MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 158212 bp
Accession: NZ_CP041209 Location: 1..158212 Organism: Salmonella enterica subsp. enterica serovar Newport strain SAP18-8729 Replicon: plasmid pCFSAN074384_1
Accession: NZ_CP041209 Location: 1..158212 Organism: Salmonella enterica subsp. enterica serovar Newport strain SAP18-8729 Replicon: plasmid pCFSAN074384_1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D2X89_RS23555 () | 116..1429 | + | 1314 | WP_024131605.1 | conjugal transfer protein TraB | - |
| D2X89_RS23560 () | 1426..2004 | + | 579 | WP_000793435.1 | type IV conjugative transfer system lipoprotein TraV | - |
| D2X89_RS23565 () | 2008..2400 | + | 393 | WP_000479535.1 | hypothetical protein | - |
| D2X89_RS23570 () | 2685..3644 | + | 960 | Protein_4 | IS1380-like element ISEc9 family transposase | - |
| D2X89_RS23575 () | 3644..4345 | - | 702 | Protein_5 | conjugal transfer protein TraC | - |
| D2X89_RS23580 () | 4342..5049 | - | 708 | WP_001259346.1 | DsbC family protein | - |
| D2X89_RS23585 () | 5198..10683 | - | 5486 | Protein_7 | DUF4165 domain-containing protein | - |
| D2X89_RS23595 () | 11411..11728 | + | 318 | WP_000118520.1 | quaternary ammonium compound efflux SMR transporter SugE | - |
| D2X89_RS23600 () | 11725..12258 | - | 534 | WP_001221666.1 | lipocalin family protein | - |
| D2X89_RS23605 () | 12352..13497 | - | 1146 | WP_000976514.1 | class C beta-lactamase CMY-2 | - |
| D2X89_RS23610 () | 13821..14129 | - | 309 | Protein_11 | IS1380 family transposase | - |
| D2X89_RS23615 () | 14316..15578 | + | 1263 | WP_000608644.1 | IS1380-like element ISEc9 family transposase | - |
| D2X89_RS23620 () | 15902..17047 | + | 1146 | WP_000976514.1 | class C beta-lactamase CMY-2 | - |
| D2X89_RS23625 () | 17141..17674 | + | 534 | WP_001221666.1 | lipocalin family protein | - |
| D2X89_RS23630 () | 17671..17988 | - | 318 | WP_000118520.1 | quaternary ammonium compound efflux SMR transporter SugE | - |
| D2X89_RS23640 () | 18716..24202 | + | 5487 | WP_000606835.1 | DUF4165 domain-containing protein | - |
| D2X89_RS23645 () | 24351..25058 | + | 708 | WP_001259346.1 | DsbC family protein | - |
| D2X89_RS23650 () | 25055..27502 | + | 2448 | WP_000637384.1 | type IV secretion system protein TraC | - |
| D2X89_RS23655 () | 27517..27834 | + | 318 | WP_000351984.1 | hypothetical protein | - |
| D2X89_RS23660 () | 27831..28361 | + | 531 | WP_001010740.1 | S26 family signal peptidase | - |
| D2X89_RS23665 () | 28324..29589 | + | 1266 | WP_001447719.1 | conjugal transfer protein TraW | - |
| D2X89_RS23670 () | 29586..30257 | + | 672 | WP_000575345.1 | EAL domain-containing protein | - |
| D2X89_RS23675 () | 30254..31261 | + | 1008 | WP_000983282.1 | TraU family protein | - |
| D2X89_RS23680 () | 31365..34172 | + | 2808 | WP_001447718.1 | conjugal transfer mating pair stabilization protein TraN | - |
| D2X89_RS23685 () | 34211..35071 | - | 861 | WP_000709517.1 | hypothetical protein | - |
| D2X89_RS23690 () | 35194..35835 | - | 642 | WP_000796664.1 | hypothetical protein | - |
| D2X89_RS23695 () | 36130..36450 | + | 321 | WP_000547566.1 | hypothetical protein | - |
| D2X89_RS23700 () | 36754..36939 | + | 186 | WP_001186917.1 | hypothetical protein | - |
| D2X89_RS23705 () | 37159..38127 | + | 969 | WP_000085160.1 | CbbQ/NirQ/NorQ C-terminal domain-containing protein | - |
| D2X89_RS23710 () | 38138..39046 | + | 909 | WP_000739139.1 | hypothetical protein | - |
| D2X89_RS23715 () | 39107..39637 | + | 531 | WP_000987165.1 | single-stranded DNA-binding protein | - |
| D2X89_RS23720 () | 39732..40721 | + | 990 | WP_001282585.1 | phage recombination protein Bet | - |
