MGE detailed information
MGE type: Conjugative plasmid MGE length: 151402 bp
Accession: NZ_CP041048 Location: 1..151402 Organism: Citrobacter sp. CF971 Replicon: plasmid pBM527-2
Accession: NZ_CP041048 Location: 1..151402 Organism: Citrobacter sp. CF971 Replicon: plasmid pBM527-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E6P06_RS01825 () | 397..2232 | + | 1836 | WP_000053822.1 | type IV secretory system conjugative DNA transfer family protein | - |
| E6P06_RS01830 () | 2229..2621 | + | 393 | WP_000738524.1 | cag pathogenicity island Cag12 family protein | - |
| E6P06_RS01835 () | 2709..3023 | + | 315 | WP_000754496.1 | hypothetical protein | - |
| E6P06_RS01840 () | 3109..3435 | + | 327 | WP_004208538.1 | hypothetical protein | - |
| E6P06_RS01845 () | 3432..3926 | + | 495 | WP_001215543.1 | thermonuclease family protein | - |
| E6P06_RS01850 () | 4009..5271 | + | 1263 | WP_000517490.1 | ATP-binding protein | - |
| E6P06_RS01855 () | 5275..7602 | + | 2328 | WP_004199098.1 | type IA DNA topoisomerase | - |
| E6P06_RS01860 () | 7614..8069 | + | 456 | WP_001293458.1 | H-NS histone family protein | - |
| E6P06_RS01865 () | 8107..8757 | - | 651 | WP_000351937.1 | YkgJ family cysteine cluster protein | - |
| E6P06_RS01875 () | 9030..9209 | + | 180 | WP_000136657.1 | hypothetical protein | - |
| E6P06_RS01880 () | 9206..10027 | + | 822 | WP_000196235.1 | SprT-like domain-containing protein | - |
| E6P06_RS01885 () | 10137..10391 | + | 255 | WP_000510385.1 | hypothetical protein | - |
| E6P06_RS01890 () | 10409..10684 | + | 276 | WP_000557557.1 | hypothetical protein | - |
| E6P06_RS01895 () | 10747..10959 | + | 213 | WP_004221700.1 | hypothetical protein | - |
| E6P06_RS01900 () | 10917..11102 | + | 186 | WP_004221702.1 | hypothetical protein | - |
| E6P06_RS01905 () | 12078..12623 | - | 546 | Protein_16 | Tn3 family transposase TnpA_Tn3 | Transposase |
| E6P06_RS01910 () | 12767..15784 | + | 3018 | Protein_17 | Tn3 family transposase TnpA_IS3000 | Transposase |
| E6P06_RS01915 () | 16004..16867 | + | 864 | Protein_18 | IS30 family transposase ISAba125 | Transposase |
| E6P06_RS01920 () | 16899..17915 | + | 1017 | WP_139934930.1 | IS5 family transposase ISKpn26 | Transposase |
| E6P06_RS01925 () | 18037..18228 | + | 192 | Protein_20 | IS30 family transposase | - |
| E6P06_RS01930 () | 18329..19141 | + | 813 | WP_004201164.1 | hypothetical protein | ARG |
| E6P06_RS01935 () | 19145..19510 | + | 366 | WP_004201167.1 | bleomycin binding protein Ble-MBL | - |
| E6P06_RS01940 () | 19515..20153 | + | 639 | WP_004201168.1 | phosphoribosylanthranilate isomerase | - |
| E6P06_RS01945 () | 20164..21195 | - | 1032 | WP_004201169.1 | protein-disulfide reductase DsbD N-terminal domain-containing protein | - |
| E6P06_RS01950 () | 21200..21529 | - | 330 | WP_004201171.1 | divalent-cation tolerance protein CutA | - |
| E6P06_RS01955 () | 21723..22013 | + | 291 | WP_004201172.1 | co-chaperone GroES | - |
| E6P06_RS01960 () | 22069..23709 | + | 1641 | WP_004201176.1 | 60 kDa chaperonin | VF |
