MGE detailed information
MGE type: IScluster/Tn MGE length: 17598 bp
Accession: NZ_CP041513 Location: 3844887..3862484 Organism: Shigella boydii strain KCCM 41690 Replicon: chromosome
Accession: NZ_CP041513 Location: 3844887..3862484 Organism: Shigella boydii strain KCCM 41690 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FNA65_RS20800 () | 3840933..3841522 | + | 590 | Protein_3800 | Ail/Lom family outer membrane beta-barrel protein | - |
| FNA65_RS20805 () | 3841587..3842822 | + | 1236 | WP_000216459.1 | prophage tail fiber N-terminal domain-containing protein | - |
| FNA65_RS20810 () | 3842908..3843420 | + | 513 | WP_000539253.1 | receptor recognizing protein Gp38 | - |
| FNA65_RS20815 () | 3843496..3843708 | + | 213 | WP_001114260.1 | DUF4376 domain-containing protein | - |
| FNA65_RS20820 () | 3843850..3844174 | - | 325 | Protein_3804 | YkgJ family cysteine cluster protein | - |
| FNA65_RS20830 () | 3844310..3844558 | - | 249 | WP_001217553.1 | DinI-like family protein | - |
| FNA65_RS20835 () | 3844655..3844831 | + | 177 | WP_000530012.1 | hypothetical protein | - |
| FNA65_RS20840 () | 3844887..3845584 | - | 698 | Protein_3807 | IS1 family transposase | - |
| FNA65_RS20845 () | 3845689..3846036 | - | 348 | Protein_3808 | hydrolase | - |
| FNA65_RS20850 () | 3846063..3847259 | - | 1197 | WP_000140459.1 | IS110 family transposase | - |
| FNA65_RS20855 () | 3847450..3847704 | - | 255 | WP_000891627.1 | isochorismatase family protein | - |
| FNA65_RS20860 () | 3848014..3849786 | + | 1773 | WP_001258662.1 | aspartate--tRNA ligase | - |
| FNA65_RS20865 () | 3849904..3850356 | + | 453 | WP_001300367.1 | dihydroneopterin triphosphate diphosphatase | - |
| FNA65_RS20870 () | 3850385..3851125 | + | 741 | WP_000907247.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| FNA65_RS20875 () | 3851160..3851681 | + | 522 | WP_001295503.1 | crossover junction endodeoxyribonuclease RuvC | - |
| FNA65_RS24990 () | 3851837..3851938 | - | 102 | Protein_3815 | IS1 family transposase | - |
| FNA65_RS20885 () | 3852026..3852445 | + | 420 | WP_000435414.1 | IS66 family insertion sequence hypothetical protein | - |
| FNA65_RS20890 () | 3852442..3852792 | + | 351 | WP_000623347.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| FNA65_RS20895 () | 3852823..3854415 | + | 1593 | WP_001072381.1 | IS66 family transposase | - |
| FNA65_RS20905 () | 3854708..3855835 | - | 1128 | WP_001063816.1 | IS110-like element ISSso6 family transposase | - |
| FNA65_RS20910 () | 3855967..3856266 | - | 300 | Protein_3820 | IS1 family transposase | - |
| FNA65_RS20920 () | 3857579..3858409 | + | 831 | WP_039059216.1 | DUF945 domain-containing protein | - |
| FNA65_RS20925 () | 3858491..3858970 | + | 480 | WP_000860059.1 | antirestriction protein | - |
| FNA65_RS20930 () | 3858986..3859462 | + | 477 | WP_012421636.1 | RadC family protein | - |
| FNA65_RS20935 () | 3859525..3859746 | + | 222 | WP_000692323.1 | DUF987 domain-containing protein | - |
| FNA65_RS20940 () | 3859820..3860188 | + | 369 | WP_001285585.1 | type IV toxin-antitoxin system toxin CbtA | Antitoxin Detail |
| FNA65_RS20945 () | 3860277..3860651 | + | 375 | WP_000854814.1 | type IV toxin-antitoxin system toxin CbtA | Toxin Detail |
| FNA65_RS20950 () | 3860648..3860842 | + | 195 | WP_000988600.1 | hypothetical protein | - |
| FNA65_RS20955 () | 3860855..3860968 | + | 114 | WP_001161660.1 | DUF957 domain-containing protein | - |
| FNA65_RS20960 () | 3861357..3862484 | + | 1128 | WP_001063816.1 | IS110-like element ISSso6 family transposase | - |
| FNA65_RS20965 () | 3862751..3862990 | - | 240 | Protein_3831 | nickel/cobalt efflux protein RcnA | - |
| FNA65_RS20970 () | 3863111..3863383 | + | 273 | WP_000019944.1 | Ni(II)/Co(II)-binding transcriptional repressor RcnR | - |
| FNA65_RS20975 () | 3863606..3864394 | + | 789 | WP_001195636.1 | hydroxyethylthiazole kinase | - |
| FNA65_RS20980 () | 3864391..3865191 | + | 801 | WP_000822274.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| FNA65_RS20985 () | 3865256..3866074 | + | 819 | WP_005031483.1 | glycoside hydrolase family 25 protein | - |
| FNA65_RS20990 () | 3866126..3866872 | + | 747 | WP_039080486.1 | GntR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|