MGE detailed information
MGE type: Prophage MGE length: 79188 bp
Accession: NZ_CP041110 Location: 1931239..2010426 Organism: Escherichia coli strain ECCTRSRTH03 Replicon: chromosome
Accession: NZ_CP041110 Location: 1931239..2010426 Organism: Escherichia coli strain ECCTRSRTH03 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CI675_RS09295 () | 1927126..1928034 | + | 909 | Protein_1799 | trimethylamine N-oxide reductase TorZ | - |
| CI675_RS09300 () | 1928263..1929234 | - | 972 | WP_086642389.1 | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | - |
| CI675_RS09305 () | 1929231..1929974 | - | 744 | WP_000019590.1 | carboxy-S-adenosyl-L-methionine synthase CmoA | - |
| CI675_RS09310 () | 1930015..1930410 | - | 396 | WP_000252980.1 | MAPEG family protein | - |
| CI675_RS09315 () | 1930463..1931242 | - | 780 | WP_061355329.1 | DUF72 domain-containing protein | - |
| CI675_RS09320 () | 1931239..1932498 | - | 1260 | WP_046659706.1 | Putative defective protein IntQ ; Integrase | Integrase |
| CI675_RS09325 () | 1932541..1932786 | - | 246 | WP_023283988.1 | excisionase family protein | - |
| CI675_RS09330 () | 1932790..1933005 | - | 216 | WP_063079899.1 | TraR/DksA family transcriptional regulator | - |
| CI675_RS09335 () | 1933007..1933225 | - | 219 | WP_023304908.1 | hypothetical protein | - |
| CI675_RS09340 () | 1933222..1934391 | - | 1170 | WP_069914300.1 | DNA cytosine methyltransferase | - |
| CI675_RS09345 () | 1934388..1935044 | - | 657 | WP_086642390.1 | DNA methyltransferase | - |
| CI675_RS09350 () | 1935041..1935199 | - | 159 | WP_023283323.1 | DUF1317 family protein | - |
| CI675_RS09355 () | 1935196..1935876 | - | 681 | WP_061357276.1 | YqaJ viral recombinase family protein | - |
| CI675_RS09360 () | 1935873..1936718 | - | 846 | WP_061357275.1 | phage recombination protein Bet | - |
| CI675_RS09365 () | 1936734..1937018 | - | 285 | WP_016529276.1 | host nuclease inhibitor GamL | - |
| CI675_RS09370 () | 1937026..1937826 | - | 801 | Protein_1814 | hypothetical protein | - |
| CI675_RS09375 () | 1937892..1938589 | + | 698 | Protein_1815 | IS1 family transposase IS1R | Transposase |
| CI675_RS09380 () | 1938746..1939060 | + | 315 | WP_069914296.1 | hypothetical protein | - |
| CI675_RS09385 () | 1939075..1939554 | + | 480 | WP_086642365.1 | lysozyme | - |
| CI675_RS24850 () | 1939563..1939952 | + | 390 | WP_069914294.1 | DUF2570 domain-containing protein | - |
| CI675_RS09395 () | 1940122..1940682 | - | 561 | WP_063079906.1 | ATP-dependent Clp protease proteolytic subunit | VF |
| CI675_RS09400 () | 1940832..1941470 | + | 639 | WP_069914303.1 | hypothetical protein | - |
| CI675_RS09405 () | 1941722..1942303 | + | 582 | WP_064141836.1 | hypothetical protein | - |
| CI675_RS09410 () | 1942245..1944371 | + | 2127 | WP_086642364.1 | phage terminase large subunit family protein | - |
| CI675_RS09415 () | 1944380..1944643 | + | 264 | WP_053287027.1 | phage head-tail adapter protein | - |
| CI675_RS09420 () | 1944643..1946277 | + | 1635 | WP_064141834.1 | phage portal protein | - |
| CI675_RS09425 () | 1946274..1947140 | + | 867 | WP_021543305.1 | S49 family peptidase | - |
| CI675_RS09430 () | 1947142..1947732 | + | 591 | WP_086642363.1 | hypothetical protein | - |
| CI675_RS09435 () | 1947732..1948139 | + | 408 | WP_086642362.1 | head decoration protein | - |
| CI675_RS09440 () | 1948238..1949287 | + | 1050 | WP_021543308.1 | major capsid protein | - |
| CI675_RS09445 () | 1949289..1949666 | + | 378 | WP_029394705.1 | hypothetical protein | - |
| CI675_RS09450 () | 1949671..1950030 | + | 360 | WP_021543310.1 | hypothetical protein | - |
| CI675_RS09455 () | 1950027..1950572 | + | 546 | WP_086642361.1 | ATP-binding protein | - |
