MGE detailed information
MGE type: Genomic_island MGE length: 13397 bp
Accession: NZ_CP041511 Location: 1362513..1375909 Organism: Shigella sonnei strain KCCM 41282 Replicon: chromosome
Accession: NZ_CP041511 Location: 1362513..1375909 Organism: Shigella sonnei strain KCCM 41282 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FNA55_RS06600 (1357573) | 1357573..1361790 | + | 4218 | WP_140046287.1 | RHS element core protein | - |
| FNA55_RS06605 (1361802) | 1361802..1362251 | + | 450 | WP_005141515.1 | RHS element protein dsORF-h1 | - |
| FNA55_RS06610 (1362513) | 1362513..1363649 | + | 1137 | Protein_1267 | ISAs1 family transposase ISEc1 | Transposase |
| FNA55_RS06615 (1363687) | 1363687..1364097 | + | 411 | WP_162772774.1 | hypothetical protein | - |
| FNA55_RS06620 (1364097) | 1364097..1364474 | + | 378 | WP_001077737.1 | hypothetical protein | - |
| FNA55_RS06625 (1364943) | 1364943..1366079 | + | 1137 | WP_000420787.1 | ISAs1 family transposase ISEc1 | Transposase |
| FNA55_RS06630 (1366121) | 1366121..1366891 | - | 771 | WP_001118061.1 | 2-oxoglutaramate amidase | - |
| FNA55_RS06635 (1367072) | 1367072..1367518 | + | 447 | WP_005141527.1 | Ivy family C-type lysozyme inhibitor | - |
| FNA55_RS06640 (1367561) | 1367561..1370005 | - | 2445 | WP_000973074.1 | Acyl-coenzyme A dehydrogenase | VF |
| FNA55_RS06645 (1370245) | 1370245..1370823 | + | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| FNA55_RS06650 (1371029) | 1371029..1371796 | + | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| FNA55_RS06655 (1371767) | 1371767..1372507 | - | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| FNA55_RS06660 (1372663) | 1372663..1372941 | - | 279 | WP_000615976.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| FNA55_RS06665 (1372944) | 1372944..1373204 | - | 261 | WP_000729704.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| FNA55_RS06670 (1373390) | 1373390..1374163 | + | 774 | WP_127148796.1 | Murein DD-endopeptidase MepH | VF |
| FNA55_RS06680 (1375213) | 1375213..1375341 | + | 129 | Protein_1281 | ISAs1 family transposase | - |
| FNA55_RS06685 (1375412) | 1375412..1375909 | + | 498 | WP_000006258.1 | REP-associated tyrosine transposase RayT | - |
| FNA55_RS06690 (1376032) | 1376032..1377744 | - | 1713 | Protein_1283 | flagellar biosynthesis protein FlhA | - |
| FNA55_RS06695 (1377716) | 1377716..1378501 | + | 786 | WP_000207568.1 | putative lateral flagellar export/assembly protein LafU | - |
| FNA55_RS06700 (1378572) | 1378572..1379627 | + | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| FNA55_RS06705 (1379624) | 1379624..1380076 | + | 453 | WP_001059889.1 | GNAT family N-acetyltransferase | - |
| FNA55_RS06710 (1380322) | 1380322..1380843 | + | 522 | Protein_1287 | RNA ligase RtcB family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|