MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 60848 bp
Accession: NZ_CP041019 Location: 1..60848 Organism: Sphingobium fuliginis ATCC 27551 Replicon: plasmid pSF2
Accession: NZ_CP041019 Location: 1..60848 Organism: Sphingobium fuliginis ATCC 27551 Replicon: plasmid pSF2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FIL70_RS24860 () | 49..1074 | + | 1026 | WP_140043560.1 | adenosine deaminase | - |
| FIL70_RS24865 () | 1187..2247 | - | 1061 | Protein_1 | IS3 family transposase | - |
| FIL70_RS24870 () | 2439..4184 | - | 1746 | WP_208759667.1 | response regulator | - |
| FIL70_RS24875 () | 4337..5101 | - | 765 | WP_006949122.1 | IS6 family transposase | - |
| FIL70_RS24885 () | 5361..6065 | + | 705 | WP_019053929.1 | SprT-like domain-containing protein | - |
| FIL70_RS24890 () | 6084..6320 | + | 237 | WP_006954175.1 | hypothetical protein | - |
| FIL70_RS24895 () | 6825..7901 | + | 1077 | WP_019053930.1 | hypothetical protein | - |
| FIL70_RS24900 () | 8049..8753 | + | 705 | WP_014194362.1 | DNA adenine methylase | - |
| FIL70_RS25920 () | 8971..9135 | + | 165 | WP_019053931.1 | hypothetical protein | - |
| FIL70_RS25925 () | 9146..9295 | - | 150 | WP_006954178.1 | hypothetical protein | - |
| FIL70_RS24905 () | 9443..9688 | - | 246 | WP_019053933.1 | helix-turn-helix domain-containing protein | - |
| FIL70_RS24910 () | 9715..10116 | + | 402 | WP_019053934.1 | hypothetical protein | - |
| FIL70_RS24915 () | 10118..13477 | - | 3360 | WP_006954183.1 | DUF1738 domain-containing protein | - |
| FIL70_RS24920 () | 13496..13747 | - | 252 | WP_006954184.1 | hypothetical protein | - |
| FIL70_RS24925 () | 13744..15923 | - | 2180 | Protein_14 | DNA topoisomerase 3 | - |
| FIL70_RS24930 () | 15928..16461 | - | 534 | WP_006954186.1 | conjugative transfer signal peptidase TraF | - |
| FIL70_RS24935 () | 16458..18350 | - | 1893 | WP_072599014.1 | type IV secretory system conjugative DNA transfer family protein | - |
| FIL70_RS24940 () | 18372..20690 | - | 2319 | WP_019053938.1 | relaxase/mobilization nuclease domain-containing protein | - |
| FIL70_RS24945 () | 20707..21093 | - | 387 | WP_006954189.1 | IncP-type oriT-binding protein TraJ | - |
| FIL70_RS25930 () | 21377..21793 | + | 417 | WP_167706886.1 | TraK family protein | - |
| FIL70_RS24950 () | 21790..22515 | + | 726 | WP_026149851.1 | conjugal transfer protein TraL | - |
| FIL70_RS24955 () | 22515..22955 | + | 441 | WP_019053940.1 | hypothetical protein | - |
| FIL70_RS24960 () | 22986..23618 | - | 633 | WP_019053941.1 | hypothetical protein | - |
| FIL70_RS24965 () | 23736..24758 | - | 1023 | WP_019053942.1 | ParB/RepB/Spo0J family partition protein | - |
| FIL70_RS24970 () | 24761..25506 | - | 746 | Protein_24 | ParA family protein | - |
| FIL70_RS24975 () | 25503..25802 | - | 300 | WP_019053944.1 | hypothetical protein | - |
| FIL70_RS24980 () | 25795..26124 | - | 330 | WP_019053945.1 | hypothetical protein | - |
| FIL70_RS24985 () | 26230..26493 | - | 264 | WP_006954203.1 | hypothetical protein | - |
| FIL70_RS24990 () | 26597..27010 | - | 414 | WP_006954205.1 | antirestriction protein | - |
| FIL70_RS24995 () | 27350..28117 | - | 768 | WP_006954207.1 | GntR family transcriptional regulator | - |
| FIL70_RS25000 () | 28296..28535 | - | 240 | WP_019053948.1 | hypothetical protein | - |
