MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 87516 bp
Accession: NZ_CP041112 Location: 1..87516 Organism: Escherichia coli strain ECCTRSRTH03 Replicon: plasmid unnamed2
Accession: NZ_CP041112 Location: 1..87516 Organism: Escherichia coli strain ECCTRSRTH03 Replicon: plasmid unnamed2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CI675_RS23220 () | 1..861 | + | 861 | WP_021546926.1 | replication protein RepA | - |
| CI675_RS23225 () | 1261..2466 | + | 1206 | WP_000817632.1 | AAA family ATPase | - |
| CI675_RS23230 () | 2463..3428 | + | 966 | WP_000725192.1 | ParB/RepB/Spo0J family partition protein | - |
| CI675_RS23235 () | 3693..4253 | + | 561 | Protein_3 | hypothetical protein | - |
| CI675_RS23240 () | 4426..5625 | - | 1200 | WP_094316173.1 | IS91 family transposase | - |
| CI675_RS23245 () | 5635..5823 | - | 189 | WP_048230572.1 | hypothetical protein | - |
| CI675_RS24945 () | 5940..6050 | - | 111 | Protein_6 | peptidase | - |
| CI675_RS23255 () | 6502..7467 | + | 966 | WP_023281075.1 | DUF1738 domain-containing protein | - |
| CI675_RS24950 () | 7639..7815 | + | 177 | WP_013438824.1 | hypothetical protein | - |
| CI675_RS23260 () | 7947..8378 | + | 432 | WP_001776120.1 | hypothetical protein | - |
| CI675_RS23265 () | 8410..8937 | - | 528 | WP_061354919.1 | phospholipase D family protein | - |
| CI675_RS23270 () | 8930..9676 | - | 747 | WP_000909125.1 | hypothetical protein | - |
| CI675_RS23275 () | 9691..11598 | - | 1908 | WP_023281074.1 | TraM recognition domain-containing protein | - |
| CI675_RS23285 () | 12302..12694 | - | 393 | WP_001079960.1 | H-NS histone family protein | - |
| CI675_RS23290 () | 12691..14892 | - | 2202 | WP_023281073.1 | type IA DNA topoisomerase | - |
| CI675_RS23295 () | 14889..15197 | - | 309 | WP_000212005.1 | hypothetical protein | - |
| CI675_RS23300 () | 15173..15508 | - | 336 | WP_001776113.1 | hypothetical protein | - |
| CI675_RS23305 () | 15535..15852 | - | 318 | WP_023281072.1 | hypothetical protein | - |
| CI675_RS23310 () | 15943..16344 | - | 402 | WP_001776111.1 | hypothetical protein | - |
| CI675_RS23315 () | 16331..17380 | - | 1050 | WP_000342114.1 | P-type DNA transfer ATPase VirB11 | - |
| CI675_RS23320 () | 17384..18580 | - | 1197 | WP_023281071.1 | TrbI/VirB10 family protein | - |
| CI675_RS23325 () | 18577..19470 | - | 894 | WP_001045307.1 | P-type conjugative transfer protein VirB9 | - |
| CI675_RS23330 () | 19463..20149 | - | 687 | WP_023281070.1 | type IV secretion system protein | - |
| CI675_RS24955 () | 20142..20282 | - | 141 | WP_000873539.1 | hypothetical protein | - |
| CI675_RS23335 () | 20359..21366 | - | 1008 | WP_000014166.1 | type IV secretion system protein | - |
| CI675_RS23340 () | 21384..21668 | - | 285 | WP_000769859.1 | EexN family lipoprotein | - |
| CI675_RS23345 () | 21680..22396 | - | 717 | WP_000770034.1 | type IV secretion system protein | - |
| CI675_RS23350 () | 22415..25165 | - | 2751 | WP_017694776.1 | VirB3 family type IV secretion system protein | - |
| CI675_RS23355 () | 25175..25474 | - | 300 | WP_000175462.1 | TrbC/VirB2 family protein | - |
| CI675_RS23360 () | 25485..26147 | - | 663 | WP_000958205.1 | lytic transglycosylase domain-containing protein | - |
| CI675_RS23365 () | 26150..26365 | - | 216 | WP_001112907.1 | hypothetical protein | - |
| CI675_RS23370 () | 26358..26666 | - | 309 | WP_000062770.1 | hypothetical protein | - |
| CI675_RS23375 () | 26980..27894 | + | 915 | WP_000891983.1 | response regulator | - |
| CI675_RS23380 () | 27898..28881 | + | 984 | WP_064769770.1 | hypothetical protein | - |
