MGE detailed information
MGE type: Conjugative plasmid MGE length: 80039 bp
Accession: NZ_CP041434 Location: 1..80039 Organism: Escherichia coli strain STEC313 Replicon: plasmid pSTEC313
Accession: NZ_CP041434 Location: 1..80039 Organism: Escherichia coli strain STEC313 Replicon: plasmid pSTEC313
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FNE82_RS24845 () | 96..476 | - | 381 | WP_143361631.1 | hypothetical protein | - |
| FNE82_RS24850 () | 592..1285 | - | 694 | Protein_1 | Chaperone protein FaeE | VF |
| FNE82_RS24855 () | 1278..3689 | - | 2412 | WP_161620840.1 | putative outer membrane usher protein ElfC | VF |
| FNE82_RS24860 () | 3797..4309 | - | 513 | WP_096117498.1 | Major MR/P fimbria protein | VF |
| FNE82_RS24865 () | 4440..4712 | - | 273 | WP_161620442.1 | transcriptional regulator | - |
| FNE82_RS24870 () | 4948..5823 | - | 876 | WP_096117496.1 | helix-turn-helix domain-containing protein | - |
| FNE82_RS24875 () | 6456..6708 | + | 253 | Protein_6 | transposase | - |
| FNE82_RS24880 () | 6671..7363 | + | 693 | Protein_7 | Tn3 family transposase TnpA_ISAzs17 | Transposase |
| FNE82_RS24895 () | 8765..10306 | + | 1542 | WP_001298859.1 | IS21 family transposase ISEc12 | Transposase |
| FNE82_RS24900 () | 10321..11067 | + | 747 | WP_001016257.1 | IS21 family transposase ISEc12 | Transposase |
| FNE82_RS24905 () | 11235..11504 | - | 270 | WP_096117481.1 | hypothetical protein | - |
| FNE82_RS25495 () | 11577..11717 | - | 141 | WP_012512742.1 | hypothetical protein | - |
| FNE82_RS24910 () | 12420..13277 | - | 858 | WP_001401515.1 | incFII family plasmid replication initiator RepA | - |
| FNE82_RS24915 () | 13270..13344 | - | 75 | WP_001375168.1 | RepA leader peptide Tap | - |
| FNE82_RS24920 () | 13578..13835 | - | 258 | WP_000083826.1 | replication regulatory protein RepA | - |
| FNE82_RS24925 () | 14075..14665 | - | 591 | WP_032082916.1 | DUF2726 domain-containing protein | - |
| FNE82_RS24930 () | 14703..14912 | - | 210 | WP_001302200.1 | hemolysin expression modulator Hha | - |
| FNE82_RS24935 () | 14958..15419 | - | 462 | WP_021545193.1 | thermonuclease family protein | - |
| FNE82_RS24940 () | 15718..15876 | - | 159 | WP_021545194.1 | hypothetical protein | - |
| FNE82_RS24945 () | 16009..16569 | - | 561 | WP_000840464.1 | fertility inhibition protein FinO | - |
| FNE82_RS24950 () | 16672..17532 | - | 861 | WP_000704511.1 | putative protein YcjY | VF |
| FNE82_RS24955 () | 17591..18337 | - | 747 | WP_000205749.1 | conjugal transfer pilus acetylase TraX | - |
| FNE82_RS24960 () | 18357..23627 | - | 5271 | WP_161620837.1 | Multifunctional conjugation protein TraI | Relaxase |
| FNE82_RS24965 () | 23709..23936 | + | 228 | WP_000450532.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| FNE82_RS24970 () | 23936..24334 | + | 399 | WP_000911317.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| FNE82_RS24975 () | 24343..26496 | - | 2154 | WP_000009350.1 | type IV conjugative transfer system coupling protein TraD | - |
| FNE82_RS24980 () | 26749..27480 | - | 732 | WP_161620838.1 | complement resistance protein TraT | - |
| FNE82_RS24985 () | 27494..28003 | - | 510 | WP_000628105.1 | conjugal transfer entry exclusion protein TraS | - |
| FNE82_RS24990 () | 28000..30825 | - | 2826 | WP_161620839.1 | conjugal transfer mating pair stabilization protein TraG | - |
| FNE82_RS24995 () | 30822..32195 | - | 1374 | WP_094259395.1 | conjugal transfer protein TraH | - |
| FNE82_RS25000 () | 32195..32608 | - | 414 | WP_094259396.1 | F-type conjugal transfer protein TrbF | - |