| FIL70_RS25005 () | 29049..29450 | + | 402 | WP_019053950.1 | helix-turn-helix domain-containing protein | - |
| FIL70_RS25010 () | 29557..30522 | + | 966 | WP_026149853.1 | P-type conjugative transfer ATPase TrbB | - |
| FIL70_RS25015 () | 30536..30685 | + | 150 | Protein_33 | conjugal transfer protein TrbC | - |
| FIL70_RS25020 () | 30739..33696 | - | 2958 | WP_011627729.1 | Tn3 family transposase | - |
| FIL70_RS25025 () | 33836..34429 | + | 594 | WP_013039114.1 | recombinase family protein | - |
| FIL70_RS25030 () | 34461..35288 | - | 828 | Protein_36 | hypothetical protein | - |
| FIL70_RS25035 () | 35289..35858 | - | 570 | WP_007015735.1 | recombinase family protein | - |
| FIL70_RS25040 () | 35999..38968 | + | 2970 | WP_140043562.1 | Tn3 family transposase | - |
| FIL70_RS25045 () | 39018..40385 | + | 1368 | Protein_39 | conjugal transfer protein TrbE | - |
| FIL70_RS25050 () | 40372..41091 | + | 720 | WP_006964394.1 | IncP-type conjugative transfer protein TrbF | - |
| FIL70_RS25055 () | 41109..42092 | + | 984 | WP_006964392.1 | P-type conjugative transfer protein TrbG | - |
| FIL70_RS25060 () | 42119..42868 | + | 750 | WP_158011143.1 | SPOR domain-containing protein | - |
| FIL70_RS25065 () | 42899..44248 | + | 1350 | WP_019053954.1 | hypothetical protein | - |
| FIL70_RS25070 () | 44274..45029 | + | 756 | WP_022675885.1 | P-type conjugative transfer protein TrbJ | - |
| FIL70_RS25075 () | 45039..45281 | + | 243 | WP_019053956.1 | EexN family lipoprotein | - |
| FIL70_RS25080 () | 45292..47018 | + | 1727 | Protein_46 | P-type conjugative transfer protein TrbL | - |
| FIL70_RS25085 () | 47008..48120 | + | 1113 | WP_013041568.1 | muramidase | - |
| FIL70_RS25090 () | 48141..48440 | - | 300 | WP_013041567.1 | hypothetical protein | - |
| FIL70_RS25095 () | 48433..48675 | - | 243 | WP_013041566.1 | hypothetical protein | - |
| FIL70_RS25100 () | 48675..49001 | - | 327 | WP_006964370.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| FIL70_RS25105 () | 48998..49372 | - | 375 | WP_013041565.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| FIL70_RS25935 () | 49794..49970 | + | 177 | WP_167706880.1 | hypothetical protein | - |
| FIL70_RS25110 () | 49967..50731 | - | 765 | WP_006949122.1 | IS6 family transposase | - |
| FIL70_RS25120 () | 50977..51372 | - | 396 | WP_140043564.1 | pyrimidine utilization protein C | - |
| FIL70_RS25130 () | 51519..52421 | - | 903 | WP_140043566.1 | MFS transporter | - |
| FIL70_RS25135 () | 52459..53919 | - | 1461 | WP_140043567.1 | carboxylesterase family protein | - |
| FIL70_RS25140 () | 54111..54383 | + | 273 | WP_140043568.1 | LysR family transcriptional regulator | - |
| FIL70_RS25145 () | 54377..54679 | - | 303 | WP_140043569.1 | NAD(P)H-dependent oxidoreductase | - |
| FIL70_RS25150 () | 54873..55694 | - | 822 | WP_140043570.1 | alpha/beta hydrolase | - |
| FIL70_RS25155 () | 55796..56914 | - | 1119 | WP_167706884.1 | LLM class flavin-dependent oxidoreductase | - |
| FIL70_RS25160 () | 57074..57478 | - | 405 | WP_140043572.1 | RidA family protein | - |
| FIL70_RS25165 () | 57637..58125 | - | 489 | WP_140043573.1 | flavin reductase family protein | - |
| FIL70_RS25170 () | 58205..58720 | - | 516 | WP_140043574.1 | NAD(P)H-dependent oxidoreductase | - |
| FIL70_RS25175 () | 59106..60371 | + | 1266 | Protein_64 | IS1380 family transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|