| CI675_RS23385 () | 28874..29362 | + | 489 | WP_000238872.1 | molybdopterin-dependent oxidoreductase | - |
| CI675_RS23390 () | 29359..31077 | + | 1719 | WP_000739198.1 | hybrid sensor histidine kinase/response regulator | - |
| CI675_RS23395 () | 31590..31829 | + | 240 | Protein_36 | RepA protein | - |
| CI675_RS23400 () | 31875..32572 | + | 698 | Protein_37 | IS1 family transposase | - |
| CI675_RS23405 () | 32913..33902 | + | 990 | WP_001515196.1 | tyrosine-type recombinase/integrase | - |
| CI675_RS23425 () | 36096..36365 | + | 270 | WP_021546940.1 | hypothetical protein | Antitoxin Detail |
| CI675_RS23430 () | 36362..36643 | + | 282 | WP_000969996.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CI675_RS23435 () | 36689..36901 | + | 213 | Protein_42 | 3'-5' exonuclease | - |
| CI675_RS23440 () | 36975..37184 | + | 210 | Protein_43 | transposase | - |
| CI675_RS23445 () | 37485..39236 | - | 1752 | Protein_44 | Tn3-like element TnAs1 family transposase | - |
| CI675_RS23450 () | 39225..39632 | + | 408 | WP_001214976.1 | cysteine hydrolase | - |
| CI675_RS23455 () | 39770..40654 | + | 885 | WP_000058717.1 | EamA family transporter | - |
| CI675_RS23460 () | 40686..41885 | - | 1200 | WP_001493765.1 | tetracycline efflux MFS transporter Tet(A) | - |
| CI675_RS23465 () | 41991..42641 | + | 651 | WP_001493764.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| CI675_RS23470 () | 42673..42915 | - | 243 | WP_000844627.1 | transposase | - |
| CI675_RS23475 () | 42973..44811 | - | 1839 | Protein_50 | Tn3-like element TnAs1 family transposase | - |
| CI675_RS23480 () | 44856..45560 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| CI675_RS24960 () | 45566..45706 | + | 141 | WP_001044210.1 | hypothetical protein | - |
| CI675_RS23490 () | 46192..46929 | + | 738 | WP_001446887.1 | recombinase family protein | - |
| CI675_RS23495 () | 46926..47150 | + | 225 | WP_000743213.1 | hypothetical protein | - |
| CI675_RS23500 () | 47361..48852 | + | 1492 | Protein_55 | IS91-like element ISVsa3 family transposase | - |
| CI675_RS23510 () | 49317..50159 | + | 843 | WP_001456218.1 | alpha/beta fold putative hydrolase EstX | - |
| CI675_RS23515 () | 50248..51039 | + | 792 | WP_001206316.1 | ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA1 | - |
| CI675_RS23520 () | 51142..51513 | + | 372 | WP_032324164.1 | TIR domain-containing protein | - |
| CI675_RS23525 () | 51527..51910 | + | 384 | Protein_59 | caspase family protein | - |
| CI675_RS23530 () | 52335..52931 | + | 597 | Protein_60 | IS91 family transposase | - |
| CI675_RS23535 () | 53078..53935 | - | 858 | Protein_61 | TEM family class A beta-lactamase | - |
| CI675_RS23540 () | 54170..54851 | + | 682 | Protein_62 | IS6 family transposase | - |
| CI675_RS23545 () | 54924..55725 | + | 802 | Protein_63 | IS66 family transposase | - |
| CI675_RS23555 () | 56558..56905 | - | 348 | Protein_64 | cupin domain-containing protein | - |
| CI675_RS23560 () | 57042..57560 | - | 519 | WP_185963321.1 | transposase | - |
| CI675_RS23575 () | 58733..58978 | - | 246 | WP_185963322.1 | hypothetical protein | - |
| CI675_RS23580 () | 59003..59705 | + | 703 | Protein_67 | IS6 family transposase | - |
| CI675_RS23585 () | 59759..60277 | + | 519 | Protein_68 | IS5-like element IS5 family transposase | - |
| CI675_RS23590 () | 60624..60818 | - | 195 | WP_053273080.1 | hypothetical protein | - |
| CI675_RS23595 () | 61120..61819 | - | 700 | Protein_70 | IS1-like element IS1A family transposase | - |
| CI675_RS23600 () | 61877..62092 | + | 216 | Protein_71 | molecular chaperone | - |
| CI675_RS23605 () | 62094..63158 | + | 1065 | WP_001269817.1 | fimbrial protein | - |
