MGE detailed information
MGE type: Prophage MGE length: 30340 bp
Accession: NZ_CP041425 Location: 1881188..1911527 Organism: Escherichia coli strain STEC388 Replicon: chromosome
Accession: NZ_CP041425 Location: 1881188..1911527 Organism: Escherichia coli strain STEC388 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FNE85_RS09020 () | 1881637..1882434 | - | 798 | WP_001300307.1 | DgsA anti-repressor MtfA | - |
| FNE85_RS09030 () | 1882834..1883322 | + | 489 | WP_096128842.1 | ImmA/IrrE family metallo-endopeptidase | - |
| FNE85_RS09035 () | 1883334..1883819 | + | 486 | WP_096128843.1 | hypothetical protein | - |
| FNE85_RS09040 () | 1883857..1884864 | - | 1008 | WP_096128844.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| FNE85_RS09045 () | 1884864..1885067 | - | 204 | WP_000096344.1 | DUF4224 domain-containing protein | - |
| FNE85_RS09050 () | 1885126..1887597 | - | 2472 | WP_096128845.1 | exonuclease | - |
| FNE85_RS09055 () | 1887677..1887880 | - | 204 | WP_064484537.1 | DUF1482 family protein | - |
| FNE85_RS09060 () | 1887877..1888065 | - | 189 | WP_064484538.1 | hypothetical protein | - |
| FNE85_RS09065 () | 1888076..1888930 | - | 855 | WP_096128846.1 | Rha family phage regulatory protein | - |
| FNE85_RS25735 () | 1889501..1889776 | + | 276 | WP_000102678.1 | hypothetical protein | - |
| FNE85_RS09075 () | 1889754..1890074 | - | 321 | WP_000394534.1 | hypothetical protein | - |
| FNE85_RS09080 () | 1890097..1890315 | - | 219 | WP_086590109.1 | hypothetical protein | - |
| FNE85_RS09085 () | 1890475..1890630 | - | 156 | WP_001678562.1 | DUF1391 family protein | - |
| FNE85_RS09090 () | 1890923..1891201 | - | 279 | WP_001303511.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| FNE85_RS09095 () | 1891203..1891394 | - | 192 | WP_001302048.1 | hypothetical protein | Antitoxin Detail |
| FNE85_RS09100 () | 1891415..1891786 | - | 372 | WP_001169685.1 | hypothetical protein | - |
| FNE85_RS09105 () | 1891884..1892186 | + | 303 | WP_000172735.1 | transcriptional regulator | - |
| FNE85_RS09110 () | 1892183..1892608 | + | 426 | WP_096128847.1 | Rha family transcriptional regulator | - |
| FNE85_RS09115 () | 1892680..1893699 | + | 1020 | WP_140432539.1 | phage replisome organizer | - |
| FNE85_RS09120 () | 1893611..1894153 | + | 543 | WP_074430107.1 | replication protein | - |
| FNE85_RS09125 () | 1894188..1894949 | + | 762 | WP_140432540.1 | DUF1627 domain-containing protein | - |
| FNE85_RS09130 () | 1894965..1895387 | + | 423 | WP_096128850.1 | DUF977 family protein | - |
| FNE85_RS09135 () | 1895384..1895683 | + | 300 | WP_096128851.1 | DUF4406 domain-containing protein | - |
| FNE85_RS09140 () | 1895730..1896140 | + | 411 | WP_042004587.1 | hypothetical protein | - |
| FNE85_RS09145 () | 1896118..1896474 | + | 357 | WP_001296187.1 | hypothetical protein | - |
| FNE85_RS09150 () | 1896568..1896750 | + | 183 | WP_063103481.1 | hypothetical protein | - |
| FNE85_RS25740 () | 1896743..1896919 | + | 177 | WP_178103013.1 | hypothetical protein | - |
| FNE85_RS09155 () | 1896916..1897275 | + | 360 | WP_061092229.1 | hypothetical protein | - |
| FNE85_RS09160 () | 1897276..1897485 | + | 210 | WP_032313438.1 | hypothetical protein | - |
| FNE85_RS09165 () | 1897482..1898054 | + | 573 | WP_096129426.1 | DUF551 domain-containing protein | - |
| FNE85_RS09170 () | 1898326..1898481 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| FNE85_RS09175 () | 1898649..1898921 | + | 273 | WP_032231033.1 | hypothetical protein | - |
| FNE85_RS09180 () | 1898923..1899981 | + | 1059 | WP_096129427.1 | DUF968 domain-containing protein | - |
| FNE85_RS09185 () | 1899982..1900347 | + | 366 | WP_000139994.1 | RusA family crossover junction endodeoxyribonuclease | - |
| FNE85_RS09190 () | 1900344..1901009 | + | 666 | WP_047662436.1 | antiterminator | - |
| FNE85_RS09195 () | 1901264..1901977 | + | 714 | WP_057108854.1 | hypothetical protein | - |
| FNE85_RS09200 () | 1902151..1902348 | + | 198 | WP_000917767.1 | hypothetical protein | - |
| FNE85_RS09205 () | 1902485..1903198 | + | 714 | WP_096129428.1 | helix-turn-helix domain-containing protein | - |
| FNE85_RS09225 () | 1903568..1904527 | + | 960 | WP_096129429.1 | Shiga toxin subunit A | VF |
| FNE85_RS09230 () | 1904539..1904808 | + | 270 | WP_000738076.1 | Shiga toxin subunit B | VF |
| FNE85_RS09235 () | 1904996..1905319 | - | 324 | WP_096129430.1 | anti-adapter protein IraM | - |
| FNE85_RS09240 () | 1905585..1905800 | + | 216 | WP_000284510.1 | class II holin family protein | - |
| FNE85_RS09245 () | 1905805..1906119 | + | 315 | WP_000193273.1 | YdfR family protein | - |
| FNE85_RS09250 () | 1906175..1906708 | + | 534 | WP_001274712.1 | lysozyme | - |
| FNE85_RS25745 () | 1906868..1907005 | + | 138 | WP_000459345.1 | hypothetical protein | - |
| FNE85_RS09255 () | 1907007..1907471 | + | 465 | WP_001082535.1 | lysis protein | - |
| FNE85_RS09260 () | 1907779..1908057 | - | 279 | Protein_1806 | DUF1398 family protein | - |
| FNE85_RS09265 () | 1908113..1908810 | + | 698 | Protein_1807 | IS1 family transposase IS1R | Transposase |
| FNE85_RS09270 () | 1909063..1910031 | - | 969 | WP_096129526.1 | IS5 family transposase IS903B | Transposase |
| FNE85_RS09275 () | 1910170..1911210 | + | 1041 | WP_161623748.1 | phage tail protein | - |
| FNE85_RS09280 () | 1911295..1911527 | + | 233 | Protein_1810 | hypothetical protein | - |
| FNE85_RS09285 () | 1911568..1911666 | + | 99 | Protein_1811 | tail fiber assembly protein | - |
| FNE85_RS09290 () | 1912644..1913174 | - | 531 | WP_001079074.1 | cytochrome b | - |
| FNE85_RS09295 () | 1913517..1914167 | - | 651 | WP_001007789.1 | metal-binding protein ZinT | - |
| FNE85_RS09300 () | 1914424..1915059 | - | 636 | WP_096129279.1 | protein-methionine-sulfoxide reductase heme-binding subunit MsrQ | - |
| FNE85_RS09305 () | 1915060..1916064 | - | 1005 | WP_032197953.1 | protein-methionine-sulfoxide reductase catalytic subunit MsrP | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|