MGE detailed information
MGE type: Conjugative plasmid MGE length: 84140 bp
Accession: NZ_CP041414 Location: 1..84140 Organism: Escherichia coli strain STEC719 Replicon: plasmid pSTEC719_3
Accession: NZ_CP041414 Location: 1..84140 Organism: Escherichia coli strain STEC719 Replicon: plasmid pSTEC719_3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FNE88_RS24755 () | 659..1042 | + | 384 | WP_040100321.1 | relaxosome protein TraM | - |
| FNE88_RS24760 () | 2049..2276 | + | 228 | WP_072039828.1 | conjugal transfer relaxosome protein TraY | - |
| FNE88_RS24765 () | 2310..2675 | + | 366 | WP_040100313.1 | type IV conjugative transfer system pilin TraA | - |
| FNE88_RS24770 () | 2690..3001 | + | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| FNE88_RS24775 () | 3023..3590 | + | 568 | Protein_5 | type IV conjugative transfer system protein TraE | - |
| FNE88_RS24780 () | 3577..4306 | + | 730 | Protein_6 | type-F conjugative transfer system secretin TraK | - |
| FNE88_RS24785 () | 4306..5733 | + | 1428 | WP_000146635.1 | conjugal transfer protein TraB | - |
| FNE88_RS24790 () | 5723..6314 | + | 592 | Protein_8 | conjugal transfer protein TraP | - |
| FNE88_RS24795 () | 6253..6621 | + | 369 | WP_105466870.1 | conjugal transfer protein TrbD | - |
| FNE88_RS24800 () | 6618..7133 | + | 516 | WP_105466871.1 | type IV conjugative transfer system lipoprotein TraV | - |
| FNE88_RS24805 () | 7267..7488 | + | 222 | WP_105466872.1 | conjugal transfer protein TraR | - |
| FNE88_RS24810 () | 7481..7955 | + | 475 | Protein_12 | hypothetical protein | - |
| FNE88_RS24815 () | 8035..8253 | + | 219 | WP_001377841.1 | hypothetical protein | - |
| FNE88_RS24820 () | 8250..8654 | + | 405 | WP_105466874.1 | hypothetical protein | - |
| FNE88_RS24825 () | 8651..8998 | + | 348 | WP_105466875.1 | hypothetical protein | - |
| FNE88_RS24830 () | 9124..11769 | + | 2646 | WP_105466876.1 | type IV secretion system protein TraC | - |
| FNE88_RS24835 () | 11792..12208 | + | 417 | WP_124062645.1 | hypothetical protein | - |
| FNE88_RS24840 () | 12152..13258 | - | 1107 | WP_040100307.1 | hypothetical protein | - |
| FNE88_RS24845 () | 13342..13722 | + | 381 | WP_040100306.1 | type-F conjugative transfer system protein TrbI | - |
| FNE88_RS24850 () | 13719..14351 | + | 633 | WP_040100303.1 | type-F conjugative transfer system protein TraW | - |
| FNE88_RS24855 () | 14348..15340 | + | 993 | WP_040100302.1 | conjugal transfer pilus assembly protein TraU | - |
| FNE88_RS24860 () | 15349..15987 | + | 639 | WP_000777692.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| FNE88_RS24865 () | 15984..17792 | + | 1809 | WP_000821840.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| FNE88_RS24870 () | 17819..18076 | + | 258 | WP_053264198.1 | conjugal transfer protein TrbE | - |
| FNE88_RS24875 () | 18069..18812 | + | 744 | WP_001030378.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| FNE88_RS24880 () | 18928..19209 | + | 282 | WP_000549793.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| FNE88_RS24885 () | 19196..19741 | + | 546 | WP_000059821.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| FNE88_RS24890 () | 19671..20012 | + | 342 | WP_161622486.1 | P-type conjugative transfer protein TrbJ | - |
| FNE88_RS24895 () | 19966..20391 | + | 426 | WP_161622512.1 | F-type conjugal transfer protein TrbF | - |
| FNE88_RS24900 () | 20378..21751 | + | 1374 | WP_077170481.1 | conjugal transfer protein TraH | - |
| FNE88_RS24905 () | 21748..24567 | + | 2820 | WP_151674034.1 | conjugal transfer mating pair stabilization protein TraG | - |
| FNE88_RS24910 () | 24592..25089 | + | 498 | WP_137546094.1 | surface exclusion protein | - |
