MGE detailed information
MGE type: Conjugative plasmid MGE length: 121851 bp
Accession: NZ_CP041642 Location: 1..121851 Organism: Klebsiella pneumoniae strain PIMB15ND2KP27 Replicon: plasmid pKP27-NDM4
Accession: NZ_CP041642 Location: 1..121851 Organism: Klebsiella pneumoniae strain PIMB15ND2KP27 Replicon: plasmid pKP27-NDM4
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DIJ67_RS28375 () | 1..159 | + | 159 | WP_014343509.1 | type I toxin-antitoxin system Hok family toxin | - |
| DIJ67_RS28385 () | 853..1125 | + | 273 | WP_023287105.1 | hypothetical protein | - |
| DIJ67_RS28390 () | 1122..1472 | + | 351 | WP_023287104.1 | hypothetical protein | - |
| DIJ67_RS28405 () | 2104..2460 | + | 357 | WP_019706019.1 | hypothetical protein | - |
| DIJ67_RS28410 () | 2521..2733 | + | 213 | WP_019706020.1 | hypothetical protein | - |
| DIJ67_RS28415 () | 2744..2968 | + | 225 | WP_014343499.1 | hypothetical protein | - |
| DIJ67_RS28420 () | 3049..3369 | + | 321 | WP_004152720.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| DIJ67_RS28425 () | 3359..3637 | + | 279 | WP_004152721.1 | helix-turn-helix domain-containing protein | - |
| DIJ67_RS28430 () | 3638..4051 | + | 414 | WP_069985713.1 | helix-turn-helix domain-containing protein | - |
| DIJ67_RS28440 () | 4881..5702 | + | 822 | WP_146326667.1 | DUF945 domain-containing protein | - |
| DIJ67_RS28445 () | 5735..6064 | + | 330 | WP_071994324.1 | hypothetical protein | - |
| DIJ67_RS28450 () | 6097..6582 | - | 486 | WP_032440470.1 | hypothetical protein | VF |
| DIJ67_RS28455 () | 7014..7406 | + | 393 | WP_004194114.1 | relaxosome protein TraM | - |
| DIJ67_RS28460 () | 7636..8337 | + | 702 | WP_004194113.1 | hypothetical protein | - |
| DIJ67_RS28465 () | 8423..8623 | + | 201 | WP_004194116.1 | TraY domain-containing protein | - |
| DIJ67_RS28470 () | 8692..9060 | + | 369 | WP_004194426.1 | type IV conjugative transfer system pilin TraA | - |
| DIJ67_RS28475 () | 9074..9379 | + | 306 | WP_004144424.1 | type IV conjugative transfer system protein TraL | - |
| DIJ67_RS28480 () | 9399..9965 | + | 567 | WP_004152602.1 | type IV conjugative transfer system protein TraE | - |
| DIJ67_RS28485 () | 9952..10692 | + | 741 | WP_146326669.1 | type-F conjugative transfer system secretin TraK | - |
| DIJ67_RS28490 () | 10692..12116 | + | 1425 | WP_004194260.1 | conjugal transfer protein TraB | - |
| DIJ67_RS28495 () | 12189..12773 | + | 585 | WP_032440547.1 | type IV conjugative transfer system lipoprotein TraV | - |
| DIJ67_RS28500 () | 13096..13314 | + | 219 | WP_004195468.1 | hypothetical protein | - |
| DIJ67_RS28505 () | 13315..13626 | + | 312 | WP_014386200.1 | hypothetical protein | - |
| DIJ67_RS28510 () | 13693..14097 | + | 405 | WP_004197817.1 | hypothetical protein | - |
| DIJ67_RS28520 () | 14476..14874 | + | 399 | WP_023179972.1 | hypothetical protein | - |
| DIJ67_RS28525 () | 14946..17585 | + | 2640 | WP_013214024.1 | type IV secretion system protein TraC | - |
| DIJ67_RS28530 () | 17585..17974 | + | 390 | WP_004167468.1 | type-F conjugative transfer system protein TrbI | - |
| DIJ67_RS28535 () | 17974..18609 | + | 636 | WP_029497419.1 | type-F conjugative transfer system protein TraW | - |