| FNE82_RS25005 () | 32562..32903 | - | 342 | WP_071836811.1 | P-type conjugative transfer protein TrbJ | - |
| FNE82_RS25010 () | 32833..33378 | - | 546 | WP_000059821.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| FNE82_RS25015 () | 33365..33646 | - | 282 | WP_000549793.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| FNE82_RS25020 () | 33762..34505 | - | 744 | WP_040100298.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| FNE82_RS25025 () | 34498..34758 | - | 261 | WP_000864348.1 | conjugal transfer protein TrbE | - |
| FNE82_RS25030 () | 34785..36593 | - | 1809 | WP_040100300.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| FNE82_RS25035 () | 36590..37228 | - | 639 | WP_000777692.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| FNE82_RS25040 () | 37237..38229 | - | 993 | WP_000830839.1 | conjugal transfer pilus assembly protein TraU | - |
| FNE82_RS25045 () | 38226..38858 | - | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| FNE82_RS25050 () | 38855..39241 | - | 387 | WP_049033539.1 | type-F conjugative transfer system protein TrbI | - |
| FNE82_RS25055 () | 39238..41865 | - | 2628 | WP_137544633.1 | type IV secretion system protein TraC | - |
| FNE82_RS25060 () | 42025..42246 | - | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
| FNE82_RS25065 () | 42381..42896 | - | 516 | WP_000809906.1 | type IV conjugative transfer system lipoprotein TraV | - |
| FNE82_RS25070 () | 42893..43144 | - | 252 | WP_001038342.1 | conjugal transfer protein TrbG | - |
| FNE82_RS25075 () | 43156..43386 | - | 231 | WP_001352845.1 | conjugal transfer protein TrbD | - |
| FNE82_RS25080 () | 43340..43930 | - | 591 | WP_000002787.1 | conjugal transfer protein TraP | - |
| FNE82_RS25085 () | 43920..45347 | - | 1428 | WP_160391242.1 | conjugal transfer protein TraB | - |
| FNE82_RS25090 () | 45347..46051 | - | 705 | WP_148718882.1 | type-F conjugative transfer system secretin TraK | - |
| FNE82_RS25095 () | 46062..46628 | - | 567 | WP_001717262.1 | type IV conjugative transfer system protein TraE | - |
| FNE82_RS25100 () | 46650..46961 | - | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| FNE82_RS25105 () | 46976..47341 | - | 366 | WP_000340270.1 | type IV conjugative transfer system pilin TraA | - |
| FNE82_RS25110 () | 47375..47602 | - | 228 | WP_001254386.1 | conjugal transfer relaxosome protein TraY | - |
| FNE82_RS25115 () | 47696..48382 | - | 687 | WP_000332492.1 | PAS domain-containing protein | - |
| FNE82_RS25120 () | 48572..48955 | - | 384 | WP_000124981.1 | relaxosome protein TraM | - |
| FNE82_RS25125 () | 49232..49879 | + | 648 | WP_123007297.1 | hypothetical protein | VF |
| FNE82_RS25130 () | 50176..50997 | - | 822 | WP_074014913.1 | DUF945 domain-containing protein | - |
| FNE82_RS25135 () | 51115..51312 | - | 198 | WP_052318758.1 | hypothetical protein | - |
| FNE82_RS25500 () | 51873..52028 | - | 156 | WP_170938106.1 | hypothetical protein | - |
| FNE82_RS25145 () | 52323..52481 | - | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 52525..52749 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 52525..52749 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 52525..52749 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 52525..52749 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| FNE82_RS25150 () | 52561..52749 | + | 189 | WP_001299721.1 | hypothetical protein | - |
| FNE82_RS25155 () | 52761..53480 | - | 720 | WP_001276232.1 | plasmid SOS inhibition protein A | - |
| FNE82_RS25160 () | 53477..53911 | - | 435 | WP_000845953.1 | conjugation system SOS inhibitor PsiB | - |
