MGE detailed information
MGE type: Prophage MGE length: 37938 bp
Accession: NZ_CP040815 Location: 4079154..4117091 Organism: Dickeya zeae strain A5272 Replicon: chromosome
Accession: NZ_CP040815 Location: 4079154..4117091 Organism: Dickeya zeae strain A5272 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FGI00_RS17925 (FGI00_18130) | 4075276..4075728 | - | 453 | WP_026357807.1 | ribosome maturation factor RimP | - |
| FGI00_RS17940 (FGI00_18145) | 4076223..4076558 | - | 336 | WP_012883338.1 | preprotein translocase subunit SecG | - |
| FGI00_RS17945 (FGI00_18150) | 4076861..4078198 | - | 1338 | WP_038903303.1 | phosphoglucosamine mutase | - |
| FGI00_RS17950 (FGI00_18155) | 4078207..4079040 | - | 834 | WP_248588394.1 | dihydropteroate synthase | - |
| FGI00_RS17955 (FGI00_18160) | 4079154..4081106 | - | 1953 | WP_248588395.1 | ATP-dependent zinc metalloprotease FtsH | - |
| FGI00_RS17960 (FGI00_18165) | 4081154..4081783 | - | 630 | WP_012883334.1 | 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE | - |
| FGI00_RS17965 (FGI00_18170) | 4081942..4082235 | + | 294 | WP_012771131.1 | ribosome assembly RNA-binding protein YhbY | - |
| FGI00_RS17970 (FGI00_18175) | 4082361..4082837 | - | 477 | WP_019843796.1 | transcription elongation factor GreA | - |
| FGI00_RS17975 (FGI00_18180) | 4083103..4084536 | + | 1434 | WP_248588396.1 | serine-type D-Ala-D-Ala carboxypeptidase | - |
| FGI00_RS17980 (FGI00_18185) | 4084635..4085810 | - | 1176 | WP_016943774.1 | Obg family GTPase CgtA | - |
| FGI00_RS17985 (FGI00_18190) | 4086067..4087011 | - | 945 | WP_248588397.1 | DMT family transporter | - |
| FGI00_RS17990 (FGI00_18195) | 4087129..4087386 | - | 258 | WP_012771136.1 | 50S ribosomal protein L27 | - |
| FGI00_RS17995 (FGI00_18200) | 4087406..4087717 | - | 312 | WP_016943772.1 | 50S ribosomal protein L21 | - |
| FGI00_RS18000 (FGI00_18205) | 4087977..4088948 | + | 972 | WP_016943771.1 | octaprenyl diphosphate synthase | - |
| FGI00_RS18005 (FGI00_18210) | 4088950..4089372 | - | 423 | WP_248588398.1 | DNA-binding protein | - |
| FGI00_RS18010 (FGI00_18215) | 4089608..4089994 | - | 387 | WP_016943770.1 | DNA-binding protein | - |
| FGI00_RS18015 (FGI00_18220) | 4090183..4090464 | + | 282 | WP_019843790.1 | helix-turn-helix transcriptional regulator | - |
| FGI00_RS18020 (FGI00_18225) | 4090537..4091478 | - | 942 | WP_016943768.1 | malate dehydrogenase | - |
| FGI00_RS18025 (FGI00_18230) | 4091970..4092440 | + | 471 | WP_016943767.1 | transcriptional regulator ArgR | - |
| FGI00_RS18030 (FGI00_18235) | 4092494..4093507 | - | 1014 | WP_248589834.1 | tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD | - |
| FGI00_RS18035 (FGI00_18240) | 4093737..4093952 | + | 216 | WP_001144069.1 | 30S ribosomal protein S21 | - |
| FGI00_RS18040 (FGI00_18245) | 4094081..4095835 | + | 1755 | WP_168364913.1 | DNA primase | - |
| FGI00_RS18045 (FGI00_18250) | 4095992..4097827 | + | 1836 | WP_016943764.1 | RNA polymerase sigma factor RpoD | - |
| FGI00_RS18055 (FGI00_18260) | 4098319..4098660 | - | 342 | WP_121575864.1 | TA system toxin CbtA family protein | Toxin Detail |
| FGI00_RS18060 (FGI00_18265) | 4098681..4099022 | - | 342 | WP_186957569.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| FGI00_RS18065 (FGI00_18270) | 4099033..4099563 | - | 531 | WP_248588399.1 | DNA repair protein RadC | - |
| FGI00_RS18070 (FGI00_18275) | 4099576..4100019 | - | 444 | WP_248588400.1 | antirestriction protein | - |
| FGI00_RS18075 (FGI00_18280) | 4100050..4100871 | - | 822 | WP_248588401.1 | DUF932 domain-containing protein | - |
| FGI00_RS18080 (FGI00_18285) | 4100970..4101200 | - | 231 | WP_119834391.1 | DUF905 domain-containing protein | - |
| FGI00_RS18085 (FGI00_18290) | 4101272..4101721 | - | 450 | WP_071199563.1 | IrmA family protein | - |
| FGI00_RS18090 (FGI00_18295) | 4101718..4102170 | - | 453 | WP_100168667.1 | hypothetical protein | - |
| FGI00_RS18095 (FGI00_18300) | 4102185..4102678 | - | 494 | Protein_3531 | hypothetical protein | - |
| FGI00_RS18100 (FGI00_18305) | 4102691..4103811 | + | 1121 | WP_248587941.1 | IS3 family transposase ISRaq1 | Transposase |
| FGI00_RS18105 (FGI00_18310) | 4104266..4108324 | - | 4059 | WP_248588402.1 | hypothetical protein | - |
| FGI00_RS18110 (FGI00_18315) | 4108339..4108638 | - | 300 | WP_248589835.1 | DUF6375 family protein | - |
| FGI00_RS18120 (FGI00_18325) | 4109828..4110103 | + | 276 | WP_248588403.1 | hypothetical protein | - |
| FGI00_RS18125 (FGI00_18330) | 4110144..4110770 | - | 627 | WP_248588404.1 | inovirus Gp2 family protein | - |
| FGI00_RS18130 (FGI00_18335) | 4111087..4112499 | - | 1413 | WP_248588405.1 | YfjI family protein | - |
| FGI00_RS18135 (FGI00_18340) | 4112631..4112867 | - | 237 | WP_248588406.1 | AlpA family phage regulatory protein | - |
| FGI00_RS18140 (FGI00_18345) | 4113157..4113942 | - | 786 | WP_248588407.1 | hypothetical protein | - |
| FGI00_RS18145 (FGI00_18350) | 4114094..4114240 | + | 147 | WP_248588408.1 | hypothetical protein | - |
| FGI00_RS18150 (FGI00_18360) | 4114597..4114998 | - | 402 | WP_248588409.1 | hypothetical protein | - |
| FGI00_RS18155 (FGI00_18365) | 4115055..4115621 | - | 567 | WP_248588410.1 | hypothetical protein | - |
| FGI00_RS18160 (FGI00_18370) | 4115775..4117091 | - | 1317 | WP_248588411.1 | Prophage integrase IntA ; Integrase | Integrase |
| FGI00_RS18165 (FGI00_18375) | 4118614..4119243 | + | 630 | WP_248588412.1 | hypothetical protein | - |
| FGI00_RS18170 (FGI00_18380) | 4119469..4120128 | + | 660 | WP_248588413.1 | hypothetical protein | - |
| FGI00_RS18175 (FGI00_18385) | 4120291..4120674 | + | 384 | WP_248588414.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|