MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 108568 bp
Accession: NZ_CP041025 Location: 2176812..2285379 Organism: Paremcibacter congregatus strain ZYLT Replicon: chromosome
Accession: NZ_CP041025 Location: 2176812..2285379 Organism: Paremcibacter congregatus strain ZYLT Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FIV45_RS09845 () | 2172118..2172723 | + | 606 | WP_099474952.1 | hypothetical protein | - |
| FIV45_RS09850 () | 2172904..2173737 | + | 834 | WP_099474953.1 | transporter substrate-binding domain-containing protein | - |
| FIV45_RS09855 () | 2173753..2175390 | - | 1638 | WP_165777090.1 | HAMP domain-containing protein | - |
| FIV45_RS09860 () | 2175542..2176141 | - | 600 | WP_099474955.1 | hypothetical protein | - |
| FIV45_RS18600 () | 2176815..2177483 | - | 669 | WP_204602370.1 | recombinase zinc beta ribbon domain-containing protein | - |
| FIV45_RS18605 () | 2177901..2178404 | - | 504 | Protein_1961 | recombinase family protein | - |
| FIV45_RS09875 () | 2179284..2179640 | + | 357 | WP_204602359.1 | DUF2384 domain-containing protein | Antitoxin Detail |
| FIV45_RS09880 () | 2179627..2180385 | + | 759 | WP_204602361.1 | RES domain-containing protein | Toxin Detail |
| FIV45_RS09885 () | 2180412..2180651 | - | 240 | WP_099474959.1 | hypothetical protein | - |
| FIV45_RS09890 () | 2180704..2180895 | - | 192 | WP_099474960.1 | hypothetical protein | - |
| FIV45_RS09895 () | 2181259..2181867 | - | 609 | WP_099474961.1 | zeta toxin family protein | - |
| FIV45_RS09900 () | 2181876..2182214 | - | 339 | WP_099475022.1 | ParD-like family protein | - |
| FIV45_RS09910 () | 2182814..2185969 | - | 3156 | WP_133118615.1 | efflux RND transporter permease subunit | - |
| FIV45_RS09915 () | 2186086..2187276 | - | 1191 | WP_099474963.1 | HlyD family efflux transporter periplasmic adaptor subunit | - |
| FIV45_RS09920 () | 2187307..2188707 | - | 1401 | WP_099474964.1 | TolC family protein | - |
| FIV45_RS09925 () | 2188971..2189693 | + | 723 | WP_099474965.1 | Transcriptional regulatory protein OmpR | VF |
| FIV45_RS09930 () | 2189690..2191063 | + | 1374 | WP_099474966.1 | HAMP domain-containing histidine kinase | - |
| FIV45_RS09935 () | 2191351..2191773 | - | 423 | WP_099474967.1 | nuclear transport factor 2 family protein | - |
| FIV45_RS09940 () | 2192349..2192546 | - | 198 | WP_099474968.1 | hypothetical protein | - |
| FIV45_RS09945 () | 2192695..2193384 | + | 690 | WP_099474969.1 | carboxymuconolactone decarboxylase family protein | - |
| FIV45_RS09950 () | 2193384..2195912 | + | 2529 | WP_099474970.1 | CoA transferase | - |
| FIV45_RS09955 () | 2195948..2196298 | + | 351 | WP_099474971.1 | helix-turn-helix transcriptional regulator | - |
| FIV45_RS09960 () | 2196365..2197243 | + | 879 | WP_165777091.1 | SDR family NAD(P)-dependent oxidoreductase | - |
| FIV45_RS09965 () | 2197243..2199162 | + | 1920 | WP_099474973.1 | acyl-CoA synthetase | - |
| FIV45_RS09970 () | 2199264..2199698 | + | 435 | WP_099474974.1 | carboxymuconolactone decarboxylase family protein | - |
