MGE detailed information
MGE type: Conjugative plasmid MGE length: 67626 bp
Accession: NZ_CP041428 Location: 1..67626 Organism: Escherichia coli strain STEC388 Replicon: plasmid pSTEC388_3
Accession: NZ_CP041428 Location: 1..67626 Organism: Escherichia coli strain STEC388 Replicon: plasmid pSTEC388_3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FNE85_RS25260 () | 380..1150 | + | 771 | WP_052908055.1 | hypothetical protein | - |
| FNE85_RS25275 () | 1685..1987 | + | 303 | WP_001671341.1 | antirestriction protein | - |
| FNE85_RS25280 () | 2034..2456 | + | 423 | WP_033548970.1 | DUF1380 family protein | - |
| FNE85_RS25285 () | 2453..2644 | + | 192 | WP_161623794.1 | hypothetical protein | - |
| FNE85_RS25290 () | 2916..3164 | - | 249 | WP_072048988.1 | hypothetical protein | - |
| FNE85_RS25295 () | 3677..3907 | + | 231 | WP_000155844.1 | hypothetical protein | - |
| FNE85_RS25300 () | 3959..5320 | + | 1362 | WP_000170657.1 | DUF3560 domain-containing protein | - |
| FNE85_RS25305 () | 5367..5930 | + | 564 | WP_001297832.1 | class I SAM-dependent methyltransferase | - |
| FNE85_RS25310 () | 6240..6464 | - | 225 | WP_001380475.1 | hypothetical protein | - |
| FNE85_RS25320 () | 6809..7336 | + | 528 | WP_059334604.1 | single-stranded DNA-binding protein | - |
| FNE85_RS25325 () | 7393..7626 | + | 234 | WP_000005975.1 | DUF905 domain-containing protein | - |
| FNE85_RS25330 () | 7687..9651 | + | 1965 | WP_161623795.1 | ParB/RepB/Spo0J family partition protein | - |
| FNE85_RS25335 () | 9706..10140 | + | 435 | WP_001763750.1 | conjugation system SOS inhibitor PsiB | - |
| FNE85_RS25340 () | 10137..10856 | + | 720 | WP_001276221.1 | plasmid SOS inhibition protein A | - |
| FNE85_RS25345 () | 10853..11167 | + | 315 | WP_000872086.1 | hypothetical protein | - |
| - () | 11124..11323 | + | 200 | NuclAT_0 | - | - |
| - () | 11124..11323 | + | 200 | NuclAT_0 | - | - |
| - () | 11124..11323 | + | 200 | NuclAT_0 | - | - |
| - () | 11124..11323 | + | 200 | NuclAT_0 | - | - |
| FNE85_RS25350 () | 11376..11537 | + | 162 | WP_000775238.1 | type I toxin-antitoxin system Hok family toxin | - |
| FNE85_RS25935 () | 11896..12120 | - | 225 | WP_178103025.1 | hypothetical protein | - |
| FNE85_RS25360 () | 12460..12756 | + | 297 | WP_001272251.1 | hypothetical protein | - |
| FNE85_RS25365 () | 12867..13688 | + | 822 | WP_161623796.1 | DUF945 domain-containing protein | - |
| FNE85_RS25370 () | 13985..14587 | - | 603 | WP_000243715.1 | hypothetical protein | VF |
| FNE85_RS25375 () | 14908..15291 | + | 384 | WP_001151524.1 | relaxosome protein TraM | - |
| FNE85_RS25380 () | 15478..16167 | + | 690 | WP_000283380.1 | conjugal transfer transcriptional regulator TraJ | - |
| FNE85_RS25385 () | 16266..16661 | + | 396 | WP_001309237.1 | conjugal transfer relaxosome protein TraY | - |
| FNE85_RS25390 () | 16694..17053 | + | 360 | WP_000994781.1 | type IV conjugative transfer system pilin TraA | - |
| FNE85_RS25395 () | 17068..17379 | + | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| FNE85_RS25400 () | 17401..17967 | + | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| FNE85_RS25405 () | 17978..18682 | + | 705 | WP_072095570.1 | type-F conjugative transfer system secretin TraK | - |
| FNE85_RS25410 () | 18682..20130 | + | 1449 | WP_161623797.1 | conjugal transfer protein TraB | - |
| FNE85_RS25415 () | 20120..20692 | + | 573 | WP_161623798.1 | conjugal transfer protein TraP | - |
| FNE85_RS25420 () | 20689..21006 | + | 318 | WP_053264192.1 | conjugal transfer protein TrbD | - |
| FNE85_RS25425 () | 21003..21254 | + | 252 | WP_032198481.1 | conjugal transfer protein TrbG | - |
| FNE85_RS25430 () | 21251..21766 | + | 516 | WP_161623799.1 | type IV conjugative transfer system lipoprotein TraV | - |
| FNE85_RS25435 () | 21901..22122 | + | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
| FNE85_RS25440 () | 22282..23547 | + | 1266 | WP_161623800.1 | TraC family protein | - |
| FNE85_RS25445 () | 23584..24261 | + | 678 | WP_096101123.1 | IS66 family transposase ISCro1 | Transposase |
| FNE85_RS25450 () | 24261..24608 | + | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| FNE85_RS25455 () | 24628..26199 | + | 1572 | WP_161623572.1 | IS66 family transposase ISCro1 | Transposase |
| FNE85_RS25460 () | 26231..26623 | + | 393 | Protein_38 | hypothetical protein | - |
| FNE85_RS25465 () | 26660..27337 | + | 678 | WP_096101123.1 | IS66 family transposase ISCro1 | Transposase |
| FNE85_RS25470 () | 27337..27684 | + | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| FNE85_RS25475 () | 27704..29275 | + | 1572 | WP_161623572.1 | IS66 family transposase ISCro1 | Transposase |