| CI675_RS23610 () | 63201..63401 | - | 201 | WP_046788569.1 | cell surface composition regulator GlgS | - |
| CI675_RS23615 () | 63666..64260 | + | 595 | Protein_74 | YqiJ family protein | - |
| CI675_RS23620 () | 64294..64991 | + | 698 | Protein_75 | IS1 family transposase | - |
| CI675_RS23625 () | 65008..65562 | + | 555 | Protein_76 | IS6-like element IS26 family transposase | - |
| CI675_RS23630 () | 65616..66083 | + | 468 | Protein_77 | conjugal transfer protein | - |
| CI675_RS23635 () | 66328..66444 | + | 117 | WP_001814923.1 | tetracycline resistance determinant leader peptide | - |
| CI675_RS23640 () | 66460..68379 | + | 1920 | WP_025989258.1 | tetracycline resistance ribosomal protection protein Tet(M) | - |
| CI675_RS23645 () | 68498..68665 | + | 168 | WP_000336323.1 | cysteine-rich KTR domain-containing protein | - |
| CI675_RS23650 () | 68932..69636 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| CI675_RS23655 () | 69826..70641 | - | 816 | WP_000018329.1 | aminoglycoside O-phosphotransferase APH(3')-Ia | - |
| CI675_RS23660 () | 70792..71496 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| CI675_RS23665 () | 71569..71808 | + | 240 | WP_011264039.1 | macrolide transporter | - |
| CI675_RS23670 () | 71954..72817 | + | 864 | WP_054377175.1 | SDR family oxidoreductase | - |
| CI675_RS23675 () | 72855..73100 | + | 246 | WP_001354008.1 | GrpB family protein | - |
| CI675_RS23680 () | 73569..74360 | + | 792 | WP_000034420.1 | sulfonamide-resistant dihydropteroate synthase Sul3 | - |
| CI675_RS24970 () | 74363..74638 | - | 276 | WP_109023896.1 | hypothetical protein | - |
| CI675_RS23685 () | 74640..75275 | + | 636 | Protein_89 | transposase | - |
| CI675_RS23695 () | 75540..75872 | - | 333 | WP_000800531.1 | quaternary ammonium compound efflux SMR transporter QacL | - |
| CI675_RS23700 () | 76042..76833 | - | 792 | WP_001206316.1 | ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA1 | - |
| CI675_RS23705 () | 76926..78185 | - | 1260 | WP_000095725.1 | chloramphenicol efflux MFS transporter CmlA1 | - |
| CI675_RS23710 () | 78447..79238 | - | 792 | WP_001206356.1 | ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA2 | - |
| CI675_RS23715 () | 79244..79534 | - | 291 | WP_001336345.1 | DUF1010 domain-containing protein | - |
| CI675_RS23720 () | 79646..80143 | - | 498 | WP_001083725.1 | trimethoprim-resistant dihydrofolate reductase DfrA12 | - |
| CI675_RS24975 () | 80288..80512 | + | 225 | Protein_96 | phage integrase N-terminal SAM-like domain-containing protein | - |
| CI675_RS23730 () | 80566..81270 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| CI675_RS23735 () | 81333..81839 | + | 507 | Protein_98 | IS3-like element IS1133 family transposase | - |
| CI675_RS23740 () | 81946..82749 | + | 804 | WP_001082319.1 | aminoglycoside O-phosphotransferase APH(3'')-Ib | - |
| CI675_RS23745 () | 82749..83585 | + | 837 | WP_000480968.1 | aminoglycoside O-phosphotransferase APH(6)-Id | - |
| CI675_RS23750 () | 83826..83912 | + | 87 | WP_111963096.1 | transposase | - |
| CI675_RS23755 () | 83958..84551 | - | 594 | Protein_102 | IS5-like element IS903B family transposase | - |
| CI675_RS23760 () | 84671..84859 | + | 189 | WP_048230572.1 | hypothetical protein | - |
| CI675_RS23765 () | 84869..86068 | + | 1200 | WP_094316173.1 | IS91 family transposase | - |
| CI675_RS23770 () | 86237..86605 | - | 369 | Protein_105 | transposase | - |
| CI675_RS23775 () | 86604..86795 | + | 192 | WP_063090592.1 | hypothetical protein | - |
| CI675_RS23780 () | 86807..87199 | + | 393 | WP_001281116.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|