| FIV45_RS09975 () | 2199668..2200612 | + | 945 | WP_204602363.1 | RNA polymerase sigma factor SigJ | - |
| FIV45_RS09980 () | 2200628..2201965 | - | 1338 | WP_099474976.1 | GHKL domain-containing protein | - |
| FIV45_RS09985 () | 2202021..2203406 | - | 1386 | WP_099474977.1 | Alginate biosynthesis transcriptional regulatory protein AlgB | VF |
| FIV45_RS09990 () | 2203528..2204316 | - | 789 | WP_099474978.1 | DUF2306 domain-containing protein | - |
| FIV45_RS09995 () | 2204341..2206770 | - | 2430 | WP_099474979.1 | ABC transporter permease | - |
| FIV45_RS10000 () | 2206767..2207489 | - | 723 | WP_099474980.1 | putative ABC transporter ATP-binding protein YknY | VF |
| FIV45_RS10005 () | 2207533..2208792 | - | 1260 | WP_099474981.1 | HlyD family efflux transporter periplasmic adaptor subunit | - |
| FIV45_RS10010 () | 2209134..2209898 | - | 765 | WP_099474982.1 | hypothetical protein | - |
| FIV45_RS10015 () | 2209924..2210238 | - | 315 | WP_099474983.1 | hypothetical protein | - |
| FIV45_RS10020 () | 2210398..2210796 | - | 399 | WP_099474984.1 | hypothetical protein | - |
| FIV45_RS10025 () | 2210833..2211654 | - | 822 | WP_165777092.1 | alpha/beta fold hydrolase | - |
| FIV45_RS10030 () | 2211855..2212145 | - | 291 | WP_099474986.1 | DUF1330 domain-containing protein | - |
| FIV45_RS10035 () | 2212175..2213269 | - | 1095 | WP_099474987.1 | NmrA family NAD(P)-binding protein | - |
| FIV45_RS10040 () | 2213350..2213784 | - | 435 | WP_099474988.1 | MarR family transcriptional regulator | - |
| FIV45_RS10045 () | 2214107..2215114 | - | 1008 | WP_099474989.1 | adenosine deaminase | - |
| FIV45_RS10050 () | 2215111..2216043 | - | 933 | WP_099474990.1 | nucleoside hydrolase | - |
| FIV45_RS10055 () | 2216205..2217047 | + | 843 | WP_133118616.1 | LysR family transcriptional regulator | - |
| FIV45_RS10060 () | 2217240..2217380 | - | 141 | WP_204602365.1 | hypothetical protein | - |
| FIV45_RS10065 () | 2217514..2217804 | + | 291 | WP_099474992.1 | DUF3363 domain-containing protein | - |
| FIV45_RS10070 () | 2217925..2219247 | + | 1323 | WP_165777094.1 | PLP-dependent aminotransferase family protein | - |
| FIV45_RS10075 () | 2219340..2220524 | + | 1185 | WP_139932329.1 | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | - |
| FIV45_RS10080 () | 2220689..2222959 | - | 2271 | WP_204601934.1 | molybdopterin-dependent oxidoreductase | - |
| FIV45_RS10085 () | 2222956..2223444 | - | 489 | WP_099470722.1 | (2Fe-2S)-binding protein | - |
| FIV45_RS10090 () | 2224330..2224527 | + | 198 | WP_099470723.1 | dihydrofolate reductase family protein | - |
| FIV45_RS10095 () | 2224786..2225043 | - | 258 | WP_099470724.1 | hypothetical protein | - |
| FIV45_RS10100 () | 2225061..2225309 | - | 249 | WP_099470725.1 | DUF2274 domain-containing protein | - |
| FIV45_RS10105 () | 2225309..2226532 | - | 1224 | WP_099470726.1 | Type IV secretion system protein virB10 | VF |
| FIV45_RS10110 () | 2226529..2227515 | - | 987 | WP_099470727.1 | P-type conjugative transfer protein TrbG | - |
| FIV45_RS10115 () | 2227512..2228213 | - | 702 | WP_099470728.1 | conjugal transfer protein TrbF | - |