| FNE88_RS24915 () | 25121..25852 | + | 732 | WP_000850424.1 | complement resistance protein TraT | - |
| FNE88_RS24920 () | 26055..26795 | + | 741 | WP_151674032.1 | hypothetical protein | - |
| FNE88_RS24925 () | 26846..29071 | + | 2226 | WP_161622487.1 | type IV conjugative transfer system coupling protein TraD | - |
| FNE88_RS24930 () | 29071..34341 | + | 5271 | WP_161622488.1 | Multifunctional conjugation protein TraI | Relaxase |
| FNE88_RS24935 () | 34361..35101 | + | 741 | WP_161622489.1 | conjugal transfer pilus acetylase TraX | - |
| FNE88_RS24940 () | 35156..35716 | + | 561 | WP_161622490.1 | fertility inhibition protein FinO | - |
| FNE88_RS24945 () | 36929..37486 | + | 558 | WP_161622491.1 | hypothetical protein | - |
| FNE88_RS24950 () | 37881..38342 | + | 462 | WP_160521639.1 | thermonuclease family protein | - |
| FNE88_RS24955 () | 38388..38597 | + | 210 | WP_001299729.1 | hemolysin expression modulator Hha | - |
| FNE88_RS24960 () | 38635..39225 | + | 591 | WP_160521640.1 | DUF2726 domain-containing protein | - |
| FNE88_RS24965 () | 39380..39844 | + | 465 | WP_160521641.1 | hypothetical protein | - |
| - () | 39996..40052 | - | 57 | NuclAT_1 | - | - |
| - () | 39996..40052 | - | 57 | NuclAT_1 | - | - |
| - () | 39996..40052 | - | 57 | NuclAT_1 | - | - |
| - () | 39996..40052 | - | 57 | NuclAT_1 | - | - |
| FNE88_RS24970 () | 40100..40249 | + | 150 | WP_001312851.1 | type I toxin-antitoxin system Hok family toxin | - |
| FNE88_RS24975 () | 40534..40794 | + | 261 | WP_005768671.1 | replication regulatory protein RepA | - |
| FNE88_RS24980 () | 41019..41093 | + | 75 | WP_032319616.1 | RepA leader peptide Tap | - |
| FNE88_RS24985 () | 41086..42108 | + | 1023 | WP_061330039.1 | replication initiation protein | - |
| FNE88_RS24990 () | 43027..43236 | + | 210 | Protein_48 | DUF1778 domain-containing protein | - |
| FNE88_RS24995 () | 43419..44606 | - | 1188 | WP_001398473.1 | IS91 family transposase ISEc37 | Transposase |
| FNE88_RS25000 () | 44613..44978 | - | 366 | WP_000124089.1 | hypothetical protein | - |
| FNE88_RS25005 () | 45060..45646 | + | 587 | Protein_51 | IS5 family transposase ISSfl7 | Transposase |
| FNE88_RS25010 () | 46450..47007 | + | 558 | WP_161622492.1 | hypothetical protein | VF |
| FNE88_RS25015 () | 47145..49571 | + | 2427 | WP_052993169.1 | Outer membrane usher protein FimD | VF |
| FNE88_RS25020 () | 49564..50259 | + | 696 | WP_052993168.1 | Chaperone protein FaeE | VF |
| FNE88_RS25025 () | 50299..51003 | + | 705 | WP_161622493.1 | Chaperone protein FaeE | VF |
| FNE88_RS25030 () | 51000..51572 | + | 573 | WP_161622494.1 | hypothetical protein | - |
| FNE88_RS25035 () | 51586..52098 | + | 513 | WP_161622495.1 | hypothetical protein | - |
| FNE88_RS25040 () | 52108..52635 | + | 528 | WP_148997646.1 | hypothetical protein | - |
| FNE88_RS25045 () | 52632..53588 | + | 957 | Protein_59 | hypothetical protein | VF |
| FNE88_RS25050 () | 53730..54323 | + | 594 | WP_161622496.1 | hypothetical protein | - |
| FNE88_RS25055 () | 54600..54833 | + | 234 | WP_161622513.1 | hypothetical protein | VF |
| FNE88_RS25060 () | 55166..56395 | + | 1230 | WP_052993163.1 | phosphoadenosine phosphosulfate reductase | - |
| FNE88_RS25065 () | 56380..57024 | + | 645 | WP_052993162.1 | ParB/RepB/Spo0J family partition protein | - |
| FNE88_RS25070 () | 57094..57369 | + | 276 | WP_052993161.1 | PerC family transcriptional regulator | - |
| FNE88_RS25075 () | 57575..58129 | + | 555 | WP_161622497.1 | Transcriptional regulatory protein UhpA | VF |
| FNE88_RS25080 () | 58325..58549 | - | 225 | Protein_66 | transposase domain-containing protein | - |
| FNE88_RS25085 () | 58790..58975 | - | 186 | Protein_67 | IS3 family transposase | - |
| FNE88_RS25090 () | 59006..59683 | + | 678 | WP_001339397.1 | IS66 family transposase ISCro1 | Transposase |
