MGE detailed information
MGE type: Mobilizable plasmid MGE length: 78706 bp
Accession: NZ_CP041444 Location: 1..78706 Organism: Escherichia coli strain YPE10 Replicon: plasmid pYPE10-78k
Accession: NZ_CP041444 Location: 1..78706 Organism: Escherichia coli strain YPE10 Replicon: plasmid pYPE10-78k
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FNP79_RS00010 () | 223..1038 | + | 816 | WP_001043260.1 | hypothetical protein | ARG |
| FNP79_RS00015 () | 1125..1367 | + | 243 | Protein_2 | phosphoglucosamine mutase | - |
| FNP79_RS00020 () | 1321..1572 | - | 252 | WP_001445143.1 | hypothetical protein | - |
| FNP79_RS00025 () | 1603..3096 | - | 1494 | WP_001120888.1 | IS91 family transposase ISVsa3 | Transposase |
| FNP79_RS00030 () | 3208..3513 | - | 306 | WP_001255015.1 | HTH-type transcriptional regulator CynR | VF |
| FNP79_RS00035 () | 3541..4755 | - | 1215 | WP_058657119.1 | Transcriptional activator protein NhaR | ARG |
| FNP79_RS00040 () | 4972..5856 | - | 885 | WP_001447541.1 | DUF3363 domain-containing protein | - |
| FNP79_RS00045 () | 5887..6717 | - | 831 | Protein_8 | IS91 family transposase ISVsa3 | Transposase |
| FNP79_RS00050 () | 6781..7485 | + | 705 | WP_001067784.1 | IS6 family transposase IS1006 | Transposase |
| FNP79_RS00055 () | 7570..7959 | - | 390 | WP_065800308.1 | hypothetical protein | - |
| FNP79_RS00060 () | 8224..9228 | - | 1005 | WP_000427623.1 | IS110 family transposase IS4321R | Transposase |
| FNP79_RS00065 () | 9307..12258 | - | 2952 | WP_015344976.1 | Tn3 family transposase TnpA_TnAs3 | Transposase |
| FNP79_RS00070 () | 12261..12821 | - | 561 | WP_000147567.1 | Tn3 family transposase TnpR_TnAs3 | Transposase |
| FNP79_RS00075 () | 12947..13297 | - | 351 | WP_000454193.1 | DUF3330 domain-containing protein | - |
| FNP79_RS00085 () | 13500..14513 | - | 1014 | WP_000845048.1 | IS91 family transposase ISAzo26 | Transposase |
| FNP79_RS00090 () | 14661..15158 | + | 498 | WP_001083725.1 | Dihydrofolate reductase | ARG |
| FNP79_RS00095 () | 15270..15560 | + | 291 | WP_001336345.1 | DUF1010 domain-containing protein | - |
| FNP79_RS00100 () | 15566..16357 | + | 792 | WP_001206356.1 | Streptomycin 3''-adenylyltransferase | ARG |
| FNP79_RS00110 () | 16613..17248 | - | 636 | Protein_19 | IS256 family transposase IS406 | Transposase |
| FNP79_RS00115 () | 17488..17655 | - | 168 | WP_000336323.1 | cysteine-rich KTR domain-containing protein | - |
| FNP79_RS00120 () | 17774..19693 | - | 1920 | WP_025989258.1 | Tetracycline resistance protein TetM from transposon TnFO1 | VF |
| FNP79_RS00125 () | 19709..19825 | - | 117 | WP_001814923.1 | tetracycline resistance determinant leader peptide | - |
| FNP79_RS00130 () | 20070..20537 | - | 468 | Protein_23 | conjugal transfer protein | - |
| FNP79_RS00135 () | 20591..21295 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| FNP79_RS00140 () | 21361..21582 | + | 222 | Protein_25 | IS6 family transposase IS15 | Transposase |
| FNP79_RS00150 () | 21787..24033 | + | 2247 | Protein_26 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| FNP79_RS00155 () | 24058..25767 | + | 1710 | Protein_27 | Outer membrane usher protein PapC | VF |
| FNP79_RS00160 () | 25789..26538 | + | 750 | WP_001352149.1 | Chaperone protein PapD | VF |
| FNP79_RS00165 () | 26540..27604 | + | 1065 | WP_001269817.1 | fimbrial protein | - |
| FNP79_RS00170 () | 27647..27847 | - | 201 | WP_046788569.1 | cell surface composition regulator GlgS | - |
| FNP79_RS00175 () | 28116..28709 | + | 594 | WP_000599943.1 | DUF1449 family protein | - |
| FNP79_RS00180 () | 28743..29440 | + | 698 | Protein_32 | IS1 family transposase IS1R | Transposase |
| FNP79_RS00185 () | 29456..29833 | - | 378 | Protein_33 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| FNP79_RS00190 () | 30072..31286 | + | 1215 | WP_001532073.1 | type II site-specific deoxyribonuclease | - |
| FNP79_RS00195 () | 31320..32723 | - | 1404 | WP_072135327.1 | DNA cytosine methyltransferase | - |
| FNP79_RS00200 () | 32847..33119 | + | 273 | Protein_36 | IS1 family transposase IS1X2 | Transposase |
| FNP79_RS00205 () | 33139..33336 | - | 198 | WP_000844102.1 | hypothetical protein | - |
| FNP79_RS00210 () | 33435..34403 | - | 969 | WP_000654802.1 | IS5 family transposase IS903B | Transposase |
| FNP79_RS00215 () | 34425..34895 | - | 471 | WP_094320909.1 | restriction endonuclease | - |
| FNP79_RS00220 () | 35104..35415 | - | 312 | WP_001452736.1 | hypothetical protein | - |
| FNP79_RS00225 () | 35451..35765 | - | 315 | WP_000734776.1 | IncN plasmid KikA protein | - |
