MGE detailed information
MGE type: Prophage MGE length: 68989 bp
Accession: NZ_CP041051 Location: 2806489..2875477 Organism: Citrobacter sp. CF971 Replicon: chromosome
Accession: NZ_CP041051 Location: 2806489..2875477 Organism: Citrobacter sp. CF971 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E6P06_RS16965 () | 2801502..2802425 | - | 924 | WP_003844090.1 | hypothetical protein | - |
| E6P06_RS16970 () | 2802413..2802862 | - | 450 | WP_139935479.1 | hypothetical protein | - |
| E6P06_RS16975 () | 2802852..2804153 | - | 1302 | WP_032939141.1 | type III secretion system ATPase SctN | - |
| E6P06_RS16980 () | 2804153..2804557 | - | 405 | WP_003844095.1 | type III secretion system chaperone SpaK | - |
| E6P06_RS16985 () | 2804562..2806001 | - | 1440 | WP_168199049.1 | FHIPEP family type III secretion protein | - |
| E6P06_RS16990 () | 2806118..2807325 | + | 1208 | WP_089617520.1 | IS3 family transposase ISEcl1 | Transposase |
| E6P06_RS16995 () | 2807396..2808433 | + | 1038 | WP_003844127.1 | hypothetical protein | - |
| E6P06_RS17000 () | 2808639..2809073 | + | 435 | WP_041162689.1 | IS200-IS605 family transposase ISSod23 | Transposase |
| E6P06_RS17005 () | 2809131..2810012 | - | 882 | WP_003034964.1 | protease HtpX | - |
| E6P06_RS17010 () | 2810205..2812253 | - | 2049 | WP_049002329.1 | carboxy terminal-processing peptidase | - |
| E6P06_RS17015 () | 2812273..2812959 | - | 687 | WP_003034957.1 | RNA chaperone ProQ | - |
| E6P06_RS17020 () | 2813056..2813553 | - | 498 | WP_003034953.1 | GAF domain-containing protein | - |
| E6P06_RS17025 () | 2813682..2814965 | + | 1284 | WP_139935480.1 | membrane integrity lipid transport subunit YebS | - |
| E6P06_RS17030 () | 2814934..2817567 | + | 2634 | WP_016150396.1 | Thymidylate kinase | VF |
| E6P06_RS17035 () | 2817680..2819068 | + | 1389 | WP_199996021.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| E6P06_RS17040 () | 2819169..2819405 | + | 237 | WP_029139506.1 | DUF1480 family protein | - |
| E6P06_RS17045 () | 2819508..2819699 | + | 192 | WP_003034941.1 | YebW family protein | - |
| E6P06_RS17050 () | 2819700..2820341 | - | 642 | WP_003034937.1 | protein-serine/threonine phosphatase | - |
| - () | 2820490..2820633 | + | 144 | - | - | Antitoxin Detail |
| - () | 2820495..2820598 | - | 104 | - | - | Toxin Detail |
| E6P06_RS17055 () | 2820754..2821092 | - | 339 | WP_003034934.1 | YebY family protein | - |
| E6P06_RS17060 () | 2821113..2821985 | - | 873 | WP_003844135.1 | copper homeostasis membrane protein CopD | - |
| E6P06_RS17065 () | 2821989..2822363 | - | 375 | WP_003844136.1 | CopC domain-containing protein YobA | - |
| E6P06_RS17075 () | 2822989..2823576 | + | 588 | WP_106107223.1 | hypothetical protein | - |
| E6P06_RS17080 () | 2824069..2824260 | + | 192 | WP_008322661.1 | hypothetical protein | - |
| E6P06_RS17090 () | 2824580..2825482 | + | 903 | WP_003844140.1 | diguanylate cyclase | - |
| E6P06_RS17095 () | 2825836..2826414 | + | 579 | WP_071684716.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| E6P06_RS17100 () | 2826728..2827420 | - | 693 | WP_071684717.1 | inovirus-type Gp2 protein | - |
| E6P06_RS17105 () | 2827865..2829616 | - | 1752 | WP_019076528.1 | Deoxyguanosine kinase ; Integrase | Integrase |
| E6P06_RS17110 () | 2829765..2829995 | + | 231 | WP_003034925.1 | DNA polymerase III subunit theta | - |