| D2X89_RS23725 () | 40784..41794 | + | 1011 | WP_000706865.1 | YqaJ viral recombinase family protein | - |
| D2X89_RS23735 () | 41994..43271 | + | 1278 | WP_000170087.1 | DUF3150 domain-containing protein | - |
| D2X89_RS23740 () | 43356..45152 | + | 1797 | WP_000039319.1 | VWA domain-containing protein | - |
| D2X89_RS23745 () | 45214..45549 | + | 336 | WP_001447572.1 | hypothetical protein | - |
| D2X89_RS23750 () | 45814..46353 | + | 540 | WP_000018872.1 | hypothetical protein | - |
| D2X89_RS23755 () | 46444..46944 | + | 501 | WP_000793769.1 | hypothetical protein | - |
| D2X89_RS23760 () | 47018..47902 | + | 885 | WP_000477209.1 | hypothetical protein | - |
| D2X89_RS23765 () | 47968..48192 | + | 225 | WP_001102700.1 | 2Fe-2S ferredoxin-like protein | - |
| D2X89_RS23770 () | 48254..48643 | + | 390 | WP_000026577.1 | hypothetical protein | - |
| D2X89_RS23775 () | 48633..49085 | + | 453 | WP_001176699.1 | hypothetical protein | - |
| D2X89_RS23785 () | 49423..49614 | + | 192 | WP_000651508.1 | hypothetical protein | - |
| D2X89_RS23790 () | 49659..50036 | + | 378 | WP_001337696.1 | hypothetical protein | - |
| D2X89_RS23795 () | 50228..50572 | + | 345 | WP_000209093.1 | hypothetical protein | - |
| D2X89_RS23800 () | 50650..50952 | + | 303 | WP_000410925.1 | hypothetical protein | - |
| D2X89_RS23805 () | 51030..52655 | + | 1626 | WP_000201432.1 | DNA cytosine methyltransferase | - |
| D2X89_RS23810 () | 52716..53147 | + | 432 | WP_000687894.1 | hypothetical protein | - |
| D2X89_RS23815 () | 53221..53775 | + | 555 | WP_001093867.1 | hypothetical protein | - |
| D2X89_RS23820 () | 54008..54394 | + | 387 | WP_000042274.1 | hypothetical protein | - |
| D2X89_RS23825 () | 54482..56935 | + | 2454 | WP_001187969.1 | phosphoadenosine phosphosulfate reductase | - |
| D2X89_RS23830 () | 57137..57340 | + | 204 | WP_000050847.1 | hypothetical protein | - |
| D2X89_RS23835 () | 57412..58017 | + | 606 | WP_000071870.1 | 5'-deoxynucleotidase | - |
| D2X89_RS23840 () | 58010..58279 | + | 270 | WP_000184110.1 | hypothetical protein | - |
| D2X89_RS23845 () | 58293..58511 | + | 219 | WP_000260293.1 | hypothetical protein | - |
| D2X89_RS23850 () | 58585..59142 | + | 558 | WP_000064432.1 | hypothetical protein | - |
| D2X89_RS23855 () | 59217..60068 | + | 852 | WP_000595210.1 | hypothetical protein | - |
| D2X89_RS23860 () | 60527..60913 | + | 387 | WP_001077336.1 | hypothetical protein | - |
| D2X89_RS23865 () | 61091..62818 | + | 1728 | WP_000122922.1 | toprim domain-containing protein | - |
| D2X89_RS23870 () | 62805..63083 | + | 279 | WP_000268337.1 | hypothetical protein | - |
| D2X89_RS23875 () | 63156..63377 | + | 222 | WP_000714163.1 | hypothetical protein | - |
| D2X89_RS23880 () | 63559..64563 | - | 1005 | WP_000427619.1 | IS110-like element IS5075 family transposase | - |
| D2X89_RS23885 () | 64642..66546 | - | 1905 | Protein_63 | Tn3 family transposase | - |
| D2X89_RS23890 () | 66602..67306 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| D2X89_RS23895 () | 67369..68073 | - | 705 | WP_001067858.1 | IS6-like element IS26 family transposase | - |
| D2X89_RS23900 () | 68283..69272 | - | 990 | WP_001276635.1 | DUF3330 domain-containing protein | - |
| D2X89_RS23905 () | 69269..69505 | - | 237 | WP_001087810.1 | broad-spectrum mercury transporter MerE | - |
| D2X89_RS23910 () | 69502..69867 | - | 366 | WP_000995361.1 | mercury resistance co-regulator MerD | - |
| D2X89_RS23915 () | 69979..70617 | - | 639 | WP_000761850.1 | organomercurial lyase MerB | - |
