MGE detailed information
MGE type: Prophage MGE length: 46769 bp
Accession: NZ_CP040799 Location: 1554284..1601052 Organism: Xylella fastidiosa subsp. fastidiosa strain Bakersfield-1 Replicon: chromosome
Accession: NZ_CP040799 Location: 1554284..1601052 Organism: Xylella fastidiosa subsp. fastidiosa strain Bakersfield-1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FG899_RS07100 () | 1550573..1551283 | + | 711 | WP_004088272.1 | epoxyqueuosine reductase QueH | - |
| FG899_RS07105 () | 1551317..1551943 | + | 627 | WP_004088271.1 | nicotinamidase | - |
| FG899_RS07110 () | 1552018..1553664 | - | 1647 | WP_004088270.1 | AMP-binding protein | - |
| FG899_RS07115 () | 1553958..1554266 | - | 309 | WP_012382664.1 | lipid-A-disaccharide synthase N-terminal domain-containing protein | - |
| FG899_RS07120 () | 1554284..1555006 | - | 723 | WP_004088269.1 | glycosyltransferase | - |
| FG899_RS07125 () | 1555045..1556016 | - | 972 | WP_004088268.1 | UDP-N-acetylglucosamine 4-epimerase | VF |
| FG899_RS07130 () | 1556323..1557255 | - | 933 | WP_004088267.1 | ParB/RepB/Spo0J family partition protein | - |
| FG899_RS07135 () | 1557255..1558049 | - | 795 | WP_004088266.1 | Sporulation initiation inhibitor protein Soj | VF |
| FG899_RS07140 () | 1558348..1559301 | - | 954 | WP_011098046.1 | MBL fold metallo-hydrolase | - |
| FG899_RS07145 () | 1560102..1561382 | - | 1281 | WP_004088264.1 | serine--tRNA ligase | - |
| FG899_RS07150 () | 1561504..1562199 | + | 696 | WP_004088263.1 | energy transducer TonB | - |
| FG899_RS07155 () | 1562476..1563517 | - | 1042 | Protein_1364 | hypothetical protein ; Integrase | Integrase |
| FG899_RS07160 () | 1563529..1563838 | - | 310 | Protein_1365 | DUF4224 domain-containing protein | - |
| FG899_RS07165 () | 1563835..1564150 | - | 316 | Protein_1366 | hypothetical protein | - |
| FG899_RS07170 () | 1564073..1565134 | + | 1062 | Protein_1367 | DNA polymerase | - |
| FG899_RS07175 () | 1565133..1565519 | - | 387 | Protein_1368 | lysozyme | - |
| FG899_RS07180 () | 1565620..1566351 | - | 732 | WP_004089563.1 | site-specific DNA-methyltransferase | - |
| FG899_RS07185 () | 1566596..1566751 | - | 156 | WP_155115072.1 | hypothetical protein | - |
| FG899_RS07190 () | 1567040..1568905 | + | 1866 | WP_004089558.1 | excinuclease ABC subunit UvrC | - |
| FG899_RS07195 () | 1568902..1569531 | + | 630 | WP_004089556.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
| FG899_RS07205 () | 1570282..1570740 | - | 459 | WP_011098051.1 | hypothetical protein | - |
| FG899_RS07210 () | 1570949..1571446 | - | 498 | WP_011098052.1 | hypothetical protein | - |
| FG899_RS07215 () | 1572051..1573055 | + | 1005 | WP_004089540.1 | porphobilinogen synthase | - |
| FG899_RS07220 () | 1573619..1574002 | - | 384 | WP_004089538.1 | VOC family protein | - |
| FG899_RS07225 () | 1574153..1574530 | - | 378 | WP_004089535.1 | DUF2913 family protein | - |
| FG899_RS07230 () | 1574530..1575233 | + | 704 | Protein_1378 | IS6 family transposase ISEas1 | Transposase |
| FG899_RS07235 () | 1575365..1576699 | + | 1335 | WP_004089531.1 | glutamate-1-semialdehyde 2,1-aminomutase | - |
| FG899_RS07240 () | 1576795..1577649 | - | 855 | WP_011098055.1 | iron-sulfur cluster carrier protein ApbC | - |
| FG899_RS07245 () | 1578141..1578914 | + | 774 | WP_004089528.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | VF |
