MGE detailed information
MGE type: Prophage MGE length: 37046 bp
Accession: NZ_CP041304 Location: 348389..385434 Organism: Escherichia coli strain MSHS 133 Replicon: chromosome
Accession: NZ_CP041304 Location: 348389..385434 Organism: Escherichia coli strain MSHS 133 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FK544_RS02690 () | 344259..345452 | + | 1194 | WP_000439204.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| FK544_RS02695 () | 345539..346591 | - | 1053 | WP_001318089.1 | DUF2776 family protein | - |
| FK544_RS25770 () | 347149..347262 | + | 114 | WP_001304942.1 | protein YhiY | - |
| FK544_RS02705 () | 347325..348392 | + | 1068 | WP_000361470.1 | HlyD family secretion protein | - |
| FK544_RS02710 () | 348389..351124 | + | 2736 | WP_000149178.1 | hypothetical protein | VF |
| FK544_RS02715 () | 351124..352248 | + | 1125 | WP_001318088.1 | ABC transporter permease | - |
| FK544_RS02720 () | 352321..352596 | + | 276 | WP_001260301.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| FK544_RS02725 () | 352593..352952 | + | 360 | WP_000593557.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| FK544_RS02730 () | 353072..353473 | - | 402 | WP_001190062.1 | nickel-responsive transcriptional regulator NikR | - |
| FK544_RS02735 () | 353479..354285 | - | 807 | WP_000173650.1 | hypothetical protein | VF |
| FK544_RS02740 () | 354282..355046 | - | 765 | WP_001136206.1 | nickel import ATP-binding protein NikD | - |
| FK544_RS02745 () | 355046..355879 | - | 834 | WP_001008963.1 | nickel ABC transporter permease subunit NikC | - |
| FK544_RS02750 () | 355876..356820 | - | 945 | WP_000947063.1 | nickel ABC transporter permease subunit NikB | - |
| FK544_RS02755 () | 356820..358394 | - | 1575 | WP_039003979.1 | nickel ABC transporter substrate-binding protein | - |
| FK544_RS02760 () | 358505..359092 | - | 588 | WP_000285764.1 | hypothetical protein | VF |
| FK544_RS02765 () | 359147..360196 | - | 1050 | WP_001297848.1 | AI-2E family transporter | - |
| FK544_RS02770 () | 360295..361545 | + | 1251 | WP_001298004.1 | MFS transporter | - |
| FK544_RS02775 () | 361549..362106 | - | 558 | WP_001245296.1 | phage sensitivity protein DcrB | - |
| FK544_RS02780 () | 362179..362844 | - | 666 | WP_001100463.1 | 7-cyano-7-deazaguanine/7-aminomethyl-7- deazaguanine transporter | - |
| FK544_RS02785 () | 363066..363311 | + | 246 | WP_000130619.1 | sulfurtransferase TusA | - |
| FK544_RS02790 () | 363580..365778 | - | 2199 | WP_000106587.1 | Zn(II)/Cd(II)/Pb(II) translocating P-type ATPase ZntA | - |
| FK544_RS02795 () | 365852..366478 | - | 627 | WP_000964718.1 | lysoplasmalogenase | - |
| FK544_RS02800 () | 366619..366978 | + | 360 | WP_000042885.1 | DUF2500 domain-containing protein | - |
| FK544_RS02805 () | 366981..367250 | - | 270 | WP_001295207.1 | DUF1145 family protein | - |
| FK544_RS02810 () | 367240..367836 | - | 597 | WP_000743193.1 | 16S rRNA (guanine(966)-N(2))-methyltransferase | - |
| FK544_RS02815 () | 367986..369482 | + | 1497 | WP_001040613.1 | hypothetical protein | VF |
| FK544_RS02820 () | 369485..370153 | + | 669 | WP_000617723.1 | hypothetical protein | VF |
| FK544_RS02825 () | 370146..371204 | + | 1059 | WP_001042003.1 | permease-like cell division protein FtsX | - |
| FK544_RS02830 () | 371449..372303 | + | 855 | WP_000130217.1 | RNA polymerase sigma factor RpoH | - |
| FK544_RS02835 () | 372575..373678 | + | 1104 | WP_001021996.1 | branched chain amino acid ABC transporter substrate-binding protein LivJ | - |
| FK544_RS02840 () | 373866..374249 | - | 384 | WP_000778791.1 | aspartate 1-decarboxylase autocleavage activator PanM | - |
| FK544_RS02845 () | 374673..375782 | + | 1110 | WP_001318085.1 | high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK | - |
| FK544_RS02850 () | 375830..376756 | + | 927 | WP_000003010.1 | high-affinity branched-chain amino acid ABC transporter permease LivH | - |
| FK544_RS02855 () | 376753..378030 | + | 1278 | WP_000803825.1 | branched chain amino acid ABC transporter permease LivM | - |
| FK544_RS02860 () | 378027..378794 | + | 768 | WP_000082101.1 | hypothetical protein | VF |
| FK544_RS02865 () | 378796..379509 | + | 714 | WP_000416895.1 | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF | - |
| FK544_RS02870 () | 379597..379818 | + | 222 | WP_000557315.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| FK544_RS02875 () | 379815..380192 | + | 378 | WP_000155159.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| FK544_RS02880 () | 380401..381717 | + | 1317 | WP_000803191.1 | sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB | - |
| FK544_RS02885 () | 381893..382780 | + | 888 | WP_000099289.1 | sn-glycerol-3-phosphate ABC transporter permease UgpA | - |
| FK544_RS02890 () | 382777..383622 | + | 846 | WP_000572164.1 | sn-glycerol-3-phosphate ABC transporter permease UgpE | - |
| FK544_RS02895 () | 383624..384694 | + | 1071 | WP_000907828.1 | hypothetical protein | VF |
| FK544_RS02900 () | 384691..385434 | + | 744 | WP_000073619.1 | glycerophosphodiester phosphodiesterase | - |
| FK544_RS02905 () | 385421..385861 | - | 441 | WP_000825996.1 | DUF2756 family protein | - |
| FK544_RS02910 () | 385981..387726 | + | 1746 | WP_001696277.1 | gamma-glutamyltransferase | - |
| FK544_RS02915 () | 387786..388274 | - | 489 | WP_001318084.1 | N-acetyltransferase | - |
| FK544_RS02920 () | 388608..389645 | + | 1038 | WP_000236278.1 | oxidoreductase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|