MGE detailed information
MGE type: Prophage MGE length: 33405 bp
Accession: NZ_CP040919 Location: 3815106..3848510 Organism: Escherichia coli strain FC853_EC Replicon: chromosome
Accession: NZ_CP040919 Location: 3815106..3848510 Organism: Escherichia coli strain FC853_EC Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FH485_RS18750 () | 3810644..3810973 | + | 330 | WP_001303809.1 | YkgJ family cysteine cluster protein | - |
| FH485_RS18760 () | 3811223..3811837 | - | 615 | WP_001019920.1 | YagU family protein | - |
| FH485_RS18770 () | 3812652..3813011 | + | 360 | WP_001350215.1 | hypothetical protein | - |
| FH485_RS18775 () | 3813004..3813546 | - | 543 | WP_025693443.1 | plasmid pRiA4b ORF-3 family protein | - |
| FH485_RS18785 () | 3814150..3814431 | - | 282 | WP_000617443.1 | PerC family transcriptional regulator | - |
| FH485_RS18800 () | 3815106..3815291 | + | 186 | WP_001236873.1 | AlpA family phage regulatory protein | - |
| FH485_RS18810 () | 3816286..3816723 | + | 438 | WP_016231257.1 | hypothetical protein | - |
| FH485_RS18815 () | 3816785..3818890 | - | 2106 | WP_025693498.1 | hypothetical protein | - |
| FH485_RS18820 () | 3818890..3820311 | - | 1422 | WP_025693499.1 | phage DNA ejection protein | - |
| FH485_RS18825 () | 3820311..3820988 | - | 678 | WP_000909175.1 | hypothetical protein | - |
| FH485_RS18830 () | 3820982..3821443 | - | 462 | WP_000420674.1 | DUF2824 family protein | - |
| FH485_RS27940 () | 3821460..3821621 | - | 162 | WP_001018524.1 | hypothetical protein | - |
| FH485_RS18840 () | 3822206..3824962 | - | 2757 | WP_001585368.1 | TOPRIM and DUF927 domain-containing protein | - |
| FH485_RS18845 () | 3824949..3825320 | - | 372 | WP_001208878.1 | hypothetical protein | - |
| FH485_RS18850 () | 3825313..3825654 | - | 342 | WP_000628967.1 | hypothetical protein | - |
| FH485_RS18855 () | 3825665..3826267 | - | 603 | WP_001058748.1 | hypothetical protein | - |
| FH485_RS18860 () | 3826260..3826481 | - | 222 | WP_000181940.1 | hypothetical protein | - |
| FH485_RS18865 () | 3826478..3826741 | - | 264 | WP_001024675.1 | hypothetical protein | - |
| FH485_RS18870 () | 3826738..3826932 | - | 195 | WP_001065738.1 | hypothetical protein | - |
| FH485_RS18875 () | 3826925..3827992 | - | 1068 | WP_025693500.1 | ash family protein | - |
| FH485_RS18880 () | 3827986..3828168 | - | 183 | WP_000476150.1 | DUF4222 domain-containing protein | - |
| FH485_RS18885 () | 3828161..3828994 | - | 834 | WP_140028029.1 | antA/AntB antirepressor family protein | - |
| FH485_RS18890 () | 3829007..3829438 | - | 432 | WP_000412531.1 | hypothetical protein | - |
| FH485_RS18895 () | 3829438..3829641 | - | 204 | WP_000035054.1 | AlpA family transcriptional regulator | - |
| FH485_RS18905 () | 3830069..3831283 | - | 1215 | WP_000772643.1 | putative transport protein HsrA ; Integrase | Integrase |
| FH485_RS18920 () | 3831639..3832892 | - | 1254 | WP_022645230.1 | glutamate-5-semialdehyde dehydrogenase | - |
| FH485_RS18925 () | 3832904..3834007 | - | 1104 | WP_022645229.1 | glutamate 5-kinase | - |
| FH485_RS18930 () | 3834295..3835350 | + | 1056 | WP_022645228.1 | phosphoporin PhoE | - |
| FH485_RS18935 () | 3835389..3835790 | - | 402 | WP_000174682.1 | sigma factor-binding protein Crl | - |
| FH485_RS18940 () | 3835848..3837092 | - | 1245 | WP_000189541.1 | esterase FrsA | - |
| - () | 3836508..3836588 | - | 81 | NuclAT_9 | - | - |
| - () | 3836508..3836588 | - | 81 | NuclAT_9 | - | - |
| - () | 3836508..3836588 | - | 81 | NuclAT_9 | - | - |
| - () | 3836508..3836588 | - | 81 | NuclAT_9 | - | - |
| FH485_RS18945 () | 3837184..3837642 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| FH485_RS18950 () | 3837903..3839360 | + | 1458 | WP_022645227.1 | cytosol nonspecific dipeptidase | - |
| FH485_RS18955 () | 3839369..3839650 | + | 282 | WP_022645226.1 | hypothetical protein | - |
| FH485_RS18960 () | 3839667..3840176 | - | 510 | WP_001361775.1 | hydrolase | - |
| FH485_RS18965 () | 3840238..3840852 | - | 615 | WP_022645225.1 | peptide chain release factor H | - |
| FH485_RS18970 () | 3840849..3841988 | - | 1140 | WP_022645224.1 | RNA ligase RtcB family protein | - |
| FH485_RS18975 () | 3842179..3842631 | - | 453 | WP_023909048.1 | GNAT family N-acetyltransferase | - |
| FH485_RS18980 () | 3842641..3843039 | - | 399 | WP_001263491.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| FH485_RS18985 () | 3843042..3843335 | - | 294 | WP_000554755.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| FH485_RS18990 () | 3843387..3844442 | - | 1056 | WP_022645222.1 | DNA polymerase IV | - |
| FH485_RS18995 () | 3844513..3845298 | - | 786 | WP_072224360.1 | ATP-dependent DNA helicase Rep | VF |
| FH485_RS19000 () | 3845243..3846981 | + | 1739 | Protein_3647 | Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase | VF |
| FH485_RS19005 () | 3847079..3847852 | - | 774 | WP_022645219.1 | Thioredoxin 1 | VF |
| FH485_RS19010 () | 3848038..3848298 | + | 261 | WP_000729708.1 | type II toxin-antitoxin system antitoxin DinJ | - |
| FH485_RS19015 () | 3848301..3848578 | + | 278 | Protein_3650 | type II toxin-antitoxin system mRNA interferase toxin YafQ | - |
| FH485_RS19020 () | 3848734..3849474 | + | 741 | WP_001225679.1 | murein L,D-transpeptidase | - |
| FH485_RS19025 () | 3849445..3850212 | - | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| FH485_RS19030 () | 3850328..3850906 | - | 579 | WP_001570958.1 | D-sedoheptulose 7-phosphate isomerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|