| E6P06_RS01965 () | 23898..25427 | + | 1530 | WP_015056392.1 | IS91 family transposase ISVsa3 | Transposase |
| E6P06_RS01975 () | 25638..25913 | - | 276 | WP_032723058.1 | hypothetical protein | - |
| E6P06_RS01980 () | 25943..26647 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| E6P06_RS01985 () | 26624..27379 | + | 756 | Protein_31 | IS110 family transposase IS4321 | Transposase |
| E6P06_RS01995 () | 28579..28752 | + | 174 | Protein_33 | IS110 family transposase | - |
| E6P06_RS02005 () | 29154..30194 | + | 1041 | WP_000101570.1 | DNA-binding protein | - |
| E6P06_RS02015 () | 30481..31992 | + | 1512 | WP_000811659.1 | ATP-dependent helicase | - |
| E6P06_RS02020 () | 32103..33143 | + | 1041 | WP_050009940.1 | conjugal transfer protein TraF | - |
| E6P06_RS02025 () | 33145..34578 | + | 1434 | WP_039272560.1 | conjugal transfer protein TraH | - |
| E6P06_RS02030 () | 34591..38196 | + | 3606 | WP_039272558.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| E6P06_RS02035 () | 38234..38596 | - | 363 | WP_039272556.1 | hypothetical protein | - |
| E6P06_RS02040 () | 39281..39553 | + | 273 | WP_039272554.1 | helix-turn-helix domain-containing protein | - |
| E6P06_RS02045 () | 39553..40086 | + | 534 | WP_000790612.1 | transglycosylase SLT domain-containing protein | - |
| E6P06_RS02050 () | 40097..40705 | + | 609 | WP_039272552.1 | hypothetical protein | - |
| E6P06_RS02055 () | 40702..41253 | + | 552 | WP_039272626.1 | hypothetical protein | - |
| E6P06_RS02060 () | 41310..41729 | - | 420 | WP_001209046.1 | H-NS histone family protein | - |
| E6P06_RS02065 () | 41731..42024 | - | 294 | WP_039272549.1 | hypothetical protein | - |
| E6P06_RS02070 () | 42041..43024 | - | 984 | WP_000077456.1 | ParM/StbA family protein | - |
| E6P06_RS02075 () | 43534..44073 | + | 540 | WP_001553111.1 | hypothetical protein | - |
| E6P06_RS02080 () | 44078..44365 | + | 288 | WP_000213810.1 | hypothetical protein | - |
| E6P06_RS02085 () | 44350..45450 | + | 1101 | WP_001553110.1 | hypothetical protein | - |
| E6P06_RS02100 () | 46468..46902 | - | 435 | WP_039272545.1 | hypothetical protein | - |
| E6P06_RS02105 () | 46920..48035 | - | 1116 | WP_058662819.1 | phosphoadenosine phosphosulfate reductase family protein | - |
| E6P06_RS02110 () | 48302..48910 | + | 609 | WP_000849066.1 | hypothetical protein | - |
| E6P06_RS02115 () | 48915..49436 | + | 522 | WP_058662818.1 | hypothetical protein | - |
| E6P06_RS02120 () | 49439..49960 | + | 522 | WP_000648874.1 | hypothetical protein | - |
| E6P06_RS02125 () | 50057..50530 | + | 474 | WP_161477179.1 | hypothetical protein | - |
| E6P06_RS02130 () | 50541..50834 | + | 294 | WP_001553058.1 | hypothetical protein | - |
| E6P06_RS02135 () | 50839..51693 | + | 855 | WP_000539390.1 | hypothetical protein | - |
| E6P06_RS02140 () | 51693..52652 | + | 960 | WP_000841048.1 | S49 family peptidase | - |
| E6P06_RS02145 () | 52668..53528 | + | 861 | WP_001115073.1 | DsbA family protein | - |
| E6P06_RS02150 () | 53745..54191 | + | 447 | WP_058662817.1 | hypothetical protein | - |
