MGE detailed information
MGE type: Prophage MGE length: 56653 bp
Accession: NZ_CP041422 Location: 4229626..4286278 Organism: Escherichia coli strain STEC409 Replicon: chromosome
Accession: NZ_CP041422 Location: 4229626..4286278 Organism: Escherichia coli strain STEC409 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FNE86_RS20560 () | 4224701..4225117 | - | 417 | WP_000270375.1 | secondary thiamine-phosphate synthase enzyme YjbQ | - |
| FNE86_RS20565 () | 4225228..4225941 | - | 714 | WP_001226928.1 | acid phosphatase AphA | - |
| FNE86_RS23935 () | 4226343..4226546 | + | 204 | WP_001321562.1 | hypothetical protein | - |
| FNE86_RS20575 () | 4227048..4228241 | - | 1194 | WP_000486985.1 | aromatic amino acid transaminase | - |
| FNE86_RS20580 () | 4228494..4229573 | - | 1080 | WP_001147328.1 | alanine racemase | - |
| FNE86_RS20585 () | 4229626..4231041 | - | 1416 | WP_000918363.1 | replicative DNA helicase | - |
| FNE86_RS20590 () | 4231124..4232107 | + | 984 | WP_000235509.1 | Quinone oxidoreductase 1 | VF |
| FNE86_RS20595 () | 4232273..4232515 | - | 243 | WP_000891404.1 | envelope stress response protein PspG | - |
| FNE86_RS20600 () | 4232649..4233686 | - | 1038 | WP_023277396.1 | tRNA dihydrouridine(20/20a) synthase DusA | - |
| FNE86_RS20605 () | 4233775..4234872 | + | 1098 | WP_000332269.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| FNE86_RS20610 () | 4234934..4235182 | + | 249 | WP_001217553.1 | DinI-like family protein | - |
| FNE86_RS20615 () | 4235290..4235853 | - | 564 | WP_032083574.1 | DUF4376 domain-containing protein | - |
| FNE86_RS20620 () | 4235853..4237856 | - | 2004 | WP_161620516.1 | prophage tail fiber N-terminal domain-containing protein | - |
| FNE86_RS20625 () | 4237881..4238969 | - | 1089 | WP_032083596.1 | phage late control protein | - |
| FNE86_RS20630 () | 4238960..4239178 | - | 219 | WP_032083597.1 | tail protein X | - |
| FNE86_RS20635 () | 4239153..4239641 | - | 489 | WP_032083598.1 | phage tail protein | - |
| FNE86_RS20640 () | 4239644..4241296 | - | 1653 | WP_161620515.1 | hypothetical protein | - |
| FNE86_RS20645 () | 4241414..4241716 | - | 303 | WP_001291421.1 | phage tail assembly protein | - |
| FNE86_RS20650 () | 4241776..4242294 | - | 519 | WP_000988219.1 | phage major tail tube protein | - |
| FNE86_RS20655 () | 4242291..4243766 | - | 1476 | WP_000015654.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| FNE86_RS20660 () | 4243821..4244366 | - | 546 | WP_032083600.1 | tail fiber assembly protein | - |
| FNE86_RS20665 () | 4244369..4245586 | - | 1218 | WP_032083601.1 | phage tail protein | - |
| FNE86_RS20670 () | 4245583..4246173 | - | 591 | WP_032083602.1 | phage tail protein I | - |
| FNE86_RS20675 () | 4246166..4247080 | - | 915 | WP_000235848.1 | baseplate J/gp47 family protein | - |
| FNE86_RS20680 () | 4247055..4247411 | - | 357 | WP_000579231.1 | GPW/gp25 family protein | - |
| FNE86_RS20685 () | 4247445..4248068 | - | 624 | WP_000049992.1 | phage baseplate assembly protein V | - |
| FNE86_RS20690 () | 4248052..4248603 | - | 552 | WP_001406275.1 | hypothetical protein | - |
| FNE86_RS20695 () | 4248615..4249337 | - | 723 | WP_032083603.1 | hypothetical protein | - |