| FNE82_RS25165 () | 53966..55924 | - | 1959 | WP_161620594.1 | ParB/RepB/Spo0J family partition protein | - |
| FNE82_RS25170 () | 55990..56223 | - | 234 | WP_000005990.1 | DUF905 family protein | - |
| FNE82_RS25175 () | 56286..56825 | - | 540 | WP_161620593.1 | single-stranded DNA-binding protein | - |
| FNE82_RS25505 () | 56851..57057 | - | 207 | WP_000275853.1 | hypothetical protein | - |
| FNE82_RS25185 () | 57298..57552 | - | 255 | WP_135460463.1 | hypothetical protein | - |
| FNE82_RS25190 () | 57703..58266 | - | 564 | WP_042111888.1 | class I SAM-dependent methyltransferase | - |
| FNE82_RS25195 () | 58314..59675 | - | 1362 | Protein_70 | DUF3560 domain-containing protein | - |
| FNE82_RS25200 () | 59766..59957 | - | 192 | WP_096117490.1 | hypothetical protein | - |
| FNE82_RS25510 () | 60623..60778 | - | 156 | WP_001744062.1 | hypothetical protein | - |
| FNE82_RS25205 () | 60992..61183 | - | 192 | WP_001027516.1 | hypothetical protein | - |
| FNE82_RS25210 () | 61180..61602 | - | 423 | WP_000271753.1 | DUF1380 family protein | - |
| FNE82_RS25215 () | 61649..61951 | - | 303 | WP_001671341.1 | antirestriction protein | - |
| FNE82_RS25225 () | 62491..63261 | - | 771 | WP_001006199.1 | hypothetical protein | - |
| FNE82_RS25230 () | 63306..63740 | - | 435 | WP_000274432.1 | DUF1380 family protein | - |
| FNE82_RS25235 () | 63754..63975 | - | 222 | WP_001104873.1 | hypothetical protein | - |
| FNE82_RS25240 () | 63976..64659 | - | 684 | WP_000085940.1 | DNA methylase | - |
| FNE82_RS25245 () | 64736..65029 | - | 294 | WP_096117507.1 | hypothetical protein | - |
| FNE82_RS25250 () | 65177..66139 | + | 963 | WP_000959883.1 | plasmid segregation protein ParM | - |
| FNE82_RS25255 () | 66142..66492 | + | 351 | WP_000361384.1 | plasmid partitioning/stability family protein | - |
| FNE82_RS25260 () | 66643..67155 | - | 513 | WP_001027529.1 | hypothetical protein | - |
| FNE82_RS25265 () | 67597..69132 | + | 1536 | WP_077170529.1 | pore-forming bacteriocin colicin B | - |
| FNE82_RS25270 () | 69150..69677 | - | 528 | WP_032084022.1 | colicin B immunity protein | - |
| FNE82_RS25275 () | 69921..70736 | + | 816 | WP_032084023.1 | lipid II-degrading bacteriocin colicin M | - |
| FNE82_RS25280 () | 70786..71139 | - | 354 | WP_000864812.1 | colicin M immunity protein | - |
| FNE82_RS25285 () | 71312..72094 | - | 783 | WP_001164199.1 | site-specific integrase | - |
| FNE82_RS25290 () | 72096..72509 | - | 414 | WP_000465045.1 | hypothetical protein | - |
| FNE82_RS25295 () | 73435..73638 | - | 204 | Protein_90 | transposase | - |
| FNE82_RS25300 () | 74402..75099 | - | 698 | Protein_91 | IS1 family transposase IS1A | Transposase |
| FNE82_RS25305 () | 75505..76428 | + | 924 | WP_032084040.1 | hypothetical protein | - |
| FNE82_RS25310 () | 76712..77146 | + | 435 | Protein_93 | hypothetical protein | - |
| FNE82_RS25315 () | 77164..77510 | - | 347 | Protein_94 | hypothetical protein | - |
| FNE82_RS25320 () | 77780..78061 | - | 282 | WP_001105066.1 | hypothetical protein | - |
| FNE82_RS25325 () | 78167..78442 | - | 276 | WP_032084131.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| FNE82_RS25330 () | 78442..78726 | - | 285 | WP_032084130.1 | ribbon-helix-helix domain-containing protein | - |
| FNE82_RS25335 () | 78804..78890 | + | 87 | Protein_98 | ATP-binding protein | - |
| FNE82_RS25340 () | 78962..79087 | + | 126 | Protein_99 | IS256 family transposase | - |
| FNE82_RS25345 () | 79143..79985 | - | 843 | WP_160391234.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|