| FNE85_RS25480 () | 29307..30323 | + | 1017 | Protein_42 | type IV secretion system protein TraC | - |
| FNE85_RS25485 () | 30320..30706 | + | 387 | WP_000214084.1 | type-F conjugative transfer system protein TrbI | - |
| FNE85_RS25490 () | 30703..31335 | + | 633 | WP_001203745.1 | type-F conjugative transfer system protein TraW | - |
| FNE85_RS25495 () | 31332..32324 | + | 993 | WP_096094291.1 | conjugal transfer pilus assembly protein TraU | - |
| FNE85_RS25500 () | 32350..32811 | + | 462 | WP_000277845.1 | hypothetical protein | - |
| FNE85_RS25505 () | 32841..33293 | + | 453 | Protein_47 | hypothetical protein | - |
| FNE85_RS25510 () | 33321..33959 | + | 639 | WP_161623801.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| FNE85_RS25515 () | 33956..35764 | + | 1809 | WP_000821821.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| FNE85_RS25520 () | 35791..36048 | + | 258 | WP_000864325.1 | conjugal transfer protein TrbE | - |
| FNE85_RS25525 () | 36041..36784 | + | 744 | WP_001030376.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| FNE85_RS25530 () | 36800..37147 | + | 348 | WP_001287898.1 | conjugal transfer protein TrbA | - |
| FNE85_RS25535 () | 37266..37550 | + | 285 | WP_000624108.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| FNE85_RS25540 () | 37537..38082 | + | 546 | WP_000052618.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| FNE85_RS25545 () | 38012..38374 | + | 363 | WP_001443292.1 | P-type conjugative transfer protein TrbJ | - |
| FNE85_RS25550 () | 38374..39747 | + | 1374 | WP_001137358.1 | conjugal transfer protein TraH | - |
| FNE85_RS25555 () | 39744..42566 | + | 2823 | WP_161623802.1 | conjugal transfer mating pair stabilization protein TraG | - |
| FNE85_RS25560 () | 42582..43067 | + | 486 | WP_000605866.1 | hypothetical protein | - |
| FNE85_RS25565 () | 43116..43847 | + | 732 | WP_000782454.1 | complement resistance protein TraT | - |
| FNE85_RS25570 () | 44100..46325 | + | 2226 | WP_000009363.1 | type IV conjugative transfer system coupling protein TraD | - |
| FNE85_RS25575 () | 46325..51595 | + | 5271 | WP_161623803.1 | Multifunctional conjugation protein TraI | Relaxase |
| FNE85_RS25580 () | 51615..52361 | + | 747 | WP_021518885.1 | conjugal transfer pilus acetylase TraX | - |
| FNE85_RS25585 () | 52420..53280 | + | 861 | WP_000704522.1 | putative protein YcjY | VF |
| FNE85_RS25590 () | 53383..53943 | + | 561 | WP_161623804.1 | fertility inhibition protein FinO | - |
| FNE85_RS25595 () | 54075..54326 | + | 252 | WP_001372275.1 | hypothetical protein | - |
| FNE85_RS25600 () | 54359..55930 | - | 1572 | WP_161623572.1 | IS66 family transposase ISCro1 | Transposase |
| FNE85_RS25605 () | 55950..56297 | - | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| FNE85_RS25610 () | 56297..56974 | - | 678 | WP_096101123.1 | IS66 family transposase ISCro1 | Transposase |
| FNE85_RS25615 () | 57232..57693 | + | 462 | WP_001233868.1 | thermonuclease family protein | - |
| FNE85_RS25620 () | 57739..57948 | + | 210 | WP_001610317.1 | hemolysin expression modulator Hha | - |
| FNE85_RS25625 () | 57986..58576 | + | 591 | WP_161623805.1 | DUF2726 domain-containing protein | - |
| FNE85_RS25630 () | 58816..59070 | + | 255 | WP_000083830.1 | replication regulatory protein RepA | - |
| FNE85_RS25635 () | 59307..59381 | + | 75 | WP_001375168.1 | RepA leader peptide Tap | - |
| FNE85_RS25640 () | 59374..60231 | + | 858 | WP_024236927.1 | incFII family plasmid replication initiator RepA | - |
| FNE85_RS25645 () | 61145..61414 | + | 270 | WP_000079930.1 | hypothetical protein | Antitoxin Detail |
| FNE85_RS25650 () | 61411..61692 | + | 282 | WP_000969996.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| FNE85_RS25960 () | 61727..61981 | + | 255 | Protein_77 | 3'-5' exonuclease | - |
| FNE85_RS25655 () | 62404..63162 | + | 759 | WP_001258298.1 | hypothetical protein | VF |
| FNE85_RS25660 () | 63448..63870 | + | 423 | WP_000202419.1 | DUF4238 domain-containing protein | - |
| FNE85_RS25665 () | 63864..64286 | + | 423 | WP_000883346.1 | hypothetical protein | - |
| FNE85_RS25670 () | 64557..64661 | + | 105 | Protein_81 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| FNE85_RS25675 () | 64777..65127 | - | 351 | WP_000361383.1 | plasmid partitioning/stability family protein | - |
| FNE85_RS25680 () | 65130..66092 | - | 963 | WP_000959875.1 | plasmid segregation protein ParM | - |
| FNE85_RS25685 () | 66239..66532 | + | 294 | WP_032177002.1 | hypothetical protein | - |
| FNE85_RS25690 () | 66608..67291 | + | 684 | WP_000086171.1 | DNA methylase | - |
| FNE85_RS25695 () | 67292..67513 | + | 222 | WP_001464085.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|