MGE detailed information
MGE type: Conjugative plasmid MGE length: 88891 bp
Accession: NZ_CP041679 Location: 1..88891 Organism: Escherichia coli strain ESBL 15 Replicon: plasmid unnamed1
Accession: NZ_CP041679 Location: 1..88891 Organism: Escherichia coli strain ESBL 15 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FOA56_RS24785 () | 1..1032 | + | 1032 | WP_000907863.1 | replication initiation protein | - |
| FOA56_RS24800 () | 2101..2610 | - | 510 | WP_032330250.1 | hypothetical protein | - |
| FOA56_RS24805 () | 2666..3268 | - | 603 | WP_000517692.1 | hypothetical protein | - |
| FOA56_RS24815 () | 3622..4968 | + | 1347 | WP_096949734.1 | hypothetical protein | - |
| FOA56_RS24825 () | 5247..7127 | + | 1881 | WP_052971876.1 | colicin | - |
| FOA56_RS24830 () | 7149..7485 | - | 337 | Protein_5 | colicin 1A immunity protein | - |
| FOA56_RS24835 () | 7614..7865 | + | 252 | Protein_6 | hypothetical protein | - |
| FOA56_RS24840 () | 7879..8211 | + | 333 | WP_064754192.1 | WbuC family cupin fold metalloprotein | - |
| FOA56_RS24845 () | 8258..9133 | - | 876 | WP_013188473.1 | Beta-lactamase CTX-M-1 | ARG |
| FOA56_RS24850 () | 9421..10683 | - | 1263 | Protein_9 | IS1380 family transposase ISEcp1 | Transposase |
| FOA56_RS24855 () | 10989..11579 | - | 591 | WP_000194576.1 | hypothetical protein | - |
| FOA56_RS24860 () | 11579..11836 | - | 258 | WP_000343085.1 | hypothetical protein | - |
| FOA56_RS24870 () | 12404..12817 | + | 414 | WP_032330007.1 | hypothetical protein | - |
| FOA56_RS24875 () | 12819..13598 | + | 780 | WP_032330009.1 | site-specific integrase | - |
| FOA56_RS24880 () | 13778..14422 | + | 645 | WP_001144036.1 | ParA family protein | - |
| FOA56_RS24885 () | 14509..14817 | + | 309 | WP_000030199.1 | hypothetical protein | - |
| FOA56_RS24890 () | 15231..16211 | + | 981 | WP_000688514.1 | plasmid segregation protein ParM | - |
| FOA56_RS24895 () | 16204..16620 | + | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| FOA56_RS24900 () | 16622..17896 | - | 1275 | WP_000457524.1 | Y-family DNA polymerase | - |
| FOA56_RS24905 () | 17896..18333 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| FOA56_RS24910 () | 18330..18578 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| FOA56_RS24920 () | 18996..19898 | + | 903 | WP_134089490.1 | DUF1281 domain-containing protein | - |
| FOA56_RS24925 () | 19895..20206 | + | 312 | WP_031942433.1 | hypothetical protein | - |
| FOA56_RS24930 () | 20282..20965 | + | 684 | WP_000086147.1 | DNA methylase | - |
| FOA56_RS24935 () | 20966..21187 | + | 222 | WP_001104881.1 | hypothetical protein | - |
| FOA56_RS24940 () | 21201..21635 | + | 435 | WP_000274500.1 | DUF1380 family protein | - |
| FOA56_RS25860 () | 21681..22457 | + | 777 | WP_032330368.1 | hypothetical protein | - |
| FOA56_RS24955 () | 22998..23300 | + | 303 | WP_001671341.1 | antirestriction protein | - |
| FOA56_RS24960 () | 23347..23769 | + | 423 | WP_000271763.1 | DUF1380 family protein | - |
| FOA56_RS24965 () | 23766..23957 | + | 192 | WP_001027493.1 | hypothetical protein | - |
| FOA56_RS25865 () | 24291..24359 | - | 69 | Protein_30 | pilus protein | - |
| FOA56_RS24980 () | 24728..25255 | + | 528 | WP_001276114.1 | single-stranded DNA-binding protein | - |
| FOA56_RS24985 () | 25313..25546 | + | 234 | WP_000006012.1 | DUF905 family protein | - |