| FIV45_RS10120 () | 2228210..2229475 | - | 1266 | WP_099470729.1 | P-type conjugative transfer protein TrbL | - |
| FIV45_RS10125 () | 2229599..2230321 | - | 723 | WP_099470730.1 | P-type conjugative transfer protein TrbJ | - |
| FIV45_RS10130 () | 2230311..2232728 | - | 2418 | WP_099470731.1 | conjugal transfer protein TrbE | - |
| FIV45_RS10135 () | 2232728..2232982 | - | 255 | WP_099470732.1 | VirB3 family type IV secretion system protein | - |
| FIV45_RS10140 () | 2232982..2233314 | - | 333 | WP_099470733.1 | TrbC/VirB2 family protein | - |
| FIV45_RS10145 () | 2233338..2234312 | - | 975 | WP_204601936.1 | Type IV secretion system protein VirB11 | VF |
| FIV45_RS10150 () | 2234296..2234748 | - | 453 | WP_099470734.1 | CopG family transcriptional regulator | - |
| FIV45_RS10155 () | 2234750..2236786 | - | 2037 | WP_099470735.1 | Conjugal transfer protein TraG | VF |
| FIV45_RS10160 () | 2237211..2238116 | - | 906 | WP_204601938.1 | DNA adenine methylase | - |
| FIV45_RS10165 () | 2238145..2239167 | - | 1023 | WP_099470736.1 | hypothetical protein | - |
| FIV45_RS10170 () | 2239184..2240308 | - | 1125 | WP_099470737.1 | ParB N-terminal domain-containing protein | - |
| FIV45_RS10175 () | 2240508..2242280 | - | 1773 | WP_165776842.1 | DUF3363 domain-containing protein | - |
| FIV45_RS10180 () | 2242768..2243280 | - | 513 | WP_165776843.1 | S26 family signal peptidase | - |
| FIV45_RS10185 () | 2243277..2243741 | - | 465 | WP_099470740.1 | DUF2840 domain-containing protein | - |
| FIV45_RS10190 () | 2243738..2244127 | - | 390 | WP_099470741.1 | helix-turn-helix domain-containing protein | - |
| FIV45_RS18465 () | 2244420..2244656 | - | 237 | WP_165776844.1 | DUF2285 domain-containing protein | - |
| FIV45_RS10200 () | 2245039..2245299 | - | 261 | WP_099470743.1 | hypothetical protein | - |
| FIV45_RS10205 () | 2245622..2246230 | - | 609 | WP_165776845.1 | isochorismatase family protein | - |
| FIV45_RS10210 () | 2246227..2247282 | - | 1056 | WP_099470745.1 | branched-chain amino acid aminotransferase | - |
| FIV45_RS10215 () | 2247866..2249062 | - | 1197 | WP_139932330.1 | acetyl-CoA C-acyltransferase | - |
| FIV45_RS10220 () | 2249066..2250052 | - | 987 | WP_139932331.1 | Putative short-chain type dehydrogenase/reductase | VF |
| FIV45_RS10225 () | 2250138..2250614 | - | 477 | WP_139932332.1 | MaoC family dehydratase | - |
| FIV45_RS10230 () | 2250681..2251928 | - | 1248 | WP_099471953.1 | hypothetical protein | - |
| FIV45_RS10235 () | 2251925..2253514 | - | 1590 | WP_204602103.1 | M81 family metallopeptidase | - |
| FIV45_RS10240 () | 2253544..2254281 | - | 738 | WP_099471961.1 | amino acid racemase | - |
| FIV45_RS10245 () | 2254497..2256128 | - | 1632 | WP_099471955.1 | amidohydrolase family protein | - |
| FIV45_RS10250 () | 2256293..2257174 | - | 882 | WP_099471956.1 | amidohydrolase family protein | - |
| FIV45_RS10255 () | 2257171..2258787 | - | 1617 | WP_204844750.1 | AMP-binding protein | - |
| FIV45_RS10260 () | 2258884..2260224 | - | 1341 | WP_099470707.1 | APC family permease | - |