| D2X89_RS23920 () | 70632..72317 | - | 1686 | WP_000149288.1 | mercury(II) reductase | - |
| D2X89_RS23925 () | 72389..72664 | - | 276 | WP_000732290.1 | mercury resistance system periplasmic binding protein MerP | - |
| D2X89_RS23930 () | 72680..73030 | - | 351 | WP_001294666.1 | mercuric transport protein MerT | - |
| D2X89_RS23935 () | 73102..73536 | + | 435 | WP_000414383.1 | mercury resistance transcriptional regulator MerR | - |
| D2X89_RS23940 () | 73636..74640 | + | 1005 | WP_000427623.1 | IS110-like element IS4321 family transposase | - |
| D2X89_RS23945 () | 74917..75036 | + | 120 | Protein_75 | permease | - |
| D2X89_RS24605 () | 75046..75162 | + | 117 | WP_000338626.1 | hypothetical protein | - |
| D2X89_RS23950 () | 75283..75657 | + | 375 | WP_000868820.1 | hypothetical protein | - |
| D2X89_RS23955 () | 75771..76496 | + | 726 | WP_000988731.1 | hypothetical protein | - |
| D2X89_RS23965 () | 76629..80882 | + | 4254 | WP_001257735.1 | RHS domain-containing protein | - |
| D2X89_RS23970 () | 80854..81294 | + | 441 | WP_001326394.1 | hypothetical protein | - |
| D2X89_RS23975 () | 81465..81917 | + | 453 | Protein_81 | hypothetical protein | - |
| D2X89_RS23980 () | 81933..82535 | - | 603 | WP_000278322.1 | hypothetical protein | - |
| D2X89_RS23985 () | 82805..83086 | + | 282 | WP_000575657.1 | hypothetical protein | - |
| D2X89_RS23995 () | 83385..83921 | + | 537 | WP_000949433.1 | hypothetical protein | - |
| D2X89_RS24000 () | 83924..84934 | + | 1011 | WP_000543934.1 | tyrosine-type recombinase/integrase | - |
| D2X89_RS24005 () | 84939..85808 | + | 870 | WP_000997323.1 | 3'-5' exonuclease | - |
| D2X89_RS24010 () | 85805..86296 | + | 492 | WP_000139717.1 | hypothetical protein | - |
| D2X89_RS24015 () | 86623..87498 | + | 876 | WP_001097010.1 | DNA replication terminus site-binding protein | - |
| D2X89_RS24020 () | 87660..88700 | + | 1041 | WP_000101568.1 | DNA-binding protein | - |
| D2X89_RS24030 () | 88987..90498 | + | 1512 | WP_000811656.1 | UvrD-helicase domain-containing protein | - |
| D2X89_RS24035 () | 90609..91649 | + | 1041 | WP_001326396.1 | conjugal transfer protein TraF | - |
| D2X89_RS24040 () | 91651..93084 | + | 1434 | WP_000256129.1 | conjugal transfer protein TraH | - |
| D2X89_RS24045 () | 93097..96711 | + | 3615 | WP_000534551.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| D2X89_RS24050 () | 96749..97111 | - | 363 | WP_000683483.1 | hypothetical protein | - |
| D2X89_RS24055 () | 97827..98099 | + | 273 | WP_000356489.1 | helix-turn-helix domain-containing protein | - |
| D2X89_RS24060 () | 98099..98632 | + | 534 | WP_000790610.1 | transglycosylase SLT domain-containing protein | - |
| D2X89_RS24065 () | 98643..99251 | + | 609 | WP_000891157.1 | hypothetical protein | - |
| D2X89_RS24070 () | 99248..99798 | + | 551 | Protein_98 | regulator | - |
| D2X89_RS24075 () | 99858..100277 | - | 420 | WP_000651490.1 | H-NS histone family protein | - |
| D2X89_RS24080 () | 100279..100572 | - | 294 | WP_000919078.1 | hypothetical protein | - |
| D2X89_RS24085 () | 100589..101572 | - | 984 | WP_000077458.1 | ParM/StbA family protein | - |
| D2X89_RS24090 () | 102071..102610 | + | 540 | WP_001447712.1 | hypothetical protein | - |
| D2X89_RS24095 () | 102615..102902 | + | 288 | WP_000127321.1 | hypothetical protein | - |
| D2X89_RS24100 () | 102887..103987 | + | 1101 | WP_000350011.1 | plasmid replication protein | - |
| D2X89_RS24115 () | 105024..105458 | - | 435 | WP_000883925.1 | hypothetical protein | - |
| D2X89_RS24120 () | 105476..106591 | - | 1116 | WP_000946102.1 | phosphoadenosine phosphosulfate reductase family protein | - |