| FOA56_RS24990 () | 25605..27563 | + | 1959 | WP_032329756.1 | ParB/RepB/Spo0J family partition protein | - |
| FOA56_RS24995 () | 27618..28052 | + | 435 | WP_000845897.1 | conjugation system SOS inhibitor PsiB | - |
| FOA56_RS25000 () | 28049..28768 | + | 720 | WP_001276263.1 | plasmid SOS inhibition protein A | - |
| FOA56_RS25005 () | 28765..29361 | + | 597 | WP_000978012.1 | hypothetical protein | - |
| FOA56_RS25015 () | 29824..30324 | + | 501 | WP_000117622.1 | antirestriction protein ArdA | - |
| FOA56_RS25025 () | 31060..31494 | + | 435 | WP_000218863.1 | hypothetical protein | - |
| FOA56_RS25030 () | 31586..31852 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| FOA56_RS25035 () | 31917..32855 | + | 939 | WP_000038336.1 | Recombination-promoting nuclease RpnA | VF |
| FOA56_RS25040 () | 32855..33100 | + | 246 | WP_001260884.1 | hypothetical protein | - |
| FOA56_RS25045 () | 33131..33382 | - | 252 | WP_000148286.1 | helix-turn-helix domain-containing protein | - |
| FOA56_RS25870 () | 33416..33613 | - | 198 | WP_024129998.1 | hypothetical protein | - |
| FOA56_RS25060 () | 33962..34810 | + | 849 | WP_001077033.1 | DUF4942 domain-containing protein | - |
| FOA56_RS25065 () | 34896..35231 | - | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| FOA56_RS25070 () | 35465..35797 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| FOA56_RS25075 () | 35808..38507 | + | 2700 | WP_032329268.1 | Protein TraI | Relaxase |
| FOA56_RS25080 () | 38544..40835 | - | 2292 | WP_001289276.1 | hypothetical protein | - |
| FOA56_RS25085 () | 40828..41898 | - | 1071 | WP_000151583.1 | IncI1-type conjugal transfer protein TrbB | - |
| FOA56_RS25090 () | 41917..43125 | - | 1209 | WP_016245570.1 | IncI1-type conjugal transfer protein TrbA | - |
| - () | 43305..43362 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - () | 43305..43362 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - () | 43305..43362 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - () | 43305..43362 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| FOA56_RS25095 () | 43417..43569 | + | 153 | WP_001331364.1 | Hok/Gef family protein | Toxin Detail |
| FOA56_RS25100 () | 43641..43892 | - | 252 | WP_032329894.1 | hypothetical protein | - |
| FOA56_RS25615 () | 44551..44727 | - | 177 | WP_001054897.1 | hypothetical protein | - |
| FOA56_RS25105 () | 45119..45328 | + | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| FOA56_RS25110 () | 45400..46050 | - | 651 | WP_001178506.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| FOA56_RS25115 () | 46124..48286 | - | 2163 | WP_149617733.1 | DotA/TraY family protein | - |
| FOA56_RS25120 () | 48383..48967 | - | 585 | WP_001037982.1 | IncI1-type conjugal transfer protein TraX | - |
| FOA56_RS25125 () | 48996..50198 | - | 1203 | WP_001189160.1 | IncI1-type conjugal transfer protein TraW | - |
| FOA56_RS25130 () | 50165..50779 | - | 615 | WP_000337399.1 | IncI1-type conjugal transfer protein TraV | - |
| FOA56_RS25135 () | 50779..53823 | - | 3045 | WP_001024782.1 | IncI1-type conjugal transfer protein TraU | - |
| FOA56_RS25140 () | 53913..54713 | - | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| FOA56_RS25145 () | 54697..54885 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| FOA56_RS25150 () | 54949..55353 | - | 405 | WP_000086959.1 | IncI1-type conjugal transfer protein TraR | - |
