MGE detailed information
MGE type: Prophage MGE length: 52464 bp
Accession: NZ_CP041002 Location: 1317763..1370226 Organism: Escherichia coli strain FDAARGOS_772 Replicon: chromosome
Accession: NZ_CP041002 Location: 1317763..1370226 Organism: Escherichia coli strain FDAARGOS_772 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FIU16_RS06985 () | 1313670..1314869 | + | 1200 | WP_000284714.1 | lipoprotein-releasing ABC transporter permease subunit LolC | - |
| FIU16_RS06990 () | 1314862..1315563 | + | 702 | WP_001033695.1 | lipoprotein-releasing ABC transporter ATP-binding protein LolD | - |
| FIU16_RS06995 () | 1315563..1316807 | + | 1245 | WP_001251389.1 | lipoprotein-releasing ABC transporter permease subunit LolE | - |
| FIU16_RS07000 () | 1316836..1317747 | + | 912 | WP_000291270.1 | N-acetylglucosamine kinase | - |
| FIU16_RS07005 () | 1317763..1318584 | + | 822 | WP_000952736.1 | NAD-dependent protein deacylase | - |
| FIU16_RS07010 () | 1318723..1319511 | - | 789 | WP_000713472.1 | TPM domain-containing protein | - |
| FIU16_RS07015 () | 1319508..1319969 | - | 462 | WP_000076381.1 | DUF3592 domain-containing protein | - |
| FIU16_RS07020 () | 1320027..1321073 | - | 1047 | WP_000759309.1 | spermidine/putrescine ABC transporter substrate-binding protein PotD | - |
| FIU16_RS07025 () | 1321070..1321864 | - | 795 | WP_000580316.1 | spermidine/putrescine ABC transporter permease PotC | - |
| FIU16_RS07030 () | 1322031..1323149 | - | 1119 | WP_000074983.1 | phage integrase Arm DNA-binding domain-containing protein | - |
| FIU16_RS07035 () | 1323118..1323387 | - | 270 | WP_000003742.1 | excisionase | - |
| FIU16_RS07040 () | 1323449..1325887 | - | 2439 | WP_000102130.1 | exonuclease | - |
| FIU16_RS07045 () | 1325980..1326168 | - | 189 | WP_000199475.1 | DUF1482 family protein | - |
| FIU16_RS07050 () | 1326165..1326353 | - | 189 | WP_000449175.1 | cell division inhibitor | - |
| FIU16_RS07055 () | 1326848..1327114 | + | 267 | WP_012601410.1 | hypothetical protein | - |
| FIU16_RS07060 () | 1327103..1327441 | - | 339 | WP_000394541.1 | hypothetical protein | - |
| FIU16_RS07065 () | 1327453..1327605 | - | 153 | WP_000379548.1 | DUF1391 family protein | - |
| FIU16_RS07070 () | 1327875..1328165 | - | 291 | WP_014966210.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| FIU16_RS07075 () | 1328165..1328356 | - | 192 | WP_000100896.1 | hypothetical protein | Antitoxin Detail |
| FIU16_RS07080 () | 1328374..1328874 | - | 501 | WP_000824162.1 | helix-turn-helix transcriptional regulator | - |
| FIU16_RS07085 () | 1328982..1329257 | + | 276 | WP_001048458.1 | helix-turn-helix domain-containing protein | - |
| FIU16_RS07090 () | 1329241..1329666 | + | 426 | WP_000693845.1 | Rha family transcriptional regulator | - |
| FIU16_RS07095 () | 1329689..1330651 | + | 963 | WP_000095671.1 | helix-turn-helix domain-containing protein | - |
| FIU16_RS07100 () | 1330692..1331114 | + | 423 | WP_000416574.1 | DUF977 family protein | - |
| FIU16_RS07105 () | 1331111..1331605 | + | 495 | WP_001275731.1 | class I SAM-dependent methyltransferase | - |
| FIU16_RS07110 () | 1331592..1332278 | + | 687 | WP_000034251.1 | ead/Ea22-like family protein | - |
| FIU16_RS07115 () | 1332275..1333024 | + | 750 | WP_001289900.1 | ead/Ea22-like family protein | - |
| FIU16_RS07120 () | 1333026..1333204 | + | 179 | Protein_1267 | hypothetical protein | - |
| FIU16_RS07130 () | 1333538..1333813 | + | 276 | Protein_1268 | hypothetical protein | - |
| FIU16_RS07135 () | 1333947..1334210 | + | 264 | WP_000224227.1 | hypothetical protein | - |
| FIU16_RS27265 () | 1334221..1334364 | + | 144 | WP_000207966.1 | hypothetical protein | - |
| FIU16_RS07140 () | 1334342..1334698 | + | 357 | WP_000403778.1 | hypothetical protein | - |
| FIU16_RS07145 () | 1334792..1334974 | + | 183 | WP_001224662.1 | hypothetical protein | - |
| FIU16_RS27270 () | 1334967..1335143 | + | 177 | WP_000753058.1 | hypothetical protein | - |
| FIU16_RS27275 () | 1335140..1335456 | + | 317 | Protein_1274 | hypothetical protein | - |
| FIU16_RS07165 () | 1336065..1336220 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| FIU16_RS07175 () | 1336388..1336666 | + | 279 | WP_001341382.1 | hypothetical protein | - |
