MGE detailed information
MGE type: Prophage MGE length: 92430 bp
Accession: NZ_CP041442 Location: 3652484..3744913 Organism: Escherichia coli strain YPE12 Replicon: chromosome
Accession: NZ_CP041442 Location: 3652484..3744913 Organism: Escherichia coli strain YPE12 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FNP80_RS19345 () | 3649093..3650049 | + | 957 | WP_000121359.1 | molybdenum cofactor insertion chaperone PaoD | - |
| FNP80_RS19350 () | 3650028..3650438 | + | 411 | WP_001111348.1 | hypothetical protein | - |
| FNP80_RS19355 () | 3651007..3652023 | + | 1017 | WP_064670530.1 | hypothetical protein | - |
| FNP80_RS19360 () | 3652484..3653716 | + | 1233 | WP_064670529.1 | hypothetical protein | - |
| FNP80_RS19365 () | 3653845..3654429 | - | 585 | WP_064670528.1 | tail fiber assembly protein | - |
| FNP80_RS19370 () | 3654429..3657779 | - | 3351 | WP_151140399.1 | prophage tail fiber N-terminal domain-containing protein | - |
| FNP80_RS19375 () | 3657844..3658047 | - | 204 | Protein_3443 | Ail/Lom family outer membrane beta-barrel protein | - |
| FNP80_RS19380 () | 3658044..3658262 | - | 219 | Protein_3444 | hypothetical protein | - |
| FNP80_RS19385 () | 3658352..3658897 | - | 546 | WP_000453558.1 | DNA-packaging protein | - |
| FNP80_RS19390 () | 3659235..3659555 | + | 321 | WP_000025003.1 | hypothetical protein | - |
| FNP80_RS19395 () | 3659936..3660379 | - | 444 | WP_085438473.1 | lysis protein | - |
| FNP80_RS19400 () | 3660376..3660708 | - | 333 | Protein_3448 | lysozyme RrrD | - |
| FNP80_RS19405 () | 3660709..3660903 | + | 195 | Protein_3449 | hypothetical protein | - |
| FNP80_RS19410 () | 3660900..3661580 | + | 681 | WP_000186784.1 | YqaJ viral recombinase family protein | - |
| FNP80_RS19415 () | 3661577..3661759 | + | 183 | WP_072126246.1 | DUF1317 domain-containing protein | - |
| FNP80_RS19420 () | 3661732..3661923 | + | 192 | WP_000548531.1 | DUF1382 family protein | - |
| FNP80_RS19425 () | 3662000..3662215 | + | 216 | WP_000188870.1 | hypothetical protein | - |
| FNP80_RS19430 () | 3662314..3662532 | + | 219 | WP_085438467.1 | TraR/DksA family transcriptional regulator | - |
| FNP80_RS19435 () | 3662580..3662858 | + | 279 | WP_000488407.1 | DUF4222 domain-containing protein | - |
| FNP80_RS19445 () | 3663057..3664220 | + | 1164 | WP_053271768.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| FNP80_RS19450 () | 3664723..3664875 | - | 153 | WP_085438561.1 | tail fiber assembly protein | - |
| FNP80_RS19455 () | 3664805..3664957 | - | 153 | Protein_3458 | transposase | - |
| FNP80_RS19465 () | 3665471..3666553 | + | 1083 | WP_085438563.1 | acyltransferase | - |
| FNP80_RS25480 () | 3666599..3666763 | - | 165 | WP_021548946.1 | hypothetical protein | - |
| FNP80_RS19470 () | 3666774..3667190 | - | 417 | WP_136710480.1 | tail assembly chaperone | - |
| FNP80_RS19480 () | 3667909..3668205 | - | 297 | Protein_3462 | hypothetical protein | - |
| FNP80_RS19485 () | 3668193..3668531 | - | 339 | WP_064670553.1 | RusA family crossover junction endodeoxyribonuclease | - |
| FNP80_RS19490 () | 3668528..3668818 | - | 291 | WP_000774473.1 | DUF1364 domain-containing protein | - |
| FNP80_RS19495 () | 3668811..3668981 | - | 171 | WP_000211034.1 | hypothetical protein | - |
| FNP80_RS19500 () | 3668981..3669436 | - | 456 | WP_064670554.1 | DNA base-flipping protein YbcN | - |
| FNP80_RS19505 () | 3669433..3669534 | - | 102 | WP_072097297.1 | hypothetical protein | - |
| FNP80_RS19510 () | 3669629..3670411 | - | 783 | WP_074400827.1 | hypothetical protein | - |
| FNP80_RS19515 () | 3670586..3670909 | - | 324 | WP_064670555.1 | hypothetical protein | - |
