MGE detailed information
MGE type: Genomic_island MGE length: 19609 bp
Accession: NZ_CP041448 Location: 3807780..3827388 Organism: Escherichia coli strain YPE10 Replicon: chromosome
Accession: NZ_CP041448 Location: 3807780..3827388 Organism: Escherichia coli strain YPE10 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FNP79_RS19355 () | 3803283..3803684 | - | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
| FNP79_RS19360 () | 3803742..3804986 | - | 1245 | WP_000189541.1 | esterase FrsA | - |
| - () | 3804402..3804482 | - | 81 | NuclAT_11 | - | - |
| - () | 3804402..3804482 | - | 81 | NuclAT_11 | - | - |
| - () | 3804402..3804482 | - | 81 | NuclAT_11 | - | - |
| - () | 3804402..3804482 | - | 81 | NuclAT_11 | - | - |
| FNP79_RS19365 () | 3805078..3805536 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| FNP79_RS19370 () | 3805797..3807254 | + | 1458 | WP_001293003.1 | cytosol nonspecific dipeptidase | - |
| FNP79_RS19375 () | 3807311..3807832 | - | 522 | Protein_3634 | peptide chain release factor H | - |
| FNP79_RS19380 () | 3807831..3808034 | - | 204 | Protein_3635 | RNA ligase RtcB family protein | - |
| FNP79_RS19385 () | 3808280..3808732 | - | 453 | WP_001059847.1 | GNAT family N-acetyltransferase | - |
| FNP79_RS19390 () | 3808742..3809140 | - | 399 | WP_001263493.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| FNP79_RS19395 () | 3809143..3809436 | - | 294 | WP_000554757.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| FNP79_RS19400 () | 3809488..3810543 | - | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| FNP79_RS19405 () | 3810614..3811399 | - | 786 | WP_000207587.1 | Chemotaxis protein LafU | VF |
| FNP79_RS19410 () | 3811344..3813083 | + | 1740 | WP_001334802.1 | Flagellar biosynthesis protein FlhA | VF |
| FNP79_RS19415 () | 3813307..3813804 | - | 498 | WP_000006255.1 | REP-associated tyrosine transposase RayT | - |
| FNP79_RS19420 () | 3813980..3814729 | - | 750 | WP_024192679.1 | Murein DD-endopeptidase MepH | VF |
| FNP79_RS19425 () | 3814939..3815199 | + | 261 | WP_000729703.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| FNP79_RS19430 () | 3815202..3815480 | + | 279 | WP_000615983.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| FNP79_RS19435 () | 3815636..3816376 | + | 741 | WP_001225679.1 | murein L,D-transpeptidase | - |
| FNP79_RS19440 () | 3816347..3817114 | - | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| FNP79_RS19445 () | 3817320..3817898 | - | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| FNP79_RS19450 () | 3818138..3820582 | + | 2445 | WP_151044204.1 | Acyl-coenzyme A dehydrogenase | VF |
| FNP79_RS19455 () | 3820625..3821098 | - | 474 | WP_000532698.1 | Ivy family C-type lysozyme inhibitor | - |
| FNP79_RS19460 () | 3821252..3822022 | + | 771 | WP_001118036.1 | 2-oxoglutaramate amidase | - |
| FNP79_RS19465 () | 3822063..3822191 | - | 129 | Protein_3652 | ISAs1 family transposase | - |
| FNP79_RS19470 () | 3822246..3822943 | + | 698 | Protein_3653 | IS1 family transposase | - |
| FNP79_RS19475 () | 3822950..3823156 | + | 207 | Protein_3654 | hypothetical protein | - |
| FNP79_RS19480 () | 3823293..3824078 | - | 786 | WP_001053628.1 | hypothetical protein | - |
| FNP79_RS19490 () | 3824617..3825348 | - | 732 | WP_001300756.1 | DNA polymerase III subunit epsilon | - |
| FNP79_RS19495 () | 3825413..3825880 | + | 468 | WP_000917883.1 | ribonuclease HI | - |
| FNP79_RS19500 () | 3825877..3826599 | - | 723 | WP_001297210.1 | class I SAM-dependent methyltransferase | - |
| FNP79_RS19505 () | 3826633..3827388 | + | 756 | WP_001052717.1 | hydroxyacylglutathione hydrolase | - |
| FNP79_RS19510 () | 3827460..3828818 | + | 1359 | WP_000644685.1 | murein transglycosylase D | - |
| FNP79_RS19515 () | 3828866..3829462 | - | 597 | Protein_3661 | methyltransferase domain-containing protein | - |
| FNP79_RS19520 () | 3829493..3830293 | - | 801 | WP_001230983.1 | endonuclease/exonuclease/phosphatase family protein | - |
| FNP79_RS19525 () | 3830534..3831448 | + | 915 | WP_000648577.1 | LysR family transcriptional regulator | - |
| FNP79_RS19530 () | 3831445..3832248 | - | 804 | WP_000997050.1 | 2,5-didehydrogluconate reductase DkgB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|