| E6P06_RS02155 () | 54188..54706 | + | 519 | WP_058662816.1 | hypothetical protein | - |
| E6P06_RS02160 () | 54706..54936 | + | 231 | WP_058662815.1 | hypothetical protein | - |
| E6P06_RS02165 () | 54923..55780 | + | 858 | WP_058662814.1 | hypothetical protein | - |
| E6P06_RS02170 () | 55830..56348 | + | 519 | WP_023356327.1 | thermonuclease family protein | - |
| E6P06_RS02175 () | 56406..56678 | + | 273 | WP_058662813.1 | HU family DNA-binding protein | - |
| E6P06_RS02180 () | 56768..57064 | + | 297 | WP_058662820.1 | hypothetical protein | - |
| E6P06_RS02185 () | 57379..57747 | + | 369 | WP_131777513.1 | hypothetical protein | - |
| E6P06_RS02190 () | 57877..58326 | + | 450 | WP_058662811.1 | hypothetical protein | - |
| E6P06_RS02195 () | 58308..58616 | + | 309 | WP_000383038.1 | hypothetical protein | - |
| E6P06_RS02200 () | 58793..59578 | + | 786 | WP_001151303.1 | Iron-sulfur cluster carrier protein | VF |
| E6P06_RS02205 () | 59582..60760 | + | 1179 | WP_058662810.1 | ParB/RepB/Spo0J family partition protein | - |
| E6P06_RS02210 () | 60809..61081 | + | 273 | WP_000703826.1 | helix-turn-helix domain-containing protein | - |
| E6P06_RS02215 () | 61180..61356 | - | 177 | Protein_73 | restriction endonuclease subunit M | - |
| E6P06_RS27570 () | 61444..61587 | - | 144 | WP_000939032.1 | hypothetical protein | - |
| E6P06_RS02220 () | 61905..62339 | + | 435 | WP_039272498.1 | hypothetical protein | - |
| E6P06_RS02225 () | 62369..63043 | + | 675 | WP_000344152.1 | hypothetical protein | - |
| E6P06_RS02230 () | 63111..63542 | + | 432 | WP_000336413.1 | hypothetical protein | - |
| E6P06_RS02235 () | 63548..63871 | + | 324 | WP_001553028.1 | hypothetical protein | - |
| E6P06_RS02240 () | 63868..65022 | + | 1155 | Protein_79 | DNA cytosine methyltransferase | - |
| E6P06_RS02250 () | 65206..65439 | - | 234 | WP_039272424.1 | hypothetical protein | - |
| E6P06_RS02255 () | 65421..66038 | - | 618 | WP_012766323.1 | hypothetical protein | - |
| E6P06_RS02260 () | 66206..69169 | + | 2964 | WP_058662807.1 | hypothetical protein | Relaxase |
| E6P06_RS02265 () | 69166..71031 | + | 1866 | WP_000178858.1 | conjugative transfer system coupling protein TraD | - |
| E6P06_RS02270 () | 71042..71626 | + | 585 | WP_000332867.1 | hypothetical protein | - |
| E6P06_RS02275 () | 71583..72212 | + | 630 | WP_000743448.1 | DUF4400 domain-containing protein | - |
| E6P06_RS02280 () | 72223..72669 | + | 447 | WP_039272421.1 | hypothetical protein | - |
| E6P06_RS02285 () | 72679..73056 | + | 378 | WP_000869260.1 | hypothetical protein | - |
| E6P06_RS02290 () | 73056..73718 | + | 663 | WP_039272419.1 | hypothetical protein | - |
| E6P06_RS27575 () | 73897..74040 | + | 144 | WP_168199038.1 | hypothetical protein | - |
| E6P06_RS02295 () | 74086..74400 | + | 315 | WP_051479472.1 | hypothetical protein | - |
| E6P06_RS02300 () | 74543..74824 | + | 282 | WP_000805626.1 | type IV conjugative transfer system protein TraL | - |
| E6P06_RS02305 () | 74821..75447 | + | 627 | WP_039272415.1 | pilus assembly protein | - |