| FNP80_RS19520 () | 3671021..3672547 | - | 1527 | WP_000709067.1 | hypothetical protein ; Integrase | Integrase |
| FNP80_RS19525 () | 3672605..3672754 | - | 150 | WP_001301135.1 | hypothetical protein | - |
| FNP80_RS19530 () | 3672803..3673135 | - | 333 | WP_001070442.1 | SMR family multidrug efflux protein EmrE | - |
| FNP80_RS19535 () | 3673203..3673505 | - | 303 | WP_000145915.1 | protein ren | - |
| FNP80_RS19540 () | 3673502..3674203 | - | 702 | WP_000788886.1 | Replication protein P | - |
| FNP80_RS19545 () | 3674200..3675219 | - | 1020 | WP_077883990.1 | replication protein | - |
| FNP80_RS19550 () | 3675216..3675755 | - | 540 | WP_064670556.1 | toxin YdaT domain-containing protein | - |
| FNP80_RS19555 () | 3675786..3676013 | - | 228 | WP_000184665.1 | helix-turn-helix domain-containing protein | - |
| FNP80_RS19560 () | 3676124..3676816 | + | 693 | WP_001295669.1 | helix-turn-helix transcriptional regulator | - |
| FNP80_RS19565 () | 3676897..3677958 | + | 1062 | WP_000380252.1 | hypothetical protein | - |
| FNP80_RS19570 () | 3677936..3678313 | + | 378 | WP_000866321.1 | ASCH domain-containing protein | - |
| FNP80_RS19575 () | 3678789..3678995 | + | 207 | WP_000233576.1 | phage encoded cell division inhibitor protein | - |
| FNP80_RS19585 () | 3679071..3679367 | + | 297 | WP_033561765.1 | host-nuclease inhibitor protein Gam | - |
| FNP80_RS19590 () | 3679373..3680200 | + | 828 | WP_074400828.1 | hypothetical protein ; Integrase | Integrase |
| FNP80_RS19595 () | 3680251..3680948 | + | 698 | Protein_3484 | IS1 family transposase IS1X2 | Transposase |
| FNP80_RS19600 () | 3680978..3681772 | - | 795 | WP_024220864.1 | P-type conjugative transfer protein TrbJ | - |
| FNP80_RS19605 () | 3681854..3682207 | - | 354 | WP_000218773.1 | conjugal transfer transcriptional regulator TraJ | - |
| FNP80_RS19610 () | 3682491..3682772 | - | 282 | WP_029380176.1 | hypothetical protein | - |
| FNP80_RS19615 () | 3683723..3683980 | + | 258 | WP_071840188.1 | HigA family addiction module antidote protein | - |
| FNP80_RS19620 () | 3684035..3685780 | - | 1746 | WP_000470135.1 | DUF2326 domain-containing protein | - |
| FNP80_RS19625 () | 3685749..3685997 | - | 249 | WP_000926290.1 | hypothetical protein | - |
| FNP80_RS19630 () | 3685969..3686949 | - | 981 | WP_001082070.1 | SMEK domain-containing protein | - |
| FNP80_RS19635 () | 3687642..3688781 | + | 1140 | WP_000784327.1 | hypothetical protein | - |
| FNP80_RS19640 () | 3689335..3690549 | + | 1215 | WP_072161528.1 | type II restriction endonuclease | - |
| FNP80_RS19645 () | 3690584..3691987 | - | 1404 | WP_175267657.1 | DNA cytosine methyltransferase | - |
| FNP80_RS19650 () | 3692421..3693194 | + | 774 | WP_000355484.1 | hypothetical protein | - |
| FNP80_RS19655 () | 3693255..3693809 | - | 555 | WP_151140400.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| FNP80_RS19660 () | 3693839..3694248 | + | 410 | Protein_3497 | phage tail protein | - |
| FNP80_RS19665 () | 3694269..3694712 | + | 444 | WP_001008234.1 | tail fiber assembly protein | - |
| FNP80_RS19670 () | 3694684..3695286 | - | 603 | WP_151140401.1 | tail fiber assembly protein | - |
| FNP80_RS19675 () | 3695286..3696008 | - | 723 | WP_151140402.1 | phage tail protein | - |
| FNP80_RS19680 () | 3696012..3696596 | - | 585 | WP_063073499.1 | YmfQ family protein | - |
| FNP80_RS19685 () | 3696587..3697645 | - | 1059 | WP_028125900.1 | baseplate J/gp47 family protein | - |
| FNP80_RS19690 () | 3697632..3698057 | - | 426 | WP_000424744.1 | phage GP46 family protein | - |