| CI675_RS09460 () | 1950575..1950760 | + | 186 | WP_021543312.1 | DUF2635 domain-containing protein | - |
| CI675_RS09465 () | 1950757..1952268 | + | 1512 | WP_086642360.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| CI675_RS09470 () | 1952272..1952643 | + | 372 | WP_000896639.1 | phage tail tube protein | - |
| CI675_RS09475 () | 1952645..1952923 | + | 279 | WP_000818812.1 | phage tail assembly protein | - |
| CI675_RS09485 () | 1953065..1954918 | + | 1854 | WP_094313106.1 | hypothetical protein | - |
| CI675_RS09490 () | 1954965..1956365 | + | 1401 | WP_032349561.1 | DNA circularization protein | - |
| CI675_RS09495 () | 1956362..1957447 | + | 1086 | WP_000102291.1 | tail protein | - |
| CI675_RS09500 () | 1957444..1958025 | + | 582 | WP_086642358.1 | phage baseplate assembly protein | - |
| CI675_RS09505 () | 1958022..1958471 | + | 450 | WP_086642357.1 | phage GP46 family protein | - |
| CI675_RS09510 () | 1958461..1959609 | + | 1149 | WP_029394698.1 | baseplate J/gp47 family protein | - |
| CI675_RS09515 () | 1959606..1960280 | + | 675 | WP_021543317.1 | YmfQ family protein | - |
| CI675_RS09520 () | 1960307..1961092 | + | 786 | WP_086642356.1 | phage tail protein | - |
| CI675_RS09525 () | 1961071..1962162 | - | 1092 | WP_086642355.1 | acyltransferase | - |
| CI675_RS09530 () | 1962162..1962425 | - | 264 | WP_064141824.1 | hypothetical protein | - |
| CI675_RS09535 () | 1962527..1964302 | + | 1776 | WP_086642354.1 | GDSL family lipase | - |
| CI675_RS09540 () | 1964305..1965054 | + | 750 | WP_086642353.1 | hypothetical protein | - |
| CI675_RS09545 () | 1965434..1965673 | + | 240 | WP_000555016.1 | hypothetical protein | - |
| CI675_RS09550 () | 1965673..1965990 | + | 318 | WP_000506740.1 | hypothetical protein | - |
| CI675_RS09555 () | 1966254..1966820 | - | 567 | WP_000891621.1 | hydrolase | - |
| CI675_RS09560 () | 1967130..1968902 | + | 1773 | WP_001258678.1 | aspartate--tRNA ligase | - |
| CI675_RS09565 () | 1969020..1969472 | + | 453 | WP_001300367.1 | dihydroneopterin triphosphate diphosphatase | - |
| CI675_RS09570 () | 1969501..1970241 | + | 741 | WP_000907248.1 | putative transcriptional regulatory protein YebC | VF |
| CI675_RS09575 () | 1970276..1970797 | + | 522 | WP_001295503.1 | crossover junction endodeoxyribonuclease RuvC | - |
| CI675_RS09580 () | 1970799..1971401 | - | 603 | WP_001024932.1 | YebB family permuted papain-like enzyme | - |
| CI675_RS09585 () | 1971472..1971537 | + | 66 | WP_010723105.1 | stress response small protein YobI | - |
| CI675_RS09590 () | 1971676..1972287 | + | 612 | WP_000580323.1 | Holliday junction branch migration protein RuvA | - |
| CI675_RS09595 () | 1972296..1973306 | + | 1011 | WP_000568519.1 | Holliday junction branch migration DNA helicase RuvB | - |
| CI675_RS09600 () | 1973453..1974238 | - | 786 | WP_000571480.1 | High-affinity zinc uptake system membrane protein ZnuB | VF |
| CI675_RS09605 () | 1974235..1974990 | - | 756 | WP_000202996.1 | Zinc import ATP-binding protein ZnuC | VF |
| CI675_RS09610 () | 1975069..1976001 | + | 933 | WP_001300644.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| CI675_RS09615 () | 1976017..1977339 | + | 1323 | WP_001184045.1 | murein DD-endopeptidase MepM | - |
| CI675_RS09620 () | 1977459..1978430 | + | 972 | WP_000448381.1 | Lipid A biosynthesis myristoyltransferase | VF |
| CI675_RS09625 () | 1978561..1980003 | - | 1443 | WP_000091148.1 | pyruvate kinase | - |
| CI675_RS09630 () | 1980131..1981000 | - | 870 | WP_001056706.1 | DNA-binding transcriptional regulator HexR | - |
| CI675_RS09635 () | 1981338..1982813 | + | 1476 | WP_000301727.1 | glucose-6-phosphate dehydrogenase | - |