| E6P06_RS02310 () | 75431..75688 | + | 258 | Protein_93 | conjugal transfer protein TraK | - |
| E6P06_RS02315 () | 75752..76051 | + | 300 | WP_023356357.1 | hypothetical protein | - |
| E6P06_RS02320 () | 76124..76678 | + | 555 | WP_001093866.1 | hypothetical protein | - |
| E6P06_RS02325 () | 76911..77297 | + | 387 | WP_000042273.1 | hypothetical protein | - |
| E6P06_RS02330 () | 77383..79836 | + | 2454 | WP_058662802.1 | hypothetical protein | - |
| E6P06_RS02335 () | 80326..81000 | + | 675 | WP_168199039.1 | toprim domain-containing protein | - |
| E6P06_RS02340 () | 80987..81265 | + | 279 | WP_001144046.1 | hypothetical protein | - |
| E6P06_RS02345 () | 81338..81577 | + | 240 | WP_000714161.1 | hypothetical protein | - |
| E6P06_RS27580 () | 81587..81703 | + | 117 | WP_000991086.1 | hypothetical protein | - |
| E6P06_RS02350 () | 81970..82581 | + | 612 | WP_058662801.1 | hypothetical protein | - |
| E6P06_RS02355 () | 82952..83677 | + | 726 | WP_001553093.1 | hypothetical protein | - |
| E6P06_RS02360 () | 83733..84185 | + | 453 | WP_001553092.1 | hypothetical protein | - |
| E6P06_RS02365 () | 84201..84779 | - | 579 | WP_139934931.1 | hypothetical protein | - |
| E6P06_RS02370 () | 85117..86379 | + | 1263 | WP_000608644.1 | IS1380 family transposase ISEcp1 | Transposase |
| E6P06_RS02375 () | 86714..87589 | + | 876 | WP_011091028.1 | hypothetical protein | ARG |
| E6P06_RS02380 () | 87636..88112 | - | 477 | WP_013023839.1 | WbuC family cupin fold metalloprotein | - |
| E6P06_RS02385 () | 88371..89231 | - | 861 | WP_000027057.1 | hypothetical protein | ARG |
| E6P06_RS02390 () | 89414..89971 | - | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| E6P06_RS02395 () | 90135..93140 | + | 3006 | WP_001143760.1 | Tn3 family transposase TnpA_Tn3 | Transposase |
| E6P06_RS02400 () | 93441..93722 | + | 282 | WP_000575656.1 | hypothetical protein | - |
| E6P06_RS02405 () | 93741..94304 | + | 564 | WP_001132404.1 | hypothetical protein | - |
| E6P06_RS02410 () | 94307..95311 | + | 1005 | WP_039272368.1 | tyrosine-type recombinase/integrase | - |
| E6P06_RS02415 () | 95676..95927 | + | 252 | WP_039272366.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| E6P06_RS02420 () | 95937..97244 | + | 1308 | WP_024134513.1 | type II toxin-antitoxin system HipA family toxin | Toxin Detail |
| E6P06_RS02425 () | 97241..97735 | + | 495 | WP_039272364.1 | hypothetical protein | - |
| E6P06_RS02430 () | 97910..98848 | - | 939 | WP_044596315.1 | hypothetical protein | - |
| E6P06_RS02435 () | 99047..100687 | + | 1641 | WP_031611419.1 | hypothetical protein | VF |
| E6P06_RS02445 () | 101059..101361 | - | 303 | WP_031611417.1 | hypothetical protein | - |
| E6P06_RS02450 () | 101633..102454 | + | 822 | Protein_121 | hypothetical protein | - |
| E6P06_RS02455 () | 102489..105455 | - | 2967 | WP_001138014.1 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| E6P06_RS02460 () | 105459..106019 | - | 561 | WP_001161490.1 | Tn3 family transposase TnpR_TnAs1 | Transposase |
| E6P06_RS02465 () | 106195..106545 | - | 351 | WP_000454193.1 | DUF3330 domain-containing protein | - |
