MGE detailed information
MGE type: Prophage MGE length: 19439 bp
Accession: NZ_CP040927 Location: 744985..764423 Organism: Escherichia coli strain YY76-1 Replicon: chromosome
Accession: NZ_CP040927 Location: 744985..764423 Organism: Escherichia coli strain YY76-1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FH040_RS03580 () | 740518..742221 | + | 1704 | WP_000083065.1 | hydrogenase 2 large subunit | - |
| FH040_RS03585 () | 742221..742715 | + | 495 | WP_113402252.1 | HyaD/HybD family hydrogenase maturation endopeptidase | - |
| FH040_RS03590 () | 742708..743196 | + | 489 | WP_000134014.1 | hydrogenase-2 assembly chaperone | - |
| FH040_RS03595 () | 743189..743530 | + | 342 | WP_000544953.1 | hydrogenase maturation nickel metallochaperone HypA | - |
| FH040_RS03600 () | 743543..743791 | + | 249 | WP_000334896.1 | hydrogenase maturation factor HybG | - |
| FH040_RS03605 () | 743914..744780 | - | 867 | WP_001295515.1 | glutathione-dependent disulfide-bond oxidoreductase | - |
| FH040_RS03610 () | 744985..746844 | + | 1860 | WP_001297309.1 | bifunctional glutathionylspermidine amidase/synthase | - |
| FH040_RS03615 () | 746954..747651 | + | 698 | Protein_708 | IS1 family transposase IS1R | Transposase |
| FH040_RS03620 () | 747667..748239 | + | 573 | Protein_709 | Recombination protein RecR | VF |
| FH040_RS23615 () | 748261..748638 | + | 378 | WP_002431284.1 | hypothetical protein | VF |
| FH040_RS23620 () | 748650..749009 | + | 360 | WP_001338796.1 | Antitoxin DinJ | VF |
| FH040_RS03630 () | 749011..750075 | + | 1065 | WP_001269817.1 | fimbrial protein | - |
| FH040_RS03635 () | 750118..750318 | - | 201 | WP_000350095.1 | cell surface composition regulator GlgS | - |
| FH040_RS03640 () | 750587..751180 | + | 594 | WP_000599943.1 | DUF1449 family protein | - |
| FH040_RS03645 () | 751214..751911 | + | 698 | Protein_715 | IS1 family transposase IS1R | Transposase |
| FH040_RS03650 () | 752075..753940 | - | 1866 | WP_063078134.1 | DUF262 domain-containing protein | - |
| FH040_RS03655 () | 754315..755543 | + | 1229 | WP_165369376.1 | IS3 family transposase IS2 | Transposase |
| FH040_RS03660 () | 755682..756230 | + | 549 | WP_096263603.1 | fimbrial protein YehD | - |
| FH040_RS03665 () | 756286..756966 | + | 681 | WP_053270475.1 | 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD | VF |
| FH040_RS03670 () | 756984..759470 | + | 2487 | WP_148245867.1 | Modulator of FtsH protease YccA | VF |
| FH040_RS03675 () | 759482..760501 | + | 1020 | WP_095784823.1 | type 1 fimbrial protein | - |
| FH040_RS03680 () | 760686..760907 | + | 222 | WP_001603498.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| FH040_RS03685 () | 760907..761284 | + | 378 | WP_053291281.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| FH040_RS03695 () | 761394..761609 | - | 216 | Protein_724 | IS3 family transposase IS911 | Transposase |
| FH040_RS03700 () | 761795..763057 | - | 1263 | WP_113402210.1 | hypothetical protein ; Integrase | Integrase |
| FH040_RS03710 () | 763436..763669 | - | 234 | Protein_726 | DUF554 family protein | - |
| FH040_RS03715 () | 763726..764423 | + | 698 | Protein_727 | IS1 family transposase | - |
| FH040_RS03720 () | 764441..764920 | - | 480 | Protein_728 | DUF554 family protein | - |
| FH040_RS23840 () | 765073..765156 | + | 84 | WP_211180506.1 | protein YqgH | - |
| FH040_RS03725 () | 765318..767453 | + | 2136 | WP_000839760.1 | ornithine decarboxylase | - |
| FH040_RS03730 () | 767503..768759 | - | 1257 | WP_001299430.1 | nucleoside permease NupG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|