| DIJ67_RS28540 () | 18644..19045 | + | 402 | WP_004194979.1 | hypothetical protein | - |
| DIJ67_RS28545 () | 19042..20031 | + | 990 | WP_013214027.1 | conjugal transfer pilus assembly protein TraU | - |
| DIJ67_RS28550 () | 20044..20682 | + | 639 | WP_069985712.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| DIJ67_RS28555 () | 20741..22696 | + | 1956 | WP_146326671.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| DIJ67_RS28560 () | 22728..22982 | + | 255 | WP_004152674.1 | conjugal transfer protein TrbE | - |
| DIJ67_RS28565 () | 22960..23208 | + | 249 | WP_004152675.1 | hypothetical protein | - |
| DIJ67_RS28570 () | 23221..23547 | + | 327 | WP_013214030.1 | hypothetical protein | - |
| DIJ67_RS28575 () | 23568..24320 | + | 753 | WP_004152677.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| DIJ67_RS28580 () | 24331..24570 | + | 240 | WP_004144400.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| DIJ67_RS28585 () | 24542..25099 | + | 558 | WP_013214031.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| DIJ67_RS28590 () | 25145..25588 | + | 444 | WP_004152679.1 | F-type conjugal transfer protein TrbF | - |
| DIJ67_RS28595 () | 25566..26945 | + | 1380 | WP_186725999.1 | conjugal transfer protein TraH | - |
| DIJ67_RS28600 () | 26945..29794 | + | 2850 | WP_146326676.1 | conjugal transfer mating pair stabilization protein TraG | - |
| DIJ67_RS28605 () | 29807..30355 | + | 549 | WP_004152623.1 | conjugal transfer entry exclusion protein TraS | - |
| DIJ67_RS28610 () | 30539..31270 | + | 732 | WP_004152622.1 | complement resistance protein TraT | - |
| DIJ67_RS29740 () | 31462..32151 | + | 690 | WP_004198206.1 | hypothetical protein | - |
| DIJ67_RS28620 () | 32280..34592 | + | 2313 | Protein_44 | type IV conjugative transfer system coupling protein TraD | - |
| DIJ67_RS28625 () | 34592..39853 | + | 5262 | WP_146326680.1 | Multifunctional conjugation protein TraI | Relaxase |
| DIJ67_RS28630 () | 39898..40623 | + | 726 | WP_117114905.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| DIJ67_RS28635 () | 40695..41288 | + | 594 | WP_004152380.1 | fertility inhibition protein FinO | - |
| DIJ67_RS28640 () | 41449..42051 | + | 603 | WP_015060010.1 | hypothetical protein | - |
| DIJ67_RS28645 () | 42101..42745 | + | 645 | WP_004153014.1 | hypothetical protein | - |
| DIJ67_RS28650 () | 42801..43451 | + | 651 | WP_064162930.1 | DUF2726 domain-containing protein | - |
| DIJ67_RS28655 () | 43448..43756 | + | 309 | WP_004152383.1 | hypothetical protein | - |
| DIJ67_RS28660 () | 43932..44411 | + | 480 | WP_014343478.1 | Phospholipase D | VF |
| DIJ67_RS28665 () | 44529..44798 | + | 270 | WP_013609506.1 | replication regulatory protein RepA | - |
| DIJ67_RS28670 () | 45030..45107 | + | 78 | WP_004171450.1 | RepA leader peptide Tap | - |
| DIJ67_RS28675 () | 45100..45957 | + | 858 | WP_004152386.1 | incFII family plasmid replication initiator RepA | - |
| DIJ67_RS28685 () | 47001..47336 | - | 336 | WP_011977766.1 | C2H2-type zinc finger protein | - |
| DIJ67_RS28690 () | 47509..47790 | + | 282 | WP_001568067.1 | hypothetical protein | - |
| DIJ67_RS28695 () | 47844..48455 | + | 612 | WP_000176305.1 | DUF2913 family protein | - |