| CI675_RS09640 () | 1983048..1984859 | + | 1812 | WP_001069467.1 | phosphogluconate dehydratase | - |
| CI675_RS09645 () | 1984896..1985537 | + | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| CI675_RS09650 () | 1985593..1986771 | - | 1179 | WP_000173484.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| CI675_RS09655 () | 1986905..1987195 | + | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| CI675_RS09660 () | 1987262..1987618 | + | 357 | WP_001295500.1 | protein YebF | - |
| CI675_RS09665 () | 1987945..1988604 | + | 660 | WP_000024757.1 | tellurite resistance TerB family protein | - |
| CI675_RS09670 () | 1988813..1990873 | + | 2061 | WP_000936927.1 | oligopeptidase B | - |
| CI675_RS09675 () | 1990870..1991532 | - | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| CI675_RS09680 () | 1991556..1992212 | - | 657 | WP_000011658.1 | carbon-nitrogen hydrolase family protein | - |
| CI675_RS09685 () | 1992314..1992544 | - | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| CI675_RS09690 () | 1992683..1993057 | + | 375 | WP_000168747.1 | CopC domain-containing protein YobA | - |
| CI675_RS09695 () | 1993061..1993933 | + | 873 | WP_000879289.1 | copper homeostasis membrane protein CopD | - |
| CI675_RS09700 () | 1993946..1994287 | + | 342 | WP_000976476.1 | YebY family protein | - |
| - () | 1994315..1994586 | - | 272 | - | - | Antitoxin Detail |
| - () | 1994445..1994548 | + | 104 | - | - | Toxin Detail |
| CI675_RS09705 () | 1994683..1995339 | + | 657 | WP_000812724.1 | protein-serine/threonine phosphatase | - |
| CI675_RS09710 () | 1995340..1995531 | - | 192 | WP_000457842.1 | YebW family protein | - |
| CI675_RS09715 () | 1995636..1995872 | - | 237 | WP_001295499.1 | DUF1480 family protein | - |
| CI675_RS09720 () | 1995990..1997429 | - | 1440 | WP_001352260.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| CI675_RS09725 () | 1997509..2000142 | - | 2634 | WP_001326728.1 | hypothetical protein | VF |
| CI675_RS09730 () | 2000111..2001394 | - | 1284 | WP_001207282.1 | membrane integrity lipid transport subunit YebS | - |
| CI675_RS09735 () | 2001524..2002021 | + | 498 | WP_001043877.1 | L-methionine (R)-S-oxide reductase | - |
| CI675_RS09740 () | 2002118..2002816 | + | 699 | WP_000431381.1 | RNA chaperone ProQ | - |
| CI675_RS09745 () | 2002836..2004884 | + | 2049 | WP_001055791.1 | carboxy terminal-processing peptidase | - |
| CI675_RS09750 () | 2005076..2005957 | + | 882 | WP_000984520.1 | protease HtpX | - |
| CI675_RS09755 () | 2006003..2007376 | - | 1374 | WP_001127216.1 | MFS transporter | - |
| CI675_RS09760 () | 2007553..2008344 | + | 792 | WP_001262203.1 | DNA-binding transcriptional regulator KdgR | - |
| CI675_RS09765 () | 2008488..2008727 | - | 240 | WP_001211011.1 | hypothetical protein | - |
| CI675_RS09770 () | 2008886..2009029 | + | 144 | WP_000714550.1 | PhoP/PhoQ regulator MgrB | - |
| CI675_RS09775 () | 2009104..2009391 | + | 288 | WP_001006866.1 | YebO family protein | - |
| CI675_RS09780 () | 2010061..2010204 | + | 144 | WP_001295496.1 | YobF family protein | - |
| CI675_RS09785 () | 2010217..2010426 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| CI675_RS09790 () | 2010592..2011401 | + | 810 | WP_000010115.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| CI675_RS09795 () | 2011398..2011964 | - | 567 | WP_001296134.1 | manganese efflux pump MntP | - |
| CI675_RS09800 () | 2012393..2012851 | - | 459 | WP_000156255.1 | DUF986 family protein | - |
| CI675_RS09805 () | 2012906..2013757 | - | 852 | WP_000228655.1 | PTS mannose transporter subunit IID | - |
| CI675_RS09810 () | 2013770..2014570 | - | 801 | WP_000406926.1 | PTS mannose transporter subunit IIC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|