| FIV45_RS10265 () | 2260253..2261497 | - | 1245 | WP_165776837.1 | serine hydrolase | - |
| FIV45_RS10270 () | 2261588..2262280 | - | 693 | WP_165776838.1 | peptidylprolyl isomerase | - |
| FIV45_RS10275 () | 2262338..2264932 | - | 2595 | WP_099470710.1 | twin-arginine translocation signal domain-containing protein | - |
| FIV45_RS10280 () | 2265156..2267786 | - | 2631 | WP_099472333.1 | TonB-dependent receptor | - |
| FIV45_RS10285 () | 2268035..2269087 | - | 1053 | WP_099472334.1 | FecR domain-containing protein | - |
| FIV45_RS10290 () | 2269084..2269683 | - | 600 | WP_099472335.1 | sigma-70 family RNA polymerase sigma factor | - |
| FIV45_RS10295 () | 2269873..2270091 | - | 219 | WP_099472336.1 | DUF2274 domain-containing protein | - |
| FIV45_RS10300 () | 2270106..2271221 | - | 1116 | WP_099472337.1 | Conjugal transfer protein TraG | VF |
| FIV45_RS10305 () | 2271867..2273069 | + | 1203 | WP_099472338.1 | Serine/threonine-protein kinase toxin HipA | VF |
| FIV45_RS10310 () | 2273056..2273268 | + | 213 | WP_165776984.1 | helix-turn-helix domain-containing protein | - |
| FIV45_RS18470 () | 2273385..2273615 | - | 231 | WP_181040056.1 | IS3 family transposase ISMch1 | Transposase |
| FIV45_RS10320 () | 2273907..2274657 | - | 751 | Protein_2050 | IS21 family transposase ISVapa2 | Transposase |
| FIV45_RS18610 () | 2274654..2275484 | - | 831 | WP_204844752.1 | IS21 family transposase ISGur15 | Transposase |
| FIV45_RS18615 () | 2275939..2276193 | - | 255 | WP_204602158.1 | IS21 family transposase ISAisp6 | Transposase |
| FIV45_RS10330 () | 2276237..2276593 | - | 357 | WP_099472369.1 | IS4 family transposase ISCja2 | Transposase |
| FIV45_RS10335 () | 2277196..2277903 | + | 708 | WP_099472368.1 | hypothetical protein | - |
| FIV45_RS10340 () | 2277969..2278502 | + | 534 | WP_181040057.1 | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | - |
| FIV45_RS10345 () | 2278595..2279677 | + | 1083 | WP_139932336.1 | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | - |
| FIV45_RS10350 () | 2279785..2280198 | + | 414 | WP_181040058.1 | IS3 family transposase ISMch1 | Transposase |
| FIV45_RS10355 () | 2281348..2282202 | - | 855 | WP_181040059.1 | Hercynine oxygenase | VF |
| FIV45_RS10360 () | 2282205..2282405 | - | 201 | WP_165776847.1 | toxin-activating lysine-acyltransferase | - |
| FIV45_RS10365 () | 2282617..2283054 | - | 438 | WP_099470750.1 | sel1 repeat family protein | - |
| FIV45_RS10370 () | 2283246..2283869 | - | 624 | WP_204601940.1 | hypothetical protein | - |
| FIV45_RS10375 () | 2284035..2284649 | - | 615 | WP_099470749.1 | hypothetical protein | - |
| FIV45_RS10380 () | 2285563..2285757 | + | 195 | WP_099472302.1 | hypothetical protein | - |
| FIV45_RS10385 () | 2285884..2288427 | - | 2544 | WP_099472301.1 | TonB-dependent receptor | - |
| FIV45_RS10390 () | 2288594..2288839 | + | 246 | WP_204602144.1 | hypothetical protein | - |
| FIV45_RS10395 () | 2288961..2289539 | + | 579 | WP_099472300.1 | sigma-70 family RNA polymerase sigma factor | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|