19885) | 88950..90065 | - | 1116 | WP_241420034.1 | hypothetical protein | - |
| FE249_RS20015 (FE249_19890) | 90151..90942 | + | 792 | WP_241420035.1 | hypothetical protein | - |
| FE249_RS20020 (FE249_19895) | 91154..92281 | + | 1128 | WP_241420036.1 | Tn3 family transposase TnpR_TnXo19 | Transposase |
| FE249_RS20025 (FE249_19900) | 92296..92784 | - | 489 | WP_241420037.1 | RES family NAD+ phosphorylase | Toxin Detail |
| FE249_RS20030 (FE249_19905) | 92781..93356 | - | 576 | WP_241420038.1 | DUF2384 domain-containing protein | Antitoxin Detail |
| FE249_RS20035 (FE249_19910) | 93507..93971 | + | 465 | WP_241420039.1 | hypothetical protein | - |
| FE249_RS20040 (FE249_19915) | 94122..94739 | + | 618 | WP_241420040.1 | ATP-binding protein | - |
| FE249_RS20045 (FE249_19920) | 95398..96060 | + | 663 | WP_011930611.1 | Chromosome-partitioning ATPase Soj | VF |
| FE249_RS20050 (FE249_19925) | 96888..97823 | + | 936 | WP_241420041.1 | replication protein RepA | - |
| FE249_RS20055 | 98145..98282 | + | 138 | WP_174501999.1 | hypothetical protein | - |
| FE249_RS20060 (FE249_19930) | 98906..99952 | - | 1047 | WP_241420042.1 | hypothetical protein | - |
| FE249_RS20065 (FE249_19935) | 99983..101173 | - | 1191 | WP_241420043.1 | DEAD/DEAH box helicase | - |
| FE249_RS20070 (FE249_19940) | 101243..101893 | - | 651 | WP_241420044.1 | hypothetical protein | - |
| FE249_RS20075 (FE249_19945) | 101887..103173 | - | 1287 | WP_241420045.1 | hypothetical protein | - |
| FE249_RS20080 (FE249_19950) | 103372..103749 | + | 378 | WP_011930606.1 | hypothetical protein | - |
| FE249_RS20085 (FE249_19955) | 103893..104453 | + | 561 | WP_241420046.1 | DUF4168 domain-containing protein | - |
| FE249_RS20090 (FE249_19960) | 104648..105016 | + | 369 | WP_241420047.1 | hypothetical protein | - |
| FE249_RS20095 (FE249_19965) | 105131..105475 | - | 345 | WP_241420048.1 | hypothetical protein | VF |
| FE249_RS20100 (FE249_19970) | 105567..107066 | + | 1500 | WP_241420049.1 | IS21 family transposase ISMex8 | Transposase |
| FE249_RS20105 (FE249_19975) | 107063..107890 | + | 828 | WP_241420050.1 | IS21 family transposase ISMex8 | Transposase |
| FE249_RS20110 | 107877..108497 | - | 621 | WP_241420051.1 | IS200-IS605 family transposase ISMdi15 | Transposase |
| FE249_RS20115 (FE249_19985) | 108521..108937 | + | 417 | WP_011930739.1 | IS200-IS605 family transposase ISSoc3 | Transposase |
| FE249_RS20120 (FE249_19990) | 109023..111119 | - | 2097 | WP_241420052.1 | ATP-dependent helicase | - |
| FE249_RS20125 (FE249_19995) | 111483..112262 | + | 780 | WP_231295219.1 | ImuA family protein | - |
| FE249_RS20130 (FE249_20000) | 112237..113700 | + | 1464 | WP_241420053.1 | DNA polymerase Y family protein | - |
| FE249_RS20135 (FE249_20005) | 113697..116945 | + | 3249 | WP_241420054.1 | error-prone DNA polymerase | - |
| FE249_RS20140 (FE249_20010) | 117266..118174 | + | 909 | Protein_127 | IS91 family transposase ISMno24 | Transposase |
| FE249_RS20145 (FE249_20015) | 118179..119372 | + | 1194 | WP_241420055.1 | IS91 family transposase ISMno24 | Transposase |
| FE249_RS20150 (FE249_20020) | 120211..121005 | + | 795 | WP_241420056.1 | hypothetical protein | - |
| FE249_RS20155 (FE249_20025) | 121500..121823 | + | 324 | WP_241418387.1 | IS66 family transposase ISAli15 | Transposase |
| FE249_RS20160 (FE249_20030) | 121820..122167 | + | 348 | WP_035189610.1 | IS66 family transposase ISAzs18 | Transposase |
| FE249_RS20165 (FE249_20035) | 122225..123811 | + | 1587 | WP_162839083.1 | IS66 family transposase ISAzca2 | Transposase |
| FE249_RS20170 (FE249_20040) | 123840..125297 | - | 1458 | WP_241420057.1 | phospholipase D-like domain-containing protein | - |
| FE249_RS20175 (FE249_20045) | 125294..127708 | - | 2415 | WP_241420058.1 | AAA domain-containing protein | - |
| FE249_RS20180 (FE249_20050) | 127737..128963 | + | 1227 | Protein_135 | IS256 family transposase ISOan9 | Transposase |
| FE249_RS20185 | 129455..130006 | - | 552 | Protein_136 | hypothetical protein | - |
| FE249_RS20190 (FE249_20060) | 130927..132306 | - | 1380 | WP_241420059.1 | plasmid replication protein RepC | - |
| FE249_RS20195 (FE249_20065) | 132489..132701 | - | 213 | WP_241420060.1 | hypothetical protein | - |
| FE249_RS20200 (FE249_20070) | 132958..133704 | - | 747 | WP_241420061.1 | hypothetical protein | - |
| FE249_RS20205 (FE249_20075) | 133676..133966 | - | 291 | WP_241420062.1 | hypothetical protein | - |
| FE249_RS20210 (FE249_20080) | 133973..134245 | - | 273 | WP_241420063.1 | hypothetical protein | - |
| FE249_RS20215 (FE249_20085) | 134242..134781 | - | 540 | WP_241420064.1 | hypothetical protein | - |
| FE249_RS20220 (FE249_20090) | 134861..135130 | - | 270 | WP_241420065.1 | hypothetical protein | - |
| FE249_RS20225 (FE249_20095) | 135302..135625 | + | 324 | WP_241420066.1 | hypothetical protein | - |
| FE249_RS20230 (FE249_20100) | 135699..138377 | + | 2679 | WP_241420067.1 | CRISPR-associated helicase Cas3' | - |
| FE249_RS20235 (FE249_20105) | 138790..140226 | + | 1437 | WP_241418987.1 | IS66 family transposase ISRhru2 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|