| FNP79_RS00230 () | 35806..36503 | - | 698 | Protein_42 | IS1 family transposase IS1R | Transposase |
| FNP79_RS00235 () | 36578..36859 | - | 282 | WP_000220560.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| FNP79_RS00240 () | 36849..37100 | - | 252 | WP_000121743.1 | plasmid stabilization protein | Antitoxin Detail |
| FNP79_RS00255 () | 38334..39170 | + | 837 | WP_001050931.1 | replication initiation protein | - |
| FNP79_RS00260 () | 39210..39656 | + | 447 | Protein_46 | hypothetical protein | - |
| FNP79_RS00265 () | 39724..40149 | + | 426 | WP_000202942.1 | hypothetical protein | - |
| FNP79_RS00270 () | 40146..41123 | - | 978 | WP_024245156.1 | hypothetical protein | - |
| FNP79_RS00275 () | 41148..41429 | - | 282 | WP_001185482.1 | hypothetical protein | - |
| FNP79_RS00280 () | 41527..42189 | - | 663 | WP_000516402.1 | peptidyl-arginine deiminase | - |
| FNP79_RS00285 () | 42570..43214 | + | 645 | WP_000203396.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| FNP79_RS00290 () | 43502..44809 | - | 1308 | WP_065314367.1 | Methyl-accepting chemotaxis protein McpQ | VF |
| FNP79_RS00295 () | 44868..45572 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| FNP79_RS00305 () | 45616..46476 | + | 861 | Protein_54 | ISKra4 family transposase ISKpn19 | Transposase |
| FNP79_RS00310 () | 46509..46937 | + | 429 | Protein_55 | Tn3 family transposase TnpR_ISMex22 | Transposase |
| FNP79_RS00315 () | 47256..47912 | - | 657 | WP_001516695.1 | Pentapeptide repeat protein | ARG |
| FNP79_RS00320 () | 48307..49322 | + | 1016 | Protein_57 | IS3 family transposase ISEc36 | Transposase |
| FNP79_RS00325 () | 49365..52370 | - | 3006 | WP_001143760.1 | Tn3 family transposase TnpA_Tn3 | Transposase |
| FNP79_RS00330 () | 52534..53091 | + | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| FNP79_RS00335 () | 53274..54134 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| FNP79_RS00340 () | 54282..54731 | + | 450 | Protein_61 | hypothetical protein | - |
| FNP79_RS00345 () | 54728..55504 | + | 777 | WP_000015958.1 | site-specific integrase | - |
| FNP79_RS00350 () | 55562..55819 | - | 258 | WP_000764642.1 | hypothetical protein | - |
| FNP79_RS25495 () | 55948..56052 | - | 105 | WP_032409716.1 | hypothetical protein | - |
| FNP79_RS00355 () | 56582..57448 | + | 867 | WP_004118283.1 | replication initiation protein | - |
| FNP79_RS00360 () | 57625..57894 | - | 270 | WP_000339857.1 | hypothetical protein | - |
| FNP79_RS00365 () | 58309..59514 | + | 1206 | WP_000368714.1 | AAA family ATPase | - |
| FNP79_RS00370 () | 59514..60488 | + | 975 | WP_000064119.1 | ParB/RepB/Spo0J family partition protein | - |
| FNP79_RS00375 () | 60570..61841 | - | 1272 | WP_047671986.1 | Y-family DNA polymerase | - |
| FNP79_RS00380 () | 61841..62272 | - | 432 | WP_000776034.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| FNP79_RS00390 () | 62678..64165 | + | 1488 | Protein_71 | group II intron reverse transcriptase/maturase | - |
| FNP79_RS00395 () | 64317..65014 | + | 698 | Protein_72 | IS1 family transposase | - |
| FNP79_RS00400 () | 65024..65332 | + | 309 | Protein_73 | replication initiation protein | - |
| FNP79_RS00405 () | 66180..67148 | + | 969 | WP_030005799.1 | IS5 family transposase IS903B | Transposase |
| FNP79_RS00415 () | 67288..67674 | - | 387 | WP_001039464.1 | hypothetical protein | - |
| FNP79_RS00420 () | 68255..68437 | + | 183 | Protein_76 | IS5/IS1182 family transposase | - |
| FNP79_RS00425 () | 68468..70219 | - | 1752 | Protein_77 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| FNP79_RS00430 () | 70208..70615 | + | 408 | WP_001214976.1 | cysteine hydrolase | - |
| FNP79_RS00435 () | 70753..71637 | + | 885 | WP_079838965.1 | EamA family transporter | - |
| FNP79_RS00440 () | 71669..72868 | - | 1200 | WP_001493765.1 | Tetracycline resistance protein, class C | ARG |
| FNP79_RS00445 () | 72974..73624 | + | 651 | WP_001493764.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| FNP79_RS00450 () | 73656..73898 | - | 243 | WP_000844627.1 | transposase | - |
| FNP79_RS00455 () | 73956..75470 | - | 1515 | Protein_83 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| FNP79_RS00460 () | 75536..76240 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| FNP79_RS00465 () | 76296..76775 | + | 480 | WP_072202717.1 | phenol hydroxylase | - |
| FNP79_RS00475 () | 76972..77166 | - | 195 | Protein_86 | IS4 family transposase ISAba1 | Transposase |
| FNP79_RS00480 () | 77224..77921 | + | 698 | Protein_87 | IS1 family transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|