| FNP80_RS19695 () | 3698057..3698605 | - | 549 | WP_052921837.1 | phage baseplate assembly protein V | - |
| FNP80_RS19700 () | 3698605..3699684 | - | 1080 | WP_063073500.1 | baseplate protein | - |
| FNP80_RS19705 () | 3699681..3701009 | - | 1329 | WP_063073501.1 | DNA circularization N-terminal domain-containing protein | - |
| FNP80_RS19710 () | 3701063..3701740 | - | 678 | WP_040072272.1 | hypothetical protein | - |
| FNP80_RS19715 () | 3701822..3703603 | - | 1782 | WP_063073503.1 | phage tail tape measure protein | - |
| FNP80_RS19725 () | 3703745..3704014 | - | 270 | WP_000661054.1 | phage tail assembly protein | - |
| FNP80_RS19730 () | 3704014..3704370 | - | 357 | WP_000090998.1 | phage tail tube protein | - |
| FNP80_RS19735 () | 3704370..3705866 | - | 1497 | WP_151140403.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| FNP80_RS19740 () | 3705850..3706020 | - | 171 | WP_063073505.1 | DUF2635 domain-containing protein | - |
| FNP80_RS19745 () | 3706029..3706589 | - | 561 | WP_000779292.1 | hypothetical protein | - |
| FNP80_RS19750 () | 3706586..3707092 | - | 507 | WP_000224836.1 | hypothetical protein | - |
| FNP80_RS19755 () | 3707067..3707477 | - | 411 | WP_000702401.1 | phage head closure protein | - |
| FNP80_RS19760 () | 3707474..3707797 | - | 324 | WP_000927711.1 | head-tail connector protein | - |
| FNP80_RS19765 () | 3707800..3708000 | - | 201 | WP_000601360.1 | hypothetical protein | - |
| FNP80_RS19770 () | 3708050..3709255 | - | 1206 | WP_063073507.1 | phage major capsid protein | - |
| FNP80_RS19775 () | 3709270..3709920 | - | 651 | WP_001193640.1 | HK97 family phage prohead protease | - |
| FNP80_RS19780 () | 3709898..3711139 | - | 1242 | WP_000466255.1 | phage portal protein | - |
| FNP80_RS19785 () | 3711139..3711321 | - | 183 | WP_000605605.1 | hypothetical protein | - |
| FNP80_RS19790 () | 3711333..3712829 | - | 1497 | WP_072011717.1 | terminase large subunit | - |
| FNP80_RS19795 () | 3713068..3713553 | - | 486 | WP_063073508.1 | phage terminase small subunit P27 family | - |
| FNP80_RS19800 () | 3713679..3714029 | - | 351 | WP_001135220.1 | HNH endonuclease | - |
| FNP80_RS19810 () | 3714554..3714847 | + | 294 | WP_000738423.1 | increased serum survival lipoprotein Iss | - |
| FNP80_RS19815 () | 3714938..3715120 | - | 183 | WP_123010240.1 | prophage lysis lipoprotein RzoD | - |
| FNP80_RS19820 () | 3715337..3715813 | - | 477 | WP_001197766.1 | glycoside hydrolase family protein | - |
| FNP80_RS19825 () | 3715817..3716143 | - | 327 | WP_001120496.1 | phage holin, lambda family | - |
| FNP80_RS19830 () | 3716462..3717559 | + | 1098 | WP_001532221.1 | hypothetical protein | - |
| FNP80_RS19835 () | 3717570..3717992 | + | 423 | WP_021552536.1 | hypothetical protein | - |
| FNP80_RS19840 () | 3717985..3718620 | + | 636 | WP_063073510.1 | hypothetical protein | - |
| FNP80_RS19845 () | 3718596..3718982 | - | 387 | WP_021552535.1 | hypothetical protein | - |
| FNP80_RS19850 () | 3719001..3719990 | - | 990 | WP_021552534.1 | DUF968 domain-containing protein | - |
| FNP80_RS19855 () | 3719998..3720807 | - | 810 | WP_001061445.1 | KilA-N domain-containing protein | - |
| FNP80_RS19860 () | 3720827..3721216 | - | 390 | WP_000767103.1 | RusA family crossover junction endodeoxyribonuclease | - |
| FNP80_RS19865 () | 3721213..3721539 | - | 327 | WP_061356387.1 | LexA family transcriptional regulator | - |
| FNP80_RS19870 () | 3721539..3722033 | - | 495 | WP_074149693.1 | PerC family transcriptional regulator | - |
| FNP80_RS19875 () | 3722030..3722971 | - | 942 | WP_061356389.1 | helix-turn-helix domain-containing protein | - |