| DIJ67_RS29745 () | 48452..48562 | - | 111 | Protein_59 | Rpn family recombination-promoting nuclease/putative transposase | - |
| DIJ67_RS28700 () | 48604..48714 | - | 111 | Protein_60 | IS6 family transposase | - |
| DIJ67_RS28705 () | 48748..51645 | - | 2898 | WP_001553819.1 | Tn3 family transposase TnpA_Tn5403 | Transposase |
| DIJ67_RS28710 () | 51740..52345 | + | 606 | WP_000509966.1 | Tn3 family transposase TnpR_Tn5403 | Transposase |
| DIJ67_RS28715 () | 52381..52449 | - | 69 | Protein_63 | IS6 family transposase | - |
| DIJ67_RS28720 () | 52895..53809 | + | 915 | Protein_64 | IS30 family transposase ISAba125 | Transposase |
| DIJ67_RS28725 () | 53866..54570 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| DIJ67_RS28730 () | 54625..54825 | + | 201 | Protein_66 | hypothetical protein | - |
| DIJ67_RS28740 () | 55036..56565 | - | 1530 | WP_015056392.1 | IS91 family transposase ISVsa3 | Transposase |
| DIJ67_RS28745 () | 56754..58394 | - | 1641 | WP_004201176.1 | 60 kDa chaperonin | VF |
| DIJ67_RS28750 () | 58450..58740 | - | 291 | WP_004201172.1 | co-chaperone GroES | - |
| DIJ67_RS28755 () | 58934..59263 | + | 330 | WP_004201171.1 | divalent-cation tolerance protein CutA | - |
| DIJ67_RS28760 () | 59268..60299 | + | 1032 | WP_004201169.1 | protein-disulfide reductase DsbD N-terminal domain-containing protein | - |
| DIJ67_RS28765 () | 60310..60948 | - | 639 | WP_004201168.1 | phosphoribosylanthranilate isomerase | - |
| DIJ67_RS28770 () | 60953..61318 | - | 366 | WP_004201167.1 | bleomycin binding protein Ble-MBL | - |
| DIJ67_RS28775 () | 61322..62134 | - | 813 | WP_063860861.1 | Metallo-beta-lactamase type 2 | ARG |
| DIJ67_RS28780 () | 62235..62360 | - | 126 | Protein_75 | IS30 family transposase | - |
| DIJ67_RS28785 () | 62413..63117 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| DIJ67_RS28795 () | 63181..64368 | - | 1188 | Protein_77 | Tn3 family transposase TnpA_Tn3 | Transposase |
| DIJ67_RS28805 () | 64421..65125 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| DIJ67_RS28810 () | 65162..66289 | - | 1128 | WP_014837927.1 | DUF3883 domain-containing protein | - |
| DIJ67_RS28815 () | 66340..66567 | - | 228 | WP_000248278.1 | hypothetical protein | - |
| DIJ67_RS28820 () | 66591..66782 | + | 192 | WP_000951934.1 | hypothetical protein | - |
| DIJ67_RS28825 () | 67264..67806 | - | 543 | WP_000587837.1 | AAA family ATPase | - |
| DIJ67_RS28830 () | 67819..68679 | - | 861 | WP_000557454.1 | SPBc2 prophage-derived aminoglycoside N(3')-acetyltransferase-like protein YokD | ARG |
| DIJ67_RS28840 () | 68822..69049 | + | 228 | Protein_84 | IS4 family transposase | - |
| DIJ67_RS28845 () | 69102..70070 | - | 969 | WP_000654812.1 | IS5 family transposase IS903B | Transposase |
| DIJ67_RS28850 () | 70105..70980 | - | 876 | WP_001617865.1 | Beta-lactamase CTX-M-97 | ARG |
| DIJ67_RS28855 () | 71301..71998 | + | 698 | Protein_87 | IS1 family transposase ISKpn14 | Transposase |
| DIJ67_RS28860 () | 72013..72411 | - | 399 | Protein_88 | serine hydrolase | - |
| DIJ67_RS28865 () | 72594..72911 | - | 318 | Protein_89 | Tn3 family transposase TnpR_Tn3 | Transposase |