| FNE86_RS20700 () | 4249318..4249719 | - | 402 | WP_096968565.1 | hypothetical protein | - |
| FNE86_RS20705 () | 4249722..4250087 | - | 366 | WP_096934544.1 | DNA breaking-rejoining protein | - |
| FNE86_RS20710 () | 4250138..4251166 | - | 1029 | WP_096934545.1 | major capsid protein | - |
| FNE86_RS20715 () | 4251236..4251571 | - | 336 | WP_000598339.1 | head decoration protein | - |
| FNE86_RS20720 () | 4251610..4253226 | - | 1617 | WP_161620513.1 | S49 family peptidase | - |
| FNE86_RS20725 () | 4253216..4254739 | - | 1524 | WP_161620415.1 | phage portal protein | - |
| FNE86_RS20730 () | 4254784..4254993 | - | 210 | WP_000263126.1 | gpW family protein | - |
| FNE86_RS20735 () | 4254997..4256913 | - | 1917 | WP_161620341.1 | phage terminase large subunit family protein | - |
| FNE86_RS20740 () | 4256885..4257394 | - | 510 | WP_136769147.1 | terminase small subunit | - |
| FNE86_RS20745 () | 4257868..4258143 | - | 276 | WP_136769154.1 | hypothetical protein | - |
| FNE86_RS23940 () | 4258318..4258500 | - | 183 | WP_134232672.1 | hypothetical protein | - |
| FNE86_RS20750 () | 4258658..4258840 | - | 183 | WP_001233884.1 | hypothetical protein | - |
| FNE86_RS20755 () | 4258913..4259194 | - | 282 | WP_161620545.1 | hypothetical protein | - |
| FNE86_RS20760 () | 4259265..4259642 | - | 378 | WP_161619109.1 | M15 family metallopeptidase | - |
| FNE86_RS20765 () | 4259645..4259920 | - | 276 | WP_161620546.1 | phage holin family protein | - |
| FNE86_RS20770 () | 4259910..4260302 | - | 393 | WP_097449971.1 | holin | - |
| FNE86_RS20775 () | 4260481..4260753 | + | 273 | WP_097449972.1 | hypothetical protein | - |
| FNE86_RS20780 () | 4260719..4261063 | - | 345 | WP_097449973.1 | YdfR family protein | - |
| FNE86_RS20785 () | 4261068..4261283 | - | 216 | WP_097449974.1 | class II holin family protein | - |
| FNE86_RS20790 () | 4261549..4261872 | + | 324 | WP_096129430.1 | anti-adapter protein IraM | - |
| FNE86_RS20795 () | 4262060..4262329 | - | 270 | WP_000738076.1 | Shiga toxin subunit B | VF |
| FNE86_RS20800 () | 4262341..4263300 | - | 960 | WP_161620547.1 | Shiga toxin subunit A | VF |
| FNE86_RS20820 () | 4263670..4264383 | - | 714 | WP_097449976.1 | helix-turn-helix domain-containing protein | - |
| FNE86_RS20825 () | 4264520..4264717 | - | 198 | WP_000917767.1 | hypothetical protein | - |
| FNE86_RS20830 () | 4264891..4265604 | - | 714 | WP_057108854.1 | hypothetical protein | - |
| FNE86_RS20835 () | 4265859..4266524 | - | 666 | WP_136769106.1 | antiterminator | - |
| FNE86_RS20840 () | 4266521..4266880 | - | 360 | WP_136769107.1 | RusA family crossover junction endodeoxyribonuclease | - |
| FNE86_RS20845 () | 4266893..4267882 | - | 990 | WP_136769108.1 | DUF968 domain-containing protein | - |
| FNE86_RS20850 () | 4267890..4268699 | - | 810 | WP_001061438.1 | KilA-N domain-containing protein | - |
| FNE86_RS20855 () | 4268719..4269108 | - | 390 | WP_000767141.1 | RusA family crossover junction endodeoxyribonuclease | - |
| FNE86_RS20860 () | 4269105..4269431 | - | 327 | WP_000210169.1 | LexA family transcriptional regulator | - |