| E6P06_RS02475 () | 106748..107761 | - | 1014 | WP_000845039.1 | IS91 family transposase ISAzo26 | Transposase |
| E6P06_RS02480 () | 107928..108728 | + | 801 | WP_013263789.1 | hypothetical protein | ARG |
| E6P06_RS02485 () | 108836..109390 | + | 555 | WP_003159191.1 | aminoglycoside N-acetyltransferase AAC(6')-Ib4 | - |
| E6P06_RS02490 () | 109461..110255 | + | 795 | WP_019407932.1 | hypothetical protein | ARG |
| E6P06_RS02495 () | 110372..111163 | + | 792 | WP_001206317.1 | hypothetical protein | ARG |
| E6P06_RS02500 () | 111216..111848 | + | 633 | WP_012477387.1 | 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase | VF |
| E6P06_RS02505 () | 112017..112364 | + | 348 | WP_000679427.1 | Spermidine export protein MdtJ | ARG |
| E6P06_RS02510 () | 112358..113197 | + | 840 | WP_000259031.1 | hypothetical protein | ARG |
| E6P06_RS02520 () | 113325..113825 | + | 501 | WP_000376623.1 | GNAT family N-acetyltransferase | - |
| E6P06_RS02525 () | 113882..114781 | - | 900 | WP_011899345.1 | TniB family NTP-binding protein | - |
| E6P06_RS02530 () | 114784..116454 | - | 1671 | WP_139934932.1 | DDE-type integrase/transposase/recombinase | - |
| E6P06_RS02535 () | 116460..117164 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| E6P06_RS02540 () | 117176..117484 | - | 309 | WP_001277461.1 | IS6 family transposase IS15 | Transposase |
| E6P06_RS02545 () | 117502..119184 | - | 1683 | WP_000281124.1 | mercury(II) reductase | - |
| E6P06_RS02550 () | 119223..119630 | - | 408 | WP_000523860.1 | organomercurial transporter MerC | - |
| E6P06_RS02555 () | 119658..119939 | - | 282 | WP_000732277.1 | mercury resistance system periplasmic binding protein MerP | - |
| E6P06_RS02560 () | 119955..120305 | - | 351 | WP_001294665.1 | mercuric ion transporter MerT | - |
| E6P06_RS02565 () | 120377..120832 | + | 456 | WP_139934933.1 | IS607 family transposase ISChh1 | Transposase |
| E6P06_RS02570 () | 120864..121433 | + | 570 | Protein_143 | hypothetical protein | - |
| E6P06_RS02575 () | 121837..122715 | + | 879 | WP_058663130.1 | DNA replication terminus site-binding protein | - |
| E6P06_RS02580 () | 123085..123258 | + | 174 | Protein_145 | IS110 family transposase IS4321 | Transposase |
| E6P06_RS02585 () | 123310..124014 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| E6P06_RS02595 () | 124151..125011 | + | 861 | WP_002904004.1 | hypothetical protein | ARG |
| E6P06_RS02600 () | 125032..125793 | - | 762 | WP_002210513.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| E6P06_RS02610 () | 126055..126579 | + | 525 | Protein_149 | NAD(P)-dependent oxidoreductase | - |
| E6P06_RS02615 () | 126634..127338 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| E6P06_RS02630 () | 127731..127970 | - | 240 | WP_001549892.1 | hypothetical protein | - |
| E6P06_RS02635 () | 128072..129292 | + | 1221 | WP_000343760.1 | ISL3 family transposase ISKox3 | Transposase |
| E6P06_RS02640 () | 129381..130043 | - | 663 | WP_001549893.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| E6P06_RS02645 () | 130424..131086 | + | 663 | WP_000516402.1 | peptidyl-arginine deiminase | - |