| D2X89_RS24125 () | 106860..107468 | + | 609 | WP_000849071.1 | hypothetical protein | - |
| D2X89_RS24130 () | 107473..107994 | + | 522 | WP_000393785.1 | hypothetical protein | - |
| D2X89_RS24135 () | 107997..108518 | + | 522 | WP_000805800.1 | hypothetical protein | - |
| D2X89_RS24140 () | 108615..109088 | + | 474 | WP_000057877.1 | hypothetical protein | - |
| D2X89_RS24145 () | 109099..109392 | + | 294 | WP_001370730.1 | hypothetical protein | - |
| D2X89_RS24150 () | 109397..110251 | + | 855 | WP_000539392.1 | hypothetical protein | - |
| D2X89_RS24155 () | 110251..111210 | + | 960 | WP_000829616.1 | S49 family peptidase | - |
| D2X89_RS24160 () | 111226..112086 | + | 861 | WP_000139698.1 | DsbA family protein | - |
| D2X89_RS24165 () | 112120..112548 | + | 429 | WP_000591074.1 | hypothetical protein | - |
| D2X89_RS24170 () | 112605..112964 | + | 360 | WP_000422768.1 | hypothetical protein | - |
| D2X89_RS24175 () | 112964..113410 | + | 447 | WP_000919345.1 | Fe3+-siderophore ABC transporter permease | - |
| D2X89_RS24180 () | 113407..113925 | + | 519 | WP_000210756.1 | nitrite reductase | - |
| D2X89_RS24185 () | 113925..114155 | + | 231 | WP_000972663.1 | hypothetical protein | - |
| D2X89_RS24190 () | 114142..114999 | + | 858 | WP_001167032.1 | hypothetical protein | - |
| D2X89_RS24200 () | 115230..115757 | + | 528 | WP_001236377.1 | thermonuclease family protein | - |
| D2X89_RS24205 () | 115815..116087 | + | 273 | WP_001043047.1 | HU family DNA-binding protein | - |
| D2X89_RS24210 () | 116175..116468 | + | 294 | WP_001239997.1 | chromosome segregation protein ParM | - |
| D2X89_RS24215 () | 116495..116797 | - | 303 | WP_000124640.1 | XRE family transcriptional regulator | Antitoxin Detail |
| D2X89_RS24220 () | 116802..117152 | - | 351 | WP_000270043.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| D2X89_RS24225 () | 117315..117863 | + | 549 | WP_001061574.1 | transcriptional regulator | - |
| D2X89_RS24235 () | 118204..118398 | + | 195 | WP_000343597.1 | hypothetical protein | - |
| D2X89_RS24240 () | 118409..118780 | + | 372 | WP_000516916.1 | hypothetical protein | - |
| D2X89_RS24245 () | 118773..119243 | + | 471 | WP_001281821.1 | hypothetical protein | - |
| D2X89_RS24250 () | 119258..119593 | - | 336 | WP_000683476.1 | hypothetical protein | - |
| D2X89_RS24255 () | 119690..120178 | + | 489 | WP_001273096.1 | DUF1643 domain-containing protein | - |
| D2X89_RS24260 () | 120181..120678 | + | 498 | WP_000062185.1 | hypothetical protein | - |
| D2X89_RS24270 () | 120893..121597 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| D2X89_RS24275 () | 121662..121841 | - | 180 | Protein_134 | helix-turn-helix transcriptional regulator | - |
| D2X89_RS24280 () | 122148..122852 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| D2X89_RS24610 () | 122858..122998 | + | 141 | WP_001044210.1 | hypothetical protein | - |
| D2X89_RS24290 () | 123484..124221 | + | 738 | WP_001366550.1 | recombinase family protein | - |
| D2X89_RS24295 () | 124218..124442 | + | 225 | WP_000743213.1 | hypothetical protein | - |
| D2X89_RS24300 () | 124653..126146 | + | 1494 | WP_001120888.1 | IS91-like element ISVsa3 family transposase | - |
| D2X89_RS24305 () | 126177..127061 | + | 885 | WP_001447541.1 | DUF3363 domain-containing protein | - |
| D2X89_RS24310 () | 127278..128492 | + | 1215 | WP_000214123.1 | chloramphenicol/florfenicol efflux MFS transporter FloR | - |
| D2X89_RS24315 () | 128520..128825 | + | 306 | WP_001255015.1 | LysR family transcriptional regulator | - |
| D2X89_RS24320 () | 128937..129125 | + | 189 | Protein_143 | IS91 family transposase | - |