| FNE88_RS25095 () | 59683..60030 | + | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| FNE88_RS25100 () | 60050..61621 | + | 1572 | WP_000381395.1 | IS66 family transposase ISCro1 | Transposase |
| FNE88_RS25105 () | 61650..62710 | - | 1061 | Protein_71 | IS3 family transposase IS629 | Transposase |
| FNE88_RS25110 () | 62770..63495 | + | 726 | WP_033800815.1 | IS21-like element ISEc12 family helper ATPase IstB | - |
| FNE88_RS25115 () | 63865..64083 | + | 219 | WP_000862856.1 | hypothetical protein | - |
| FNE88_RS25120 () | 64151..64359 | - | 209 | Protein_74 | transposase domain-containing protein | - |
| FNE88_RS25125 () | 64426..64824 | + | 399 | Protein_75 | transposase | - |
| FNE88_RS25130 () | 65017..65346 | + | 330 | WP_000493287.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| FNE88_RS25135 () | 65327..65608 | + | 282 | WP_000780220.1 | helix-turn-helix transcriptional regulator | - |
| FNE88_RS25140 () | 65931..66875 | + | 945 | WP_161622499.1 | HNH endonuclease | - |
| FNE88_RS25145 () | 66942..67292 | - | 351 | WP_001393279.1 | plasmid partitioning/stability family protein | - |
| FNE88_RS25150 () | 67295..68257 | - | 963 | WP_000959884.1 | plasmid segregation protein ParM | - |
| FNE88_RS25155 () | 68793..69695 | + | 903 | WP_161622514.1 | DUF1281 domain-containing protein | - |
| FNE88_RS25160 () | 69692..70004 | + | 313 | Protein_82 | hypothetical protein | - |
| FNE88_RS25165 () | 70080..70571 | + | 492 | WP_161622500.1 | adenine-specific DNA-methyltransferase | - |
| FNE88_RS25170 () | 70651..70842 | + | 192 | WP_001027519.1 | hypothetical protein | - |
| FNE88_RS25175 () | 71879..72109 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| FNE88_RS25180 () | 72161..73522 | + | 1362 | WP_161622501.1 | DUF3560 domain-containing protein | - |
| FNE88_RS25185 () | 73570..74133 | + | 564 | WP_161622502.1 | class I SAM-dependent methyltransferase | - |
| FNE88_RS25945 () | 74219..74662 | - | 444 | WP_178085955.1 | hypothetical protein | - |
| FNE88_RS25950 () | 74732..74938 | + | 207 | WP_061361210.1 | hypothetical protein | - |
| FNE88_RS25195 () | 74964..75500 | + | 537 | WP_161622503.1 | single-stranded DNA-binding protein | - |
| FNE88_RS25200 () | 75558..75791 | + | 234 | WP_161622504.1 | DUF905 family protein | - |
| FNE88_RS25205 () | 75861..77825 | + | 1965 | WP_161622505.1 | ParB/RepB/Spo0J family partition protein | - |
| FNE88_RS25210 () | 77894..78328 | + | 435 | WP_050940544.1 | conjugation system SOS inhibitor PsiB | - |
| FNE88_RS25215 () | 78325..79044 | + | 720 | WP_161622506.1 | plasmid SOS inhibition protein A | - |
| FNE88_RS25220 () | 79044..79562 | + | 519 | WP_161622507.1 | hypothetical protein | - |
| - () | 79538..79672 | + | 135 | NuclAT_0 | - | Antitoxin Detail |
| - () | 79538..79672 | + | 135 | NuclAT_0 | - | Antitoxin Detail |
| - () | 79538..79672 | + | 135 | NuclAT_0 | - | Antitoxin Detail |
| - () | 79538..79672 | + | 135 | NuclAT_0 | - | Antitoxin Detail |
| FNE88_RS25225 () | 79738..79899 | + | 162 | WP_000775238.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| FNE88_RS25955 () | 80575..80778 | + | 204 | Protein_97 | single-stranded DNA-binding protein | - |
| FNE88_RS25235 () | 80801..81124 | + | 324 | WP_161622508.1 | hypothetical protein | - |
| FNE88_RS25240 () | 81183..81425 | + | 243 | WP_161622509.1 | hypothetical protein | - |
| FNE88_RS25960 () | 82121..82327 | + | 207 | WP_061361210.1 | hypothetical protein | - |
| FNE88_RS25255 () | 82351..82647 | + | 297 | WP_001272251.1 | hypothetical protein | - |
| FNE88_RS25260 () | 82757..83578 | + | 822 | WP_001234447.1 | DUF945 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|