| E6P06_RS02650 () | 131186..131470 | + | 285 | WP_001185481.1 | hypothetical protein | - |
| E6P06_RS02655 () | 131676..131987 | + | 312 | WP_000469598.1 | hypothetical protein | - |
| E6P06_RS02660 () | 132023..132307 | + | 285 | WP_001043731.1 | hypothetical protein | - |
| E6P06_RS02665 () | 132328..132750 | - | 423 | WP_015060034.1 | TaxD | - |
| E6P06_RS02670 () | 132869..133312 | - | 444 | WP_001074369.1 | hypothetical protein | - |
| E6P06_RS02675 () | 133321..134334 | - | 1014 | WP_001348704.1 | replication initiation protein | - |
| E6P06_RS02680 () | 134945..135097 | + | 153 | Protein_161 | DNA-binding protein | - |
| E6P06_RS27590 () | 135275..135433 | - | 159 | WP_152913118.1 | hypothetical protein | - |
| E6P06_RS02685 () | 135687..136202 | + | 516 | WP_139934934.1 | DnaJ domain-containing protein | - |
| E6P06_RS02690 () | 136261..136497 | + | 237 | WP_000792381.1 | hypothetical protein | - |
| E6P06_RS02695 () | 136557..137108 | + | 552 | WP_000662998.1 | hypothetical protein | - |
| E6P06_RS02700 () | 137174..137386 | + | 213 | WP_004208549.1 | hypothetical protein | - |
| E6P06_RS02705 () | 137376..137618 | + | 243 | WP_000008707.1 | hypothetical protein | - |
| E6P06_RS02710 () | 137712..138050 | + | 339 | WP_001099725.1 | hypothetical protein | - |
| E6P06_RS27595 () | 138125..138289 | + | 165 | WP_000004083.1 | hypothetical protein | - |
| E6P06_RS02715 () | 138286..138543 | + | 258 | WP_004199355.1 | hypothetical protein | - |
| E6P06_RS27730 () | 138815..138889 | + | 75 | Protein_171 | DNA distortion polypeptide 1 | - |
| E6P06_RS02725 () | 138884..139429 | + | 546 | WP_001348698.1 | hypothetical protein | - |
| E6P06_RS02730 () | 139432..140592 | + | 1161 | WP_004199101.1 | hypothetical protein | Relaxase |
| E6P06_RS02735 () | 140945..141454 | + | 510 | WP_000455437.1 | transcription termination factor NusG | - |
| E6P06_RS02740 () | 141405..141641 | + | 237 | WP_001348696.1 | hypothetical protein | - |
| E6P06_RS02745 () | 141687..142331 | + | 645 | WP_000953538.1 | hypothetical protein | VF |
| E6P06_RS02750 () | 142315..142605 | + | 291 | WP_000916156.1 | TrbC/VirB2 family protein | - |
| E6P06_RS02755 () | 142630..145383 | + | 2754 | WP_015060057.1 | hypothetical protein | VF |
| E6P06_RS02760 () | 145393..146163 | + | 771 | WP_000716326.1 | pilus assembly protein | - |
| E6P06_RS02765 () | 146173..146430 | + | 258 | WP_000759841.1 | EexN family lipoprotein | - |
| E6P06_RS02770 () | 146442..147497 | + | 1056 | WP_000235886.1 | hypothetical protein | VF |
| E6P06_RS02775 () | 147692..148420 | + | 729 | WP_004199085.1 | hypothetical protein | VF |
| E6P06_RS02780 () | 148426..149355 | + | 930 | WP_000783386.1 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| E6P06_RS02785 () | 149352..150566 | + | 1215 | WP_001295060.1 | hypothetical protein | VF |
| E6P06_RS02790 () | 150568..150765 | + | 198 | WP_000629109.1 | DNA-binding protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|