| FNE86_RS20865 () | 4269475..4270080 | - | 606 | Protein_4083 | phage N-6-adenine-methyltransferase | - |
| FNE86_RS20870 () | 4270080..4270574 | - | 495 | WP_072127929.1 | PerC family transcriptional regulator | - |
| FNE86_RS20875 () | 4270571..4271389 | - | 819 | WP_161620548.1 | helix-turn-helix domain-containing protein | - |
| FNE86_RS20880 () | 4271386..4271610 | - | 225 | WP_000620696.1 | hypothetical protein | - |
| FNE86_RS20885 () | 4271607..4272758 | - | 1152 | WP_136769109.1 | Rha family phage regulatory protein | - |
| FNE86_RS20890 () | 4272755..4273306 | - | 552 | WP_000515862.1 | hypothetical protein | - |
| FNE86_RS20895 () | 4273299..4273559 | - | 261 | WP_001191669.1 | helix-turn-helix transcriptional regulator | - |
| FNE86_RS20900 () | 4273657..4274349 | + | 693 | WP_001345148.1 | helix-turn-helix transcriptional regulator | - |
| FNE86_RS20905 () | 4275073..4275435 | + | 363 | WP_000135680.1 | hypothetical protein | - |
| FNE86_RS20910 () | 4275501..4276325 | + | 825 | WP_097455378.1 | YfdQ family protein | - |
| FNE86_RS20915 () | 4276454..4276990 | + | 537 | WP_000008178.1 | 5'-deoxynucleotidase | - |
| FNE86_RS20920 () | 4276981..4277343 | + | 363 | WP_097455379.1 | hypothetical protein | - |
| FNE86_RS20925 () | 4277340..4277543 | + | 204 | WP_000111289.1 | hypothetical protein | - |
| FNE86_RS20930 () | 4277536..4277775 | + | 240 | WP_000476211.1 | hypothetical protein | - |
| FNE86_RS20935 () | 4277772..4278026 | + | 255 | WP_027661982.1 | hypothetical protein | - |
| FNE86_RS20940 () | 4278019..4278327 | + | 309 | Protein_4098 | hypothetical protein | - |
| FNE86_RS20945 () | 4278393..4279355 | + | 963 | WP_136769110.1 | ead/Ea22-like family protein | - |
| FNE86_RS20950 () | 4279355..4279927 | + | 573 | WP_136769111.1 | 3'-5' exoribonuclease | - |
| FNE86_RS20955 () | 4279964..4280236 | + | 273 | WP_001093911.1 | pyocin activator PrtN family protein | - |
| FNE86_RS20960 () | 4280270..4280818 | - | 549 | WP_053878051.1 | hypothetical protein | Toxin Detail |
| FNE86_RS20965 () | 4280841..4281314 | - | 474 | WP_059242328.1 | SocA family protein | Antitoxin Detail |
| FNE86_RS20970 () | 4281602..4281724 | - | 123 | WP_001300034.1 | hypothetical protein | - |
| FNE86_RS20975 () | 4282087..4283072 | - | 986 | Protein_4105 | DUF2713 domain-containing protein | - |
| FNE86_RS20985 () | 4283390..4283905 | + | 516 | WP_001295691.1 | zinc uptake transcriptional repressor Zur | - |
| FNE86_RS20990 () | 4283947..4284156 | - | 210 | WP_001030593.1 | CsbD family protein | - |
| FNE86_RS20995 () | 4284272..4285597 | - | 1326 | WP_137465937.1 | MATE family efflux transporter DinF | - |
| FNE86_RS21000 () | 4285670..4286278 | - | 609 | WP_000646078.1 | transcriptional repressor LexA | - |
| FNE86_RS21005 () | 4286388..4286756 | - | 369 | WP_000002907.1 | diacylglycerol kinase | - |
| FNE86_RS21010 () | 4286927..4289350 | + | 2424 | WP_000017354.1 | glycerol-3-phosphate 1-O-acyltransferase PlsB | - |
| FNE86_RS21015 () | 4289505..4290377 | - | 873 | WP_000455227.1 | 4-hydroxybenzoate octaprenyltransferase | - |
| FNE86_RS21020 () | 4290390..4290887 | - | 498 | WP_001295693.1 | chorismate lyase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|