| FIU16_RS07180 () | 1336668..1337717 | + | 1050 | WP_001265094.1 | DUF968 domain-containing protein | - |
| FIU16_RS07185 () | 1337730..1338104 | + | 375 | WP_000904113.1 | RusA family crossover junction endodeoxyribonuclease | - |
| FIU16_RS07190 () | 1338101..1338922 | + | 822 | WP_000762898.1 | antitermination protein | - |
| FIU16_RS07195 () | 1339149..1339346 | + | 198 | WP_000917749.1 | hypothetical protein | - |
| FIU16_RS07200 () | 1339497..1340546 | + | 1050 | WP_000935531.1 | site-specific DNA-methyltransferase | - |
| FIU16_RS07220 () | 1341336..1343189 | + | 1854 | WP_021519714.1 | SASA family carbohydrate esterase | - |
| FIU16_RS07225 () | 1343340..1343555 | + | 216 | WP_000284510.1 | class II holin family protein | - |
| FIU16_RS07230 () | 1343560..1344366 | + | 807 | WP_000731195.1 | YdfR family protein | - |
| FIU16_RS07235 () | 1344409..1344942 | + | 534 | WP_001092864.1 | lysozyme | - |
| FIU16_RS07245 () | 1345241..1345708 | + | 468 | WP_001082546.1 | lysis protein | - |
| FIU16_RS07250 () | 1346059..1346199 | + | 141 | WP_000347013.1 | hypothetical protein | - |
| FIU16_RS07255 () | 1346332..1346517 | - | 186 | WP_001329960.1 | YlcI/YnfO family protein | - |
| FIU16_RS07265 () | 1346919..1347428 | + | 510 | WP_000235436.1 | terminase small subunit | - |
| FIU16_RS07270 () | 1347400..1349328 | + | 1929 | WP_001402639.1 | phage terminase large subunit family protein | - |
| FIU16_RS07275 () | 1349312..1349518 | + | 207 | WP_000259002.1 | head-tail joining protein | - |
| FIU16_RS07280 () | 1349515..1351107 | + | 1593 | WP_012601424.1 | phage portal protein | - |
| FIU16_RS07285 () | 1351097..1352602 | + | 1506 | WP_001254006.1 | S49 family peptidase | - |
| FIU16_RS07290 () | 1352639..1352986 | + | 348 | WP_000256795.1 | head decoration protein | - |
| FIU16_RS07295 () | 1353044..1354072 | + | 1029 | WP_000522644.1 | major capsid protein | - |
| FIU16_RS07300 () | 1354125..1354493 | + | 369 | WP_001390684.1 | hypothetical protein | - |
| FIU16_RS07305 () | 1354486..1354839 | + | 354 | WP_001204567.1 | tail attachment protein | - |
| FIU16_RS07310 () | 1354855..1355430 | + | 576 | WP_000975003.1 | phage tail protein | - |
| FIU16_RS07315 () | 1355427..1355822 | + | 396 | WP_000683079.1 | phage minor tail U family protein | - |
| FIU16_RS07320 () | 1355830..1356582 | + | 753 | WP_000235035.1 | phage tail protein | - |
| FIU16_RS07325 () | 1356596..1357018 | + | 423 | WP_000479049.1 | phage minor tail protein G | - |
| FIU16_RS07330 () | 1357045..1357458 | + | 414 | WP_000533440.1 | phage tail assembly protein T | - |
| FIU16_RS07335 () | 1357439..1360051 | + | 2613 | WP_000081807.1 | phage tail tape measure protein | - |
| FIU16_RS07340 () | 1360048..1360377 | + | 330 | WP_000847306.1 | phage tail protein | - |
| FIU16_RS07345 () | 1360377..1361075 | + | 699 | WP_001335877.1 | phage minor tail protein L | - |
| FIU16_RS07350 () | 1361086..1361829 | + | 744 | WP_000194711.1 | C40 family peptidase | - |
| FIU16_RS07355 () | 1361775..1362407 | + | 633 | WP_123001620.1 | tail assembly protein | - |
| FIU16_RS07360 () | 1362648..1366121 | + | 3474 | WP_000515046.1 | host specificity protein J | - |
| FIU16_RS07365 () | 1366189..1366788 | + | 600 | WP_001233150.1 | Ail/Lom family outer membrane beta-barrel protein | - |
| FIU16_RS07370 () | 1366853..1369645 | + | 2793 | WP_000279201.1 | prophage tail fiber N-terminal domain-containing protein | - |
| FIU16_RS07375 () | 1369645..1370226 | + | 582 | WP_000885609.1 | tail fiber assembly protein | - |
| FIU16_RS07380 () | 1370458..1371321 | - | 864 | WP_000799406.1 | spermidine/putrescine ABC transporter permease PotB | - |
| FIU16_RS07385 () | 1371305..1372441 | - | 1137 | WP_000531594.1 | spermidine/putrescine ABC transporter ATP-binding protein PotA | - |
| FIU16_RS07390 () | 1372691..1373920 | + | 1230 | WP_000359463.1 | peptidase T | - |
| FIU16_RS07395 () | 1374066..1375187 | - | 1122 | WP_001295435.1 | [50S ribosomal protein L16]-arginine 3-hydroxylase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|