| E6P06_RS17115 () | 2830102..2830758 | + | 657 | WP_003841657.1 | carbon-nitrogen hydrolase family protein | - |
| E6P06_RS17120 () | 2830782..2831444 | + | 663 | WP_003844144.1 | exodeoxyribonuclease X | - |
| E6P06_RS17125 () | 2831447..2833501 | - | 2055 | WP_003844145.1 | oligopeptidase B | - |
| E6P06_RS17130 () | 2833588..2834247 | - | 660 | WP_003844146.1 | tellurite resistance TerB family protein | - |
| E6P06_RS17135 () | 2834342..2834695 | - | 354 | WP_003034909.1 | protein YebF | - |
| E6P06_RS17140 () | 2834817..2835107 | - | 291 | WP_003034906.1 | DNA damage-inducible protein YebG | - |
| E6P06_RS17145 () | 2835239..2836417 | + | 1179 | WP_003844149.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| E6P06_RS17150 () | 2836485..2837126 | - | 642 | WP_003034901.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| E6P06_RS17155 () | 2837161..2838972 | - | 1812 | WP_003841668.1 | phosphogluconate dehydratase | - |
| E6P06_RS17160 () | 2839206..2840681 | - | 1476 | WP_003034896.1 | glucose-6-phosphate dehydrogenase | - |
| E6P06_RS17165 () | 2841049..2841918 | + | 870 | WP_003034893.1 | MurR/RpiR family transcriptional regulator | - |
| E6P06_RS17170 () | 2842037..2843479 | + | 1443 | WP_003034890.1 | pyruvate kinase | - |
| E6P06_RS17175 () | 2843524..2844495 | - | 972 | WP_003841672.1 | Beta sliding clamp | VF |
| E6P06_RS17180 () | 2844615..2845934 | - | 1320 | WP_003034883.1 | murein DD-endopeptidase MepM | - |
| E6P06_RS17185 () | 2845950..2846894 | - | 945 | WP_049002353.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| E6P06_RS17190 () | 2846973..2847728 | + | 756 | WP_003034877.1 | Ribonuclease P protein component | VF |
| E6P06_RS17195 () | 2847725..2848510 | + | 786 | WP_003034874.1 | Membrane protein insertase MisCA | VF |
| E6P06_RS17200 () | 2848589..2849599 | - | 1011 | WP_003034872.1 | Holliday junction branch migration DNA helicase RuvB | - |
| E6P06_RS17205 () | 2849608..2850219 | - | 612 | WP_003034869.1 | Holliday junction branch migration protein RuvA | - |
| E6P06_RS17210 () | 2850300..2850821 | - | 522 | WP_003034867.1 | crossover junction endodeoxyribonuclease RuvC | - |
| E6P06_RS17215 () | 2850856..2851599 | - | 744 | WP_003034865.1 | Ribosomal RNA small subunit methyltransferase G | VF |
| E6P06_RS17220 () | 2851628..2852071 | - | 444 | WP_003844155.1 | dihydroneopterin triphosphate diphosphatase | - |
| E6P06_RS17225 () | 2852073..2853845 | - | 1773 | WP_049002340.1 | aspartate--tRNA ligase | - |
| E6P06_RS17235 () | 2854112..2854678 | + | 567 | WP_003841685.1 | hydrolase | - |
| E6P06_RS17245 () | 2855032..2855271 | + | 240 | WP_139935482.1 | DinI family protein | - |
| E6P06_RS17250 () | 2855357..2855767 | - | 411 | WP_139935483.1 | hemerythrin domain-containing protein | - |
| E6P06_RS17255 () | 2855959..2856291 | - | 333 | WP_000506745.1 | hypothetical protein | - |
| E6P06_RS17260 () | 2856370..2856462 | + | 93 | Protein_2638 | DinI family protein | - |
| E6P06_RS17265 () | 2856462..2857739 | - | 1278 | Protein_2639 | phage tail tape measure protein | - |
| E6P06_RS17275 () | 2857881..2858150 | - | 270 | WP_000661045.1 | phage tail assembly protein | - |
| E6P06_RS17280 () | 2858150..2858506 | - | 357 | WP_049015471.1 | phage tail tube protein | - |