| DIJ67_RS28870 () | 73111..73935 | - | 825 | Protein_90 | class D beta-lactamase | - |
| DIJ67_RS28875 () | 73995..74783 | - | 789 | WP_001206315.1 | Streptomycin 3''-adenylyltransferase | ARG |
| DIJ67_RS28880 () | 74853..75407 | - | 555 | WP_063840280.1 | Aminoglycoside N(6')-acetyltransferase type 1 | ARG |
| DIJ67_RS28885 () | 75641..76198 | - | 558 | WP_001217881.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| DIJ67_RS28895 () | 76502..77206 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| DIJ67_RS28900 () | 77212..78630 | + | 1419 | WP_017901399.1 | cell division protein FtsI | - |
| DIJ67_RS28905 () | 78695..79552 | + | 858 | WP_012477595.1 | Beta-lactamase TEM | ARG |
| DIJ67_RS28910 () | 79601..80754 | - | 1154 | Protein_97 | IS3 family transposase ISAs17 | Transposase |
| DIJ67_RS28915 () | 81149..81805 | + | 657 | WP_001516695.1 | Pentapeptide repeat protein | ARG |
| DIJ67_RS28920 () | 82124..82489 | - | 366 | WP_094860197.1 | Tn3 family transposase TnpR_ISMex22 | Transposase |
| DIJ67_RS28925 () | 82425..83816 | - | 1392 | WP_001493761.1 | ISKra4 family transposase ISKpn19 | Transposase |
| DIJ67_RS28930 () | 83853..84425 | - | 573 | WP_001493762.1 | Tn3 family transposase TnpR_ISPa40 | Transposase |
| DIJ67_RS28935 () | 84562..85152 | - | 591 | WP_012477564.1 | plasmid pRiA4b ORF-3 family protein | - |
| DIJ67_RS28940 () | 85588..85944 | - | 357 | WP_000215515.1 | cupin domain-containing protein | - |
| DIJ67_RS28945 () | 85934..86335 | - | 402 | WP_001293886.1 | DUF86 domain-containing protein | - |
| DIJ67_RS28950 () | 86332..86622 | - | 291 | WP_001247892.1 | nucleotidyltransferase | - |
| DIJ67_RS28955 () | 86697..89663 | + | 2967 | WP_146326682.1 | Tn3 family transposase TnpA_ISPa38 | Transposase |
| DIJ67_RS28960 () | 89742..90746 | + | 1005 | WP_087497908.1 | IS110 family transposase IS4321R | Transposase |
| DIJ67_RS28965 () | 90928..91131 | - | 204 | WP_004197809.1 | hypothetical protein | - |
| DIJ67_RS28970 () | 91145..91348 | - | 204 | WP_004197808.1 | hemolysin expression modulator Hha | - |
| DIJ67_RS28975 () | 91382..91750 | - | 369 | WP_004197807.1 | hypothetical protein | - |
| DIJ67_RS28980 () | 91794..92288 | - | 495 | WP_044816180.1 | hypothetical protein | - |
| DIJ67_RS28985 () | 92319..92891 | - | 573 | WP_020805590.1 | hypothetical protein | - |
| DIJ67_RS28990 () | 92888..93136 | - | 249 | WP_000272716.1 | hypothetical protein | - |
| DIJ67_RS28995 () | 93573..94262 | + | 690 | WP_020315560.1 | RES family NAD+ phosphorylase | - |
| DIJ67_RS29000 () | 94294..94983 | - | 690 | WP_004193995.1 | hypothetical protein | - |
| DIJ67_RS29015 () | 95538..95756 | + | 219 | WP_001568025.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| DIJ67_RS29020 () | 95758..96063 | + | 306 | WP_013023785.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| DIJ67_RS29025 () | 96232..96627 | + | 396 | WP_017899885.1 | hypothetical protein | - |
| DIJ67_RS29030 () | 96654..96968 | + | 315 | WP_053389906.1 | hypothetical protein | - |
| DIJ67_RS29035 () | 96979..97995 | + | 1017 | WP_017899884.1 | hypothetical protein | - |
| DIJ67_RS29040 () | 98193..98987 | + | 795 | WP_004197635.1 | site-specific integrase | - |