| FNP80_RS19880 () | 3722961..3723140 | - | 180 | WP_001250269.1 | DUF4222 domain-containing protein | - |
| FNP80_RS19885 () | 3723316..3723873 | - | 558 | WP_063073513.1 | protein YmfL | - |
| FNP80_RS19890 () | 3723917..3724117 | - | 201 | WP_000649477.1 | helix-turn-helix domain-containing protein | - |
| FNP80_RS19895 () | 3724208..3724882 | + | 675 | WP_000848748.1 | LexA family transcriptional repressor | - |
| FNP80_RS19900 () | 3725117..3725323 | + | 207 | WP_000549626.1 | hypothetical protein | - |
| FNP80_RS19905 () | 3725295..3725729 | - | 435 | WP_000016389.1 | hypothetical protein | - |
| FNP80_RS19920 () | 3726274..3726810 | + | 537 | WP_000008236.1 | 5'-deoxynucleotidase | - |
| FNP80_RS19925 () | 3726801..3727163 | + | 363 | WP_001242749.1 | phage protein | - |
| FNP80_RS19930 () | 3727163..3727468 | + | 306 | WP_000206732.1 | hypothetical protein | - |
| FNP80_RS19940 () | 3727695..3728858 | + | 1164 | WP_000051887.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| FNP80_RS19950 () | 3729063..3730316 | - | 1254 | WP_000893278.1 | glutamate-5-semialdehyde dehydrogenase | - |
| FNP80_RS19955 () | 3730328..3731431 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| FNP80_RS19960 () | 3731719..3732774 | + | 1056 | WP_000749863.1 | phosphoporin PhoE | - |
| FNP80_RS19965 () | 3732813..3733214 | - | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
| FNP80_RS19970 () | 3733272..3734516 | - | 1245 | WP_000189541.1 | esterase FrsA | - |
| - () | 3733932..3734012 | - | 81 | NuclAT_11 | - | - |
| - () | 3733932..3734012 | - | 81 | NuclAT_11 | - | - |
| - () | 3733932..3734012 | - | 81 | NuclAT_11 | - | - |
| - () | 3733932..3734012 | - | 81 | NuclAT_11 | - | - |
| FNP80_RS19975 () | 3734608..3735066 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| FNP80_RS19980 () | 3735327..3736784 | + | 1458 | WP_001293003.1 | cytosol nonspecific dipeptidase | - |
| FNP80_RS19985 () | 3736841..3737362 | - | 522 | Protein_3556 | peptide chain release factor H | - |
| FNP80_RS19990 () | 3737361..3737564 | - | 204 | Protein_3557 | RNA ligase RtcB family protein | - |
| FNP80_RS19995 () | 3737810..3738262 | - | 453 | WP_001059847.1 | GNAT family N-acetyltransferase | - |
| FNP80_RS20000 () | 3738336..3739033 | + | 698 | Protein_3559 | IS1 family transposase | - |
| FNP80_RS20005 () | 3739049..3739447 | - | 399 | WP_001263493.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| FNP80_RS20010 () | 3739450..3739743 | - | 294 | WP_000554757.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| FNP80_RS20015 () | 3739795..3740850 | - | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| FNP80_RS20020 () | 3740921..3741706 | - | 786 | WP_000207587.1 | hypothetical protein | VF |
| FNP80_RS20025 () | 3741651..3743390 | + | 1740 | WP_001334802.1 | hypothetical protein | VF |
| FNP80_RS20030 () | 3743614..3744111 | - | 498 | WP_000006255.1 | REP-associated tyrosine transposase RayT | - |
| FNP80_RS20035 () | 3744287..3745036 | - | 750 | WP_024192679.1 | hypothetical protein | VF |
| FNP80_RS20040 () | 3745246..3745506 | + | 261 | WP_000729703.1 | type II toxin-antitoxin system antitoxin DinJ | - |
| FNP80_RS20045 () | 3745509..3745787 | + | 279 | WP_000615983.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | - |
| FNP80_RS20050 () | 3745943..3746683 | + | 741 | WP_001225679.1 | murein L,D-transpeptidase | - |
| FNP80_RS20055 () | 3746654..3747421 | - | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| FNP80_RS20060 () | 3747627..3748205 | - | 579 | WP_000284050.1 | D-sedoheptulose 7-phosphate isomerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|