MGE detailed information
MGE type: Genomic_island MGE length: 43781 bp
Accession: NZ_CP040815 Location: 3078660..3122440 Organism: Dickeya zeae strain A5272 Replicon: chromosome
Accession: NZ_CP040815 Location: 3078660..3122440 Organism: Dickeya zeae strain A5272 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FGI00_RS13720 (FGI00_13890) | 3075990..3077273 | + | 1284 | WP_248587924.1 | integrase arm-type DNA-binding domain-containing protein | - |
| FGI00_RS13725 (FGI00_13895) | 3077343..3077654 | - | 312 | WP_248587925.1 | DUF736 family protein | - |
| FGI00_RS13730 (FGI00_13900) | 3078660..3079586 | + | 927 | WP_248587926.1 | hypothetical protein | - |
| FGI00_RS13735 (FGI00_13905) | 3079885..3080151 | - | 267 | WP_248587927.1 | type VI secretion system PAAR protein | - |
| FGI00_RS13740 (FGI00_13910) | 3080177..3081196 | - | 1020 | WP_248587928.1 | hypothetical protein | - |
| FGI00_RS13745 (FGI00_13915) | 3081319..3082341 | - | 1023 | WP_248587929.1 | hypothetical protein | - |
| FGI00_RS13750 (FGI00_13920) | 3082356..3083900 | - | 1545 | WP_248587930.1 | hypothetical protein | - |
| FGI00_RS13755 (FGI00_13925) | 3083912..3084742 | - | 831 | WP_248587931.1 | DUF4123 domain-containing protein | - |
| FGI00_RS13760 (FGI00_13930) | 3084739..3086700 | - | 1962 | WP_248587932.1 | Actin cross-linking toxin VgrG1 | VF |
| FGI00_RS13765 (FGI00_13935) | 3086813..3087331 | - | 519 | WP_220177602.1 | Major exported protein | VF |
| FGI00_RS13770 (FGI00_13940) | 3088288..3088533 | + | 246 | WP_012769232.1 | helix-turn-helix transcriptional regulator | - |
| FGI00_RS13775 (FGI00_13945) | 3088870..3089139 | - | 270 | WP_024108925.1 | helix-turn-helix transcriptional regulator | - |
| FGI00_RS13780 (FGI00_13950) | 3089273..3089551 | + | 279 | WP_226055416.1 | HTH-type transcriptional regulator Xre | VF |
| FGI00_RS13785 (FGI00_13955) | 3089665..3089922 | + | 258 | WP_016940998.1 | helix-turn-helix transcriptional regulator | - |
| FGI00_RS13790 | 3089939..3090112 | - | 174 | WP_248587933.1 | hypothetical protein | - |
| FGI00_RS13795 (FGI00_13960) | 3090420..3090614 | + | 195 | WP_027712544.1 | AlpA family transcriptional regulator | - |
| FGI00_RS13800 (FGI00_13965) | 3090631..3091215 | + | 585 | Protein_2692 | DUF2857 domain-containing protein | - |
| FGI00_RS13805 (FGI00_13970) | 3091205..3091414 | + | 210 | WP_248587934.1 | TraR/DksA family transcriptional regulator | - |
| FGI00_RS13810 (FGI00_13975) | 3091841..3093079 | + | 1239 | WP_248587935.1 | IS110 family transposase ISCps4 | Transposase |
| FGI00_RS13815 (FGI00_13980) | 3093128..3094954 | - | 1827 | WP_248587936.1 | hypothetical protein | - |
| FGI00_RS13820 (FGI00_13985) | 3095521..3096150 | - | 630 | WP_248587937.1 | hypothetical protein | - |
| FGI00_RS13825 | 3096548..3096634 | + | 87 | Protein_2697 | mobilization protein mobC | - |
| FGI00_RS13830 (FGI00_13995) | 3096748..3097062 | - | 315 | WP_248587938.1 | CcdB family protein | Toxin Detail |
| FGI00_RS13835 (FGI00_14000) | 3097065..3097301 | - | 237 | WP_038925990.1 | type II toxin-antitoxin system CcdA family antitoxin | Antitoxin Detail |
| FGI00_RS13840 (FGI00_14005) | 3097622..3097939 | - | 318 | Protein_2700 | zincin-like metallopeptidase domain-containing protein | - |
| FGI00_RS13845 (FGI00_14010) | 3098023..3099345 | + | 1323 | WP_248587601.1 | IS4 family transposase IS1271 | Transposase |
| FGI00_RS13850 (FGI00_14015) | 3099356..3099997 | - | 642 | Protein_2702 | ArdC-like ssDNA-binding domain-containing protein | - |
| FGI00_RS13855 (FGI00_14020) | 3100636..3101862 | - | 1227 | WP_248587939.1 | hypothetical protein | - |
| FGI00_RS13860 (FGI00_14025) | 3101901..3103178 | - | 1278 | WP_248587940.1 | hypothetical protein | - |
| FGI00_RS13870 (FGI00_14035) | 3104575..3105249 | - | 675 | WP_248587942.1 | hypothetical protein | - |
| FGI00_RS13875 (FGI00_14040) | 3105322..3106442 | + | 1121 | WP_248587941.1 | IS3 family transposase ISRaq1 | Transposase |
| FGI00_RS13880 (FGI00_14045) | 3107030..3109696 | + | 2667 | WP_248587943.1 | AAA family ATPase | - |
| FGI00_RS13885 (FGI00_14050) | 3109809..3113729 | + | 3921 | WP_248587944.1 | hypothetical protein | - |
| FGI00_RS13890 (FGI00_14055) | 3113848..3114048 | + | 201 | WP_248587945.1 | hypothetical protein | - |
| FGI00_RS13895 (FGI00_14060) | 3114262..3114387 | + | 126 | Protein_2711 | IS3 family transposase | - |
| FGI00_RS13900 (FGI00_14065) | 3114423..3115187 | - | 765 | WP_248589808.1 | DNA-binding transcriptional regulator YciT | - |
| FGI00_RS13905 (FGI00_14070) | 3115313..3116575 | - | 1263 | WP_248587946.1 | DUF1479 family protein | - |
| FGI00_RS13910 (FGI00_14075) | 3117644..3118306 | - | 663 | WP_248587947.1 | fructose-6-phosphate aldolase | - |
| FGI00_RS13915 (FGI00_14080) | 3118445..3119344 | + | 900 | WP_248587948.1 | glycyl-radical enzyme activating protein | - |
| FGI00_RS13920 (FGI00_14085) | 3119349..3121781 | + | 2433 | WP_248587949.1 | formate C-acetyltransferase/glycerol dehydratase family glycyl radical enzyme | - |
| FGI00_RS13925 (FGI00_14090) | 3121811..3122581 | - | 771 | WP_248587950.1 | LysR family substrate-binding domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|