| FOA56_RS25155 () | 55404..55931 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| FOA56_RS25160 () | 55931..56635 | - | 705 | WP_000801919.1 | IncI1-type conjugal transfer protein TraP | - |
| FOA56_RS25165 () | 56635..57924 | - | 1290 | WP_032330003.1 | conjugal transfer protein TraO | - |
| FOA56_RS25170 () | 57927..58910 | - | 984 | WP_001191877.1 | hypothetical protein | VF |
| FOA56_RS25175 () | 58921..59613 | - | 693 | WP_000138550.1 | DotI/IcmL family type IV secretion protein | - |
| FOA56_RS25180 () | 59610..59957 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| FOA56_RS25185 () | 59975..63742 | - | 3768 | WP_096949733.1 | DNA primase | - |
| FOA56_RS25190 () | 63832..64383 | - | 552 | WP_000014583.1 | Phospholipase D | VF |
| FOA56_RS25195 () | 64398..64688 | - | 291 | WP_001299214.1 | hypothetical protein | - |
| FOA56_RS25200 () | 64685..65833 | - | 1149 | WP_001024972.1 | putative protein YggR | VF |
| FOA56_RS25205 () | 65830..66648 | - | 819 | WP_000646098.1 | hypothetical protein | VF |
| FOA56_RS25210 () | 66645..67103 | - | 459 | WP_001079808.1 | hypothetical protein | VF |
| FOA56_RS25215 () | 67498..68082 | - | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| FOA56_RS25220 () | 68142..69344 | - | 1203 | WP_000976351.1 | conjugal transfer protein TraF | - |
| FOA56_RS25225 () | 69429..70253 | - | 825 | WP_001238939.1 | hypothetical protein | - |
| FOA56_RS25230 () | 70404..71558 | - | 1155 | WP_001139957.1 | integrase | - |
| FOA56_RS25240 () | 72251..72499 | + | 249 | WP_001349157.1 | hypothetical protein | - |
| FOA56_RS25245 () | 72496..73788 | - | 1293 | WP_001417545.1 | hypothetical protein | VF |
| FOA56_RS25250 () | 73788..74444 | - | 657 | WP_001193553.1 | hypothetical protein | VF |
| FOA56_RS25255 () | 74429..74989 | - | 561 | WP_000014116.1 | hypothetical protein | VF |
| FOA56_RS25260 () | 74999..75613 | - | 615 | WP_000959785.1 | hypothetical protein | VF |
| FOA56_RS25265 () | 75631..76728 | - | 1098 | WP_001208805.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| FOA56_RS25270 () | 76741..78294 | - | 1554 | WP_000362202.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| FOA56_RS25275 () | 78305..78757 | - | 453 | WP_001247336.1 | hypothetical protein | VF |
| FOA56_RS25280 () | 78744..80039 | - | 1296 | WP_021560540.1 | hypothetical protein | VF |
| FOA56_RS25285 () | 80032..81714 | - | 1683 | WP_096949736.1 | Outer membrane lipoprotein BfpB | VF |
| FOA56_RS25290 () | 81728..82165 | - | 438 | WP_000539807.1 | hypothetical protein | VF |
| FOA56_RS25295 () | 82165..83232 | - | 1068 | WP_001302629.1 | hypothetical protein | VF |
| FOA56_RS25305 () | 83906..84358 | - | 453 | WP_000008894.1 | hypothetical protein | - |
| FOA56_RS25310 () | 84401..84655 | - | 255 | WP_001136192.1 | PilI type IV pilus biogenesis protein | - |
| FOA56_RS25320 () | 84817..85368 | - | 552 | WP_000744644.1 | hypothetical protein | - |
| FOA56_RS25325 () | 85541..86224 | - | 684 | WP_000213859.1 | conjugal transfer protein TraC | - |
| FOA56_RS25330 () | 86477..87010 | - | 534 | WP_001306770.1 | transcription termination factor NusG | - |
| FOA56_RS25340 () | 87452..87739 | - | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| FOA56_RS25345 () | 87657..87920 | - | 264 | WP_001324596.1 | ash family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|