| FG899_RS07250 () | 1578911..1579375 | + | 465 | WP_011098056.1 | Low molecular weight protein-tyrosine-phosphatase YfkJ | VF |
| FG899_RS07255 () | 1579362..1580075 | - | 714 | WP_011098057.1 | site-specific DNA-methyltransferase | - |
| FG899_RS07260 () | 1580426..1580707 | + | 282 | WP_011098058.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| FG899_RS07265 () | 1580717..1581016 | + | 300 | WP_004089519.1 | HigA family addiction module antidote protein | - |
| FG899_RS07270 () | 1581196..1581531 | - | 336 | WP_004085025.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| FG899_RS07275 () | 1581528..1581782 | - | 255 | WP_004089517.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| FG899_RS07280 () | 1581835..1582533 | - | 699 | WP_011098059.1 | hypothetical protein | - |
| FG899_RS07285 () | 1582662..1583123 | - | 462 | WP_011098060.1 | hypothetical protein | - |
| FG899_RS07290 () | 1583120..1583884 | - | 765 | WP_004090689.1 | hypothetical protein | - |
| FG899_RS07295 () | 1583790..1584896 | - | 1107 | WP_012382665.1 | YdaU family protein | - |
| FG899_RS07300 () | 1584893..1585192 | - | 300 | WP_080513037.1 | hypothetical protein | - |
| FG899_RS07305 () | 1585191..1585668 | + | 478 | Protein_1393 | conjugal transfer protein | - |
| FG899_RS07310 () | 1585674..1586279 | + | 606 | WP_004091108.1 | hypothetical protein | VF |
| FG899_RS07315 () | 1586368..1586727 | + | 360 | Protein_1395 | hypothetical protein | - |
| FG899_RS07320 () | 1586817..1587264 | + | 448 | Protein_1396 | baseplate J/gp47 family protein | - |
| FG899_RS07325 () | 1587266..1587943 | + | 678 | WP_004091097.1 | hypothetical protein | - |
| FG899_RS07330 () | 1587862..1588373 | + | 512 | Protein_1398 | hypothetical protein | - |
| FG899_RS07335 () | 1588615..1588875 | + | 261 | WP_014607365.1 | hypothetical protein | - |
| FG899_RS07345 () | 1589390..1589629 | - | 240 | WP_004091081.1 | hypothetical protein | - |
| FG899_RS07350 () | 1590478..1591806 | - | 1329 | WP_004091079.1 | 3-phosphoshikimate 1-carboxyvinyltransferase | - |
| FG899_RS07355 () | 1591895..1593019 | - | 1125 | WP_004091077.1 | prephenate dehydratase | - |
| FG899_RS07360 () | 1593099..1594187 | - | 1089 | WP_011098070.1 | phosphoserine transaminase | - |
| FG899_RS07365 () | 1594849..1595964 | + | 1116 | WP_012382668.1 | energy transducer TonB | - |
| FG899_RS07370 () | 1595991..1597175 | - | 1185 | WP_011098072.1 | ABC transporter permease | - |
| FG899_RS07375 () | 1597172..1597918 | - | 747 | WP_004091068.1 | ABC transporter ATP-binding protein NatA | VF |
| FG899_RS07380 () | 1597915..1599450 | - | 1536 | WP_004091066.1 | alpha/beta hydrolase | - |
| FG899_RS07385 () | 1599649..1600149 | - | 501 | WP_004091064.1 | dihydrofolate reductase | - |
| FG899_RS07390 () | 1600258..1601052 | - | 795 | WP_011098074.1 | thymidylate synthase | - |
| FG899_RS07395 () | 1601049..1601954 | - | 906 | WP_004091059.1 | prolipoprotein diacylglyceryl transferase | - |
| FG899_RS07400 () | 1602041..1602421 | - | 381 | WP_004091057.1 | diacylglycerol kinase | - |
| FG899_RS07405 () | 1602716..1603429 | - | 714 | WP_004085858.1 | response regulator transcription factor | - |
| FG899_RS07410 () | 1603909..1605030 | - | 1122 | WP_011098075.1 | prephenate dehydrogenase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|