| D2X89_RS24325 () | 129092..130291 | - | 1200 | WP_000804063.1 | tetracycline efflux MFS transporter Tet(A) | - |
| D2X89_RS24330 () | 130397..131047 | + | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| D2X89_RS24335 () | 131079..131321 | - | 243 | WP_000844627.1 | transposase | - |
| D2X89_RS24345 () | 131627..132463 | - | 837 | WP_000480968.1 | aminoglycoside O-phosphotransferase APH(6)-Id | - |
| D2X89_RS24350 () | 132463..133266 | - | 804 | WP_001082319.1 | aminoglycoside O-phosphotransferase APH(3'')-Ib | - |
| D2X89_RS24355 () | 133327..134142 | - | 816 | WP_001043260.1 | sulfonamide-resistant dihydropteroate synthase Sul2 | - |
| D2X89_RS24365 () | 134449..134760 | + | 312 | WP_000338945.1 | hypothetical protein | - |
| D2X89_RS24370 () | 134934..135719 | + | 786 | WP_001151304.1 | ParA family protein | - |
| D2X89_RS24375 () | 135723..136904 | + | 1182 | WP_001207227.1 | ParB/RepB/Spo0J family partition protein | - |
| D2X89_RS24380 () | 136953..137225 | + | 273 | WP_000703827.1 | helix-turn-helix domain-containing protein | - |
| D2X89_RS24385 () | 137278..137913 | - | 636 | WP_000074431.1 | N-6 DNA methylase | - |
| D2X89_RS24615 () | 138005..138148 | - | 144 | WP_000939033.1 | hypothetical protein | - |
| D2X89_RS24390 () | 138475..138852 | + | 378 | WP_001125904.1 | hypothetical protein | - |
| D2X89_RS24395 () | 138845..139126 | + | 282 | WP_000044823.1 | hypothetical protein | - |
| D2X89_RS24400 () | 139101..139775 | + | 675 | WP_000344149.1 | hypothetical protein | - |
| D2X89_RS24405 () | 139843..140274 | + | 432 | WP_001326170.1 | hypothetical protein | - |
| D2X89_RS24410 () | 140280..140591 | + | 312 | WP_001447539.1 | hypothetical protein | - |
| D2X89_RS24415 () | 140600..141100 | + | 501 | WP_000647188.1 | hypothetical protein | - |
| D2X89_RS24420 () | 141104..142531 | + | 1428 | WP_000936897.1 | DNA cytosine methyltransferase | - |
| D2X89_RS24425 () | 142531..143187 | + | 657 | WP_000268552.1 | hypothetical protein | - |
| D2X89_RS24430 () | 143243..143860 | + | 618 | WP_000464630.1 | hypothetical protein | - |
| D2X89_RS24440 () | 144072..144371 | + | 300 | WP_001326171.1 | hypothetical protein | - |
| D2X89_RS24445 () | 144462..144950 | - | 489 | WP_000467110.1 | hypothetical protein | - |
| D2X89_RS24450 () | 144965..147157 | - | 2193 | WP_000366823.1 | DNA topoisomerase 3 | - |
| D2X89_RS24455 () | 147157..147390 | - | 234 | WP_001191890.1 | hypothetical protein | - |
| D2X89_RS24460 () | 147372..147989 | - | 618 | WP_001249395.1 | hypothetical protein | - |
| D2X89_RS24465 () | 148157..151129 | + | 2973 | WP_001326173.1 | TraI domain-containing protein | - |
| D2X89_RS24470 () | 151126..152991 | + | 1866 | WP_000178857.1 | conjugative transfer system coupling protein TraD | - |
| D2X89_RS24475 () | 153002..153586 | + | 585 | WP_000332868.1 | hypothetical protein | - |
| D2X89_RS24480 () | 153543..154172 | + | 630 | WP_000743449.1 | DUF4400 domain-containing protein | - |
| D2X89_RS24485 () | 154182..154628 | + | 447 | WP_000122507.1 | hypothetical protein | - |
| D2X89_RS24490 () | 154638..155015 | + | 378 | WP_000869297.1 | hypothetical protein | - |
| D2X89_RS24495 () | 155015..155677 | + | 663 | WP_001231464.1 | hypothetical protein | - |
| D2X89_RS24500 () | 156001..156378 | + | 378 | WP_001326174.1 | hypothetical protein | - |
| D2X89_RS24505 () | 156523..156804 | + | 282 | WP_000805625.1 | type IV conjugative transfer system protein TraL | - |
| D2X89_RS24510 () | 156801..157427 | + | 627 | WP_001049717.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|