| E6P06_RS17285 () | 2858506..2859999 | - | 1494 | WP_139935484.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| E6P06_RS17290 () | 2859996..2860178 | - | 183 | WP_046671236.1 | DUF2635 domain-containing protein | - |
| E6P06_RS17295 () | 2860186..2860746 | - | 561 | WP_139935485.1 | hypothetical protein | - |
| E6P06_RS17300 () | 2860746..2861249 | - | 504 | WP_109862846.1 | hypothetical protein | - |
| E6P06_RS17305 () | 2861224..2861637 | - | 414 | WP_139935486.1 | phage head closure protein | - |
| E6P06_RS17310 () | 2861634..2861957 | - | 324 | WP_139935487.1 | head-tail connector protein | - |
| E6P06_RS17315 () | 2862031..2863248 | - | 1218 | WP_139935488.1 | phage major capsid protein | - |
| E6P06_RS17320 () | 2863258..2863857 | - | 600 | WP_045888755.1 | HK97 family phage prohead protease | - |
| E6P06_RS17325 () | 2863850..2864980 | - | 1131 | Protein_2650 | phage portal protein | - |
| E6P06_RS27755 () | 2864987..2865259 | - | 273 | Protein_2651 | RusA family crossover junction endodeoxyribonuclease | - |
| E6P06_RS17330 () | 2865256..2866081 | - | 826 | Protein_2652 | phage N-6-adenine-methyltransferase | - |
| E6P06_RS17335 () | 2866078..2866944 | - | 867 | WP_048221270.1 | conserved phage C-terminal domain-containing protein | - |
| E6P06_RS17340 () | 2866934..2867113 | - | 180 | WP_003034732.1 | DUF4222 domain-containing protein | - |
| E6P06_RS17345 () | 2867286..2867837 | - | 552 | WP_053390030.1 | hypothetical protein | - |
| E6P06_RS17350 () | 2867866..2868063 | - | 198 | WP_115601843.1 | hypothetical protein | - |
| E6P06_RS17355 () | 2868163..2868819 | + | 657 | WP_115602402.1 | helix-turn-helix domain-containing protein | - |
| E6P06_RS17360 () | 2869154..2869345 | - | 192 | WP_096757391.1 | hypothetical protein | - |
| E6P06_RS17365 () | 2869658..2870575 | + | 918 | WP_085049599.1 | recombination-associated protein RdgC | - |
| E6P06_RS17375 () | 2870961..2871500 | + | 540 | WP_046669975.1 | hypothetical protein | - |
| E6P06_RS27665 () | 2871488..2871664 | + | 177 | WP_001253787.1 | hypothetical protein | - |
| E6P06_RS17380 () | 2871661..2871915 | + | 255 | WP_139935489.1 | hypothetical protein | - |
| E6P06_RS17385 () | 2871936..2872130 | + | 195 | Protein_2663 | ead/Ea22-like family protein | - |
| E6P06_RS17390 () | 2872359..2872652 | + | 294 | WP_139935490.1 | hypothetical protein | - |
| E6P06_RS17395 () | 2872649..2873257 | + | 609 | WP_139935491.1 | hypothetical protein | - |
| E6P06_RS17400 () | 2873259..2873828 | + | 570 | WP_139935492.1 | 3'-5' exoribonuclease | - |
| E6P06_RS17405 () | 2873869..2874105 | + | 237 | WP_003839185.1 | excisionase family protein | - |
| E6P06_RS17410 () | 2874164..2875477 | + | 1314 | WP_139935493.1 | putative Nudix hydrolase NudL ; Integrase | Integrase |
| E6P06_RS17415 () | 2875456..2876229 | + | 774 | WP_168199061.1 | DUF72 domain-containing protein | - |
| E6P06_RS17420 () | 2876282..2876677 | + | 396 | WP_003034689.1 | MAPEG family protein | - |
| E6P06_RS17425 () | 2876718..2877461 | + | 744 | WP_003034686.1 | carboxy-S-adenosyl-L-methionine synthase CmoA | - |
| E6P06_RS17430 () | 2877458..2878426 | + | 969 | WP_003839177.1 | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | - |
| E6P06_RS17435 () | 2878670..2879416 | - | 747 | WP_016150525.1 | copper homeostasis protein CutC | - |
| E6P06_RS17440 () | 2879419..2879985 | - | 567 | WP_071684724.1 | VOC family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|