| DIJ67_RS29045 () | 99467..99646 | - | 180 | WP_006788217.1 | hypothetical protein | - |
| DIJ67_RS29050 () | 99766..100392 | - | 627 | WP_004197649.1 | Chromosome-partitioning ATPase Soj | VF |
| DIJ67_RS29055 () | 101032..101907 | - | 876 | WP_004197644.1 | RepB family plasmid replication initiator protein | - |
| DIJ67_RS29060 () | 102319..103590 | - | 1272 | WP_004197646.1 | Y-family DNA polymerase | - |
| DIJ67_RS29065 () | 103590..104021 | - | 432 | WP_001568036.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| DIJ67_RS29070 () | 104255..105226 | + | 972 | WP_001568038.1 | hypothetical protein | - |
| DIJ67_RS29075 () | 105229..105900 | + | 672 | WP_015345000.1 | plasmid partitioning/stability family protein | - |
| DIJ67_RS29080 () | 105963..106193 | + | 231 | WP_001568040.1 | hypothetical protein | - |
| DIJ67_RS29085 () | 106630..107331 | + | 702 | WP_004152355.1 | DNA methylase | - |
| DIJ67_RS29090 () | 107331..107552 | + | 222 | WP_001568042.1 | hypothetical protein | - |
| DIJ67_RS29095 () | 107562..107981 | + | 420 | WP_001568043.1 | DUF1380 domain-containing protein | - |
| DIJ67_RS29100 () | 108035..108802 | + | 768 | WP_025714480.1 | hypothetical protein | - |
| DIJ67_RS29105 () | 109483..109911 | + | 429 | WP_001568045.1 | antirestriction protein | - |
| DIJ67_RS29110 () | 109955..110461 | + | 507 | WP_013214014.1 | antirestriction protein ArdA | - |
| DIJ67_RS29115 () | 110504..110695 | + | 192 | WP_001568047.1 | hypothetical protein | - |
| DIJ67_RS29120 () | 110883..111137 | + | 255 | WP_032440466.1 | hypothetical protein | - |
| DIJ67_RS29125 () | 111172..111492 | + | 321 | WP_032436760.1 | hypothetical protein | - |
| DIJ67_RS29135 () | 112230..112457 | + | 228 | WP_001568050.1 | hypothetical protein | - |
| DIJ67_RS29140 () | 112549..112779 | + | 231 | WP_001568051.1 | hypothetical protein | - |
| DIJ67_RS29145 () | 112831..114186 | + | 1356 | WP_013054814.1 | DUF3560 domain-containing protein | - |
| DIJ67_RS29150 () | 114234..114797 | + | 564 | WP_004152756.1 | methyltransferase | - |
| DIJ67_RS29165 () | 115632..116174 | + | 543 | WP_014386158.1 | single-stranded DNA-binding protein | - |
| DIJ67_RS29170 () | 116223..116471 | + | 249 | WP_014386159.1 | DUF905 domain-containing protein | - |
| DIJ67_RS29175 () | 116541..118598 | + | 2058 | WP_014386160.1 | ParB/RepB/Spo0J family partition protein | - |
| DIJ67_RS29180 () | 118643..119074 | + | 432 | WP_001568057.1 | conjugation system SOS inhibitor PsiB | - |
| DIJ67_RS29185 () | 119071..119799 | + | 729 | WP_064148031.1 | plasmid SOS inhibition protein A | - |
| DIJ67_RS29190 () | 119796..120122 | + | 327 | WP_004152639.1 | hypothetical protein | - |
| DIJ67_RS29195 () | 120178..120552 | + | 375 | WP_146326684.1 | hypothetical protein | - |
| - () | 120612..120736 | + | 125 | NuclAT_0 | - | - |
| - () | 120612..120736 | + | 125 | NuclAT_0 | - | - |
| - () | 120612..120736 | + | 125 | NuclAT_0 | - | - |
| - () | 120612..120736 | + | 125 | NuclAT_0 | - | - |
| DIJ67_RS29205 () | 120736..121782 | - | 1047 | WP_087497921.1 